| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Variovorax sp. SCN45 | GFF85 | | Transcriptional regulator, LysR family | insig. | 100 | 100 |
| o | Dickeya dianthicola 67-19 | HGI48_RS12725 | | LysR family transcriptional regulator | insig. | 42 | 97 |
| o | Serratia liquefaciens MT49 | IAI46_07465 | | LysR family transcriptional regulator | insig. | 44 | 96 |
| | Klebsiella michiganensis M5al | BWI76_RS27965 | | LysR family transcriptional regulator | insig. | 44 | 95 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3985 | | Transcriptional regulator | insig. | 42 | 95 |
| | Enterobacter sp. TBS_079 | MPMX20_00005 | | HTH-type transcriptional regulator PgrR | insig. | 43 | 95 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_02650 | | LysR family transcriptional regulator | insig. | 43 | 96 |
| o | Klebsiella pneumoniae MRSN742743 | KFA93_RS19135 | | LysR family transcriptional regulator | insig. | 43 | 96 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_2945 | | transcriptional regulator, LysR family | insig. | 40 | 96 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2945 | | transcriptional regulator, LysR family | insig. | 40 | 96 |
| | Rhizobium sp. OAE497 | ABIE40_RS14505 | | LysR family transcriptional regulator | insig. | 42 | 98 |
| | Serratia liquefaciens MT49 | IAI46_21735 | | LysR family transcriptional regulator | insig. | 41 | 96 |
| | Acinetobacter baumannii LAC-4 | RR41_RS10935 | | LysR family transcriptional regulator | insig. | 38 | 96 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_989 | | Transcriptional regulator, LysR family | insig. | 39 | 95 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS03175 | | LysR family transcriptional regulator | insig. | 41 | 96 |
| | Ralstonia solanacearum UW163 | UW163_RS10550 | | LysR family transcriptional regulator | insig. | 41 | 96 |
| | Sinorhizobium meliloti 1021 | SMc01817 | | transcriptional regulator | no data | 40 | 98 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS12890 | | LysR family transcriptional regulator | insig. | 43 | 95 |
| | Pseudomonas sp. BP01 | JOY50_RS12325 | | LysR family transcriptional regulator | insig. | 38 | 96 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS05155 | | LysR family transcriptional regulator | insig. | 40 | 95 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05155 | | LysR family transcriptional regulator | insig. | 40 | 95 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS20365 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01223 | | HTH-type transcriptional regulator DmlR | insig. | 40 | 95 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS20290 | | LysR family transcriptional regulator | sig. | 39 | 95 |
| | Paraburkholderia graminis OAS925 | ABIE53_006367 | | DNA-binding transcriptional LysR family regulator | insig. | 34 | 99 |
| | Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 36 | 96 |
| | Paraburkholderia graminis OAS925 | ABIE53_001468 | | DNA-binding transcriptional LysR family regulator | insig. | 38 | 96 |
| | Dickeya dianthicola ME23 | DZA65_RS14535 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 37 | 96 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS01575 | | transcriptional regulator | sig. | 34 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05865 | | transcriptional regulator, LysR family | insig. | 37 | 96 |
| | Pseudomonas sp. BP01 | JOY50_RS28305 | | LysR family transcriptional regulator | no data | 39 | 96 |
| | Serratia liquefaciens MT49 | IAI46_16790 | | LysR family transcriptional regulator | insig. | 37 | 97 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_12455 | | LysR family transcriptional regulator | sig. | 36 | 97 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS35860 | | LysR family transcriptional regulator | sig. | 36 | 97 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF461 | | Transcriptional regulator, LysR family | insig. | 35 | 96 |
| | Variovorax sp. SCN45 | GFF5667 | | Transcriptional regulator, LysR family | insig. | 38 | 91 |
| | Pseudomonas sp. DMC3 | GFF3562 | | HTH-type transcriptional regulator DmlR | insig. | 38 | 96 |
| | Sinorhizobium meliloti 1021 | SMa0039 | | LysR family transcriptional regulator | insig. | 38 | 96 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS04960 | | LysR family transcriptional regulator | sig. | 36 | 97 |
| | Pseudomonas putida KT2440 | PP_3170 | | Transcriptional regulator, LysR family | insig. | 38 | 96 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_21435 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| | Shewanella loihica PV-4 | Shew_2278 | | LysR family transcriptional regulator (RefSeq) | insig. | 33 | 97 |
