Homologs of GFF6705 from Variovorax sp. SCN45

hypothetical protein
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Variovorax sp. SCN45	GFF6705		hypothetical protein	insig.	100	100
o	Acidovorax sp. GW101-3H11	Ac3H11_1193		RNA polymerase ECF-type sigma factor	insig.	45	98
	Ralstonia sp. UNC404CL21Col	ABZR87_RS05500		RNA polymerase sigma-70 factor	strong	46	60
	Paraburkholderia sabiae LMG 24235	QEN71_RS02865		sigma-70 family RNA polymerase sigma factor	insig.	40	77
	Paraburkholderia sabiae LMG 24235	QEN71_RS31540		RNA polymerase sigma-70 factor	insig.	37	86
	Burkholderia phytofirmans PsJN	BPHYT_RS11635		RNA polymerase subunit sigma-24	insig.	39	75
	Acidovorax sp. GW101-3H11	Ac3H11_4965		RNA polymerase ECF-type sigma factor	insig.	43	58
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_04104		RNA polymerase sigma-70 factor, ECF subfamily	insig.	44	61
	Ralstonia solanacearum PSI07	RPSI07_RS23355		RNA polymerase sigma-70 factor	insig.	45	63
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_01268		RNA polymerase sigma-70 factor, ECF subfamily	insig.	37	76
	Paraburkholderia graminis OAS925	ABIE53_003338		RNA polymerase sigma factor (sigma-70 family)	sig.	40	74
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS01610		RNA polymerase sigma-70 factor	insig.	39	81
	Herbaspirillum seropedicae SmR1	HSERO_RS00750		RNA polymerase subunit sigma-24	insig.	36	84
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF235		Putative RNA polymerase sigma factor	insig.	44	59
	Variovorax sp. SCN45	GFF5440		RNA polymerase ECF-type sigma factor	insig.	45	56
	Paraburkholderia graminis OAS925	ABIE53_004797		RNA polymerase sigma-70 factor (ECF subfamily)	insig.	42	59
	Variovorax sp. OAS795	ABID97_RS02030		RNA polymerase sigma-70 factor	insig.	42	58
	Lysobacter sp. OAE881	ABIE51_RS11095		RNA polymerase sigma-70 factor	insig.