| | Dickeya dianthicola ME23 | DZA65_RS14555 | | LysR family transcriptional regulator | insig. | 36 | 97 |
| | Shewanella sp. ANA-3 | Shewana3_3800 | | LysR family transcriptional regulator (RefSeq) | insig. | 36 | 93 |
| | Ralstonia solanacearum GMI1000 | RS_RS22475 | | LysR family transcriptional regulator | strong | 35 | 95 |
| | Dechlorosoma suillum PS | Dsui_2023 | | transcriptional regulator | cofit | 34 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS36620 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| | Variovorax sp. SCN45 | GFF7142 | | Transcriptional regulator, LysR family | insig. | 37 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS09305 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Erwinia amylovora T8 | OLJFJH_03270 | | LysR family transcriptional regulator | insig. | 34 | 95 |
| | Variovorax sp. SCN45 | GFF432 | | Probable transcription regulator protein of MDR efflux pump cluster | insig. | 36 | 96 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS02875 | | LysR family transcriptional regulator | insig. | 36 | 92 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS18390 | | LysR family transcriptional regulator | strong | 34 | 95 |
| | Ralstonia solanacearum UW163 | UW163_RS20740 | | LysR family transcriptional regulator | insig. | 34 | 95 |
| | Shewanella oneidensis MR-1 | SO0369 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 36 | 93 |
| | Rahnella sp. WP5 | EX31_RS06010 | | LysR family transcriptional regulator | insig. | 36 | 93 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS02935 | | LysR family transcriptional regulator | insig. | 33 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS02245 | | LysR family transcriptional regulator | insig. | 36 | 95 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS05160 | | LysR family transcriptional regulator | cofit | 34 | 95 |
| | Rahnella sp. WP5 | EX31_RS15470 | | LysR family transcriptional regulator | insig. | 34 | 97 |
| | Rhizobium sp. OAE497 | ABIE40_RS04915 | | LysR family transcriptional regulator | insig. | 37 | 95 |
| | Variovorax sp. OAS795 | ABID97_RS17365 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Variovorax sp. OAS795 | ABID97_RS18085 | | LysR family transcriptional regulator | insig. | 38 | 92 |
| | Shewanella loihica PV-4 | Shew_2292 | | LysR family transcriptional regulator (RefSeq) | insig. | 36 | 98 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS19275 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS08070 | | LysR family transcriptional regulator | insig. | 37 | 97 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS19415 | | LysR family transcriptional regulator | insig. | 35 | 95 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS16205 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| | Pseudomonas sp. RS175 | PFR28_02643 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 91 |
| | Pectobacterium carotovorum WPP14 | HER17_RS10400 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2357 | | transcriptional regulator, LysR family | insig. | 34 | 94 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2357 | | transcriptional regulator, LysR family | insig. | 34 | 94 |
| | Agrobacterium fabrum C58 | Atu4271 | | LysR family transcriptional regulator | insig. | 33 | 98 |
| | Rhizobium sp. OAE497 | ABIE40_RS28275 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1558 | | transcriptional regulator, LysR family | insig. | 35 | 93 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1558 | | transcriptional regulator, LysR family | insig. | 35 | 93 |
| | Pseudomonas sp. DMC3 | GFF1160 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 96 |
| | Serratia liquefaciens MT49 | IAI46_12105 | | LysR family transcriptional regulator | insig. | 35 | 99 |
| | Acinetobacter baumannii LAC-4 | RR41_RS06075 | | multidrug efflux transcriptional repressor AdeL | insig. | 35 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03187 | | transcriptional regulator, LysR family | sig. | 35 | 96 |
| | Rahnella sp. WP5 | EX31_RS10405 | | LysR family transcriptional regulator | insig. | 36 | 98 |
| | Pseudomonas orientalis W4I3 | QF045_RS20290 | | LysR family transcriptional regulator | cofit | 34 | 95 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1549 | | Transcriptional regulator, LysR family | insig. | 36 | 97 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06517 | | DNA-binding transcriptional regulator, LysR family | insig. | 36 | 94 |
| | Klebsiella michiganensis M5al | BWI76_RS03325 | | LysR family transcriptional regulator | insig. | 33 | 97 |
| | Xanthobacter sp. DMC5 | GFF2647 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 95 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_19415 | | LysR family transcriptional regulator | insig. | 35 | 99 |
| | Marinobacter adhaerens HP15 | HP15_936 | | transcriptional regulator, LysR family protein | insig. | 32 | 96 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_29485 | | LysR family transcriptional regulator | insig. | 38 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_259 | | Transcriptional regulator, LysR family | insig. | 36 | 91 |
| | Pseudomonas putida KT2440 | PP_2534 | | Transcriptional regulator, LysR family | insig. | 36 | 97 |
| | Pseudomonas sp. DMC3 | GFF943 | | HTH-type transcriptional regulator DmlR | cofit | 37 | 85 |
| | Pseudomonas sp. SVBP6 | COO64_RS07860 | | LysR family transcriptional regulator | insig. | 37 | 95 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01740 | | HTH-type transcriptional regulator DmlR | insig. | 36 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_02959 | | HTH-type transcriptional regulator DmlR | insig. | 35 | 96 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4694 | | Transcriptional regulator, LysR family | no data | 35 | 96 |
| | Variovorax sp. SCN45 | GFF3537 | | Transcriptional regulator, LysR family | insig. | 44 | 78 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1749 | | Cyn operon transcriptional activator | insig. | 37 | 96 |
| | Pseudomonas sp. RS175 | PFR28_02027 | | HTH-type transcriptional regulator DmlR | insig. | 36 | 96 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21990 | | LysR family transcriptional regulator | insig. | 36 | 91 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS15810 | | LysR family transcriptional regulator | insig. | 34 | 96 |
| | Enterobacter sp. TBS_079 | MPMX20_03531 | | HTH-type transcriptional regulator DmlR | insig. | 35 | 97 |
| | Pantoea sp. MT58 | IAI47_16730 | | LysR family transcriptional regulator | insig. | 34 | 97 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c29160 | | HTH-type transcriptional regulator, LysR family | insig. | 33 | 96 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2751 | | Transcriptional regulator, LysR family | insig. | 33 | 97 |
| | Erwinia amylovora T8 | OLJFJH_06945 | | HTH-type transcriptional activator AaeR | insig. | 32 | 96 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS10630 | | LysR family transcriptional regulator | insig. | 40 | 83 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS24465 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS20090 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Pseudomonas segetis P6 | ACVTMO_RS12405 | | LysR family transcriptional regulator | insig. | 34 | 95 |
| | Pseudomonas sp. RS175 | PFR28_04672 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 96 |
| | Paraburkholderia graminis OAS925 | ABIE53_006445 | | LysR family transcriptional regulator for bpeEF and oprC | insig. | 37 | 96 |
| | Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 36 | 91 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2951 | | transcriptional regulator, LysR family | insig. | 35 | 97 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2951 | | transcriptional regulator, LysR family | insig. | 35 | 97 |
| | Rahnella sp. WP5 | EX31_RS20705 | | LysR family transcriptional regulator | insig. | 33 | 98 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_12520 | | transcriptional regulator | sig. | 39 | 91 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5905 | | Transcriptional regulator, LysR family | insig. | 36 | 85 |
| | Methylophilus sp. DMC18 | GFF2116 | | HTH-type transcriptional regulator PgrR | insig. | 34 | 95 |
| | Pseudomonas putida KT2440 | PP_3811 | | Transcriptional regulator, LysR family | insig. | 36 | 85 |
| | Paraburkholderia graminis OAS925 | ABIE53_004109 | | LysR family transcriptional regulator for bpeEF and oprC | strong | 35 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05378 | | transcriptional regulator, LysR family | insig. | 36 | 96 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS12490 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3857 | | Transcriptional regulator, LysR family | insig. | 37 | 85 |
| | Pseudomonas simiae WCS417 | PS417_14590 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4897 | | Transcriptional regulator, LysR family | insig. | 35 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS27540 | | LysR family transcriptional regulator | insig. | 34 | 97 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS01420 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS33310 | | LysR family transcriptional regulator | insig. | 33 | 97 |
| | Lysobacter sp. OAE881 | ABIE51_RS12770 | | LysR family transcriptional regulator | insig. | 40 | 83 |
| | Pseudomonas orientalis W4I3 | QF045_RS10740 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Pseudomonas orientalis W4I3 | QF045_RS13895 | | LysR family transcriptional regulator | insig. | 36 | 85 |
| | Agrobacterium fabrum C58 | Atu0664 | | transcriptional regulator, LysR family | strong | 35 | 100 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS06700 | | LysR family transcriptional regulator | insig. | 35 | 97 |
| | Ralstonia solanacearum UW163 | UW163_RS06915 | | LysR family transcriptional regulator | insig. | 35 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS22500 | | transcriptional regulator | sig. | 35 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03714 | | transcriptional regulator, LysR family | insig. | 33 | 97 |
| | Sphingobium sp. HT1-2 | GFF124 | | Transcriptional regulator, LysR family | cofit | 38 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39000 | | LysR family transcriptional regulator | insig. | 37 | 88 |
| | Pseudomonas putida KT2440 | PP_4660 | | Transcriptional regulator, LysR family | sig. | 34 | 97 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_2376 | | Transcriptional regulator, LysR family | insig. | 33 | 97 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1366 | | transcriptional regulator, LysR family | insig. | 33 | 95 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1366 | | transcriptional regulator, LysR family | insig. | 33 | 95 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS01585 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| | Pseudomonas sp. BP01 | JOY50_RS04745 | | LysR family transcriptional regulator | insig. | 36 | 85 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS07990 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07990 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS17255 | | LysR family transcriptional regulator | insig. | 35 | 94 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS04895 | | LysR family transcriptional regulator | insig. | 38 | 91 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS35795 | | LysR family transcriptional regulator | insig. | 38 | 91 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02593 | | HTH-type transcriptional regulator DmlR | cofit | 35 | 85 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2741 | | Transcriptional regulator | insig. | 35 | 97 |
| | Pseudomonas sp. S08-1 | OH686_23140 | | Transcriptional regulator, LysR family | insig. | 34 | 96 |
| | Shewanella oneidensis MR-1 | SOA0165 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 30 | 95 |
| | Pseudomonas putida KT2440 | PP_2502 | | Transcriptional regulator, LysR family | insig. | 36 | 98 |
| | Paraburkholderia graminis OAS925 | ABIE53_006193 | | DNA-binding transcriptional LysR family regulator | insig. | 36 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_688 | | Transcriptional regulator, LysR family | insig. | 33 | 96 |
| | Azospirillum brasilense Sp245 | AZOBR_RS16520 | | LysR family transcriptional regulator | insig. | 33 | 96 |
| | Pantoea sp. MT58 | IAI47_20450 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06580 | | DNA-binding transcriptional regulator, LysR family | insig. | 33 | 100 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4411 | | Transcriptional regulator, LysR family | no data | 32 | 97 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12790 | | LysR family transcriptional regulator | insig. | 34 | 96 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_24995 | | LysR family transcriptional regulator | insig. | 33 | 98 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3482.1 | | transcriptional regulator | insig. | 33 | 94 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS26510 | | transcriptional regulator | insig. | 33 | 89 |
| | Variovorax sp. OAS795 | ABID97_RS19260 | | LysR family transcriptional regulator | insig. | 36 | 97 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS13685 | | LysR family transcriptional regulator | insig. | 35 | 95 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1182 | | Transcriptional regulator, LysR family | sig. | 34 | 96 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2480 | | transcriptional regulator, LysR family | insig. | 34 | 97 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2480 | | transcriptional regulator, LysR family | insig. | 34 | 97 |
| | Ralstonia solanacearum GMI1000 | RS_RS21490 | | LysR family transcriptional regulator | insig. | 34 | 99 |
| | Pseudomonas sp. DMC3 | GFF2076 | | HTH-type transcriptional regulator DmlR | insig. | 34 | 96 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1207 | | Transcriptional regulator, LysR family | insig. | 33 | 95 |
| | Pseudomonas putida KT2440 | PP_1164 | | Transcriptional regulator, LysR family | insig. | 36 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS26575 | | LysR family transcriptional regulator | insig. | 36 | 95 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS08130 | | LysR family transcriptional regulator | insig. | 35 | 93 |
| | Pseudomonas sp. BP01 | JOY50_RS23715 | | LysR substrate-binding domain-containing protein | insig. | 34 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS16530 | | LysR family transcriptional regulator | insig. | 34 | 100 |
| | Dechlorosoma suillum PS | Dsui_2353 | | transcriptional regulator | insig. | 34 | 96 |
| | Paraburkholderia graminis OAS925 | ABIE53_003477 | | DNA-binding transcriptional LysR family regulator | insig. | 34 | 100 |
| | Enterobacter sp. TBS_079 | MPMX20_02122 | | HTH-type transcriptional regulator DmlR | sig. | 34 | 95 |
| | Variovorax sp. SCN45 | GFF1801 | | Transcriptional regulator, LysR family | insig. | 34 | 92 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS42300 | gfnR;inference=COORDINATES | glutathione-dependent formaldehyde neutralization regulator | insig. | 33 | 96 |
| | Alteromonas macleodii MIT1002 | MIT1002_03088 | | D-malate degradation protein R | insig. | 31 | 95 |
| | Pseudomonas sp. BP01 | JOY50_RS04615 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22295 | | LysR family transcriptional regulator | insig. | 36 | 85 |
| | Pseudomonas stutzeri RCH2 | Psest_2163 | | Transcriptional regulator | insig. | 35 | 96 |
| | Pseudomonas simiae WCS417 | PS417_08020 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS07880 | | LysR family transcriptional regulator | cofit | 35 | 93 |
| | Pseudomonas stutzeri RCH2 | Psest_2817 | | Transcriptional regulator | insig. | 35 | 94 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04237 | | transcriptional regulator, LysR family | insig. | 34 | 100 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16575 | | LysR family transcriptional regulator | insig. | 34 | 96 |
| | Dickeya dianthicola 67-19 | HGI48_RS19010 | | LysR family transcriptional regulator | insig. | 34 | 95 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS14825 | gfnR;inference=COORDINATES | glutathione-dependent formaldehyde neutralization regulator | insig. | 33 | 96 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_5137 | | Transcriptional regulator, LysR family | insig. | 33 | 95 |
| | Acinetobacter radioresistens SK82 | MPMX26_03002 | | HTH-type transcriptional regulator DmlR | insig. | 32 | 97 |
| | Acinetobacter baumannii LAC-4 | RR41_RS00210 | | LysR family transcriptional regulator | insig. | 31 | 95 |
| | Pseudomonas sp. S08-1 | OH686_22430 | | Transcriptional regulator, LysR family | cofit | 37 | 84 |
| | Xanthobacter sp. DMC5 | GFF3690 | | HTH-type transcriptional regulator DmlR | insig. | 36 | 98 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS03985 | | LysR family transcriptional regulator | insig. | 36 | 85 |
| | Pseudomonas sp. BP01 | JOY50_RS02065 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Pseudomonas simiae WCS417 | PS417_16085 | | LysR family transcriptional regulator | insig. | 35 | 85 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS20745 | | LysR family transcriptional regulator | insig. | 35 | 95 |
| | Shewanella amazonensis SB2B | Sama_0005 | | LysR, substrate-binding (RefSeq) | insig. | 34 | 82 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_10290 | | LysR family transcriptional regulator | insig. | 34 | 96 |
| | Pseudomonas sp. RS175 | PFR28_00419 | | HTH-type transcriptional regulator DmlR | strong | 34 | 97 |
| | Variovorax sp. OAS795 | ABID97_RS22315 | | LysR family transcriptional regulator | insig. | 34 | 92 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_13385 | lysR | LysR family transcriptional regulator | insig. | 34 | 96 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS08890 | | LysR family transcriptional regulator | cofit | 33 | 97 |
| | Sinorhizobium meliloti 1021 | SMc01092 | | transcriptional regulator | insig. | 33 | 97 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_18535 | | glutathione-dependent formaldehyde neutralization regulator | insig. | 32 | 96 |
| | Bosea sp. OAE506 | ABIE41_RS22155 | | LysR family transcriptional regulator | insig. | 37 | 99 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS05310 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Acinetobacter baumannii LAC-4 | RR41_RS11105 | | LysR family transcriptional regulator | insig. | 35 | 83 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS01140 | | LysR family transcriptional regulator | cofit | 35 | 97 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04909 | | transcriptional regulator, LysR family | insig. | 35 | 93 |
| | Pseudomonas sp. RS175 | PFR28_01795 | | HTH-type transcriptional regulator PgrR | insig. | 34 | 96 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5001 | | Chromosome initiation inhibitor | insig. | 34 | 96 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4683 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 33 | 97 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01435 | | HTH-type transcriptional regulator DmlR | cofit | 33 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS20610 | | LysR family transcriptional regulator | insig. | 33 | 97 |
| | Enterobacter sp. TBS_079 | MPMX20_00940 | | HTH-type transcriptional regulator DmlR | insig. | 35 | 84 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_05040 | | LysR family transcriptional regulator | insig. | 34 | 97 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS12290 | | LysR family transcriptional regulator | insig. | 34 | 97 |
| | Pseudomonas putida KT2440 | PP_1615 | | Transcriptional regulator, LysR family | strong | 34 | 96 |
| | Dickeya dadantii 3937 | DDA3937_RS09005 | | LysR family transcriptional regulator | insig. | 33 | 95 |
| | Pseudomonas sp. RS175 | PFR28_02938 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 86 |
| | Sinorhizobium meliloti 1021 | SMc00831 | | transcriptional regulator | insig. | 35 | 100 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3107 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 34 | 96 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3188 | | transcriptional regulator, LysR family | insig. | 32 | 96 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3188 | | transcriptional regulator, LysR family | insig. | 32 | 96 |
| | Azospirillum brasilense Sp245 | AZOBR_RS27910 | | LysR family transcriptional regulator | insig. | 35 | 89 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_23640 | | LysR family transcriptional regulator | insig. | 35 | 95 |
| | Rahnella sp. WP5 | EX31_RS16730 | | LysR family transcriptional regulator | insig. | 34 | 96 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_14945 | lysR | LysR family transcriptional regulator | insig. | 34 | 93 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS15095 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5325 | | Transcriptional regulator, LysR family | insig. | 35 | 97 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS02605 | | LysR family transcriptional regulator | insig. | 35 | 89 |
| | Pseudomonas sp. SVBP6 | COO64_RS19755 | | LysR substrate-binding domain-containing protein | insig. | 33 | 96 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1429 | | Transcriptional regulator, LysR family | insig. | 33 | 97 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_28465 | | LysR family transcriptional regulator | insig. | 34 | 96 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18050 | | LysR family transcriptional regulator | insig. | 34 | 85 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18050 | | LysR family transcriptional regulator | insig. | 34 | 85 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_19120 | | LysR family transcriptional regulator | insig. | 34 | 95 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS19670 | | LysR family transcriptional regulator | insig. | 34 | 95 |
| | Azospirillum sp. SherDot2 | MPMX19_03275 | | HTH-type transcriptional regulator PgrR | insig. | 34 | 94 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS08390 | | LysR family transcriptional regulator | insig. | 34 | 96 |
| | Pseudomonas sp. RS175 | PFR28_02363 | | HTH-type transcriptional regulator DmlR | insig. | 33 | 96 |
| | Pseudomonas sp. DMC3 | GFF4932 | | HTH-type transcriptional regulator DmlR | cofit | 32 | 97 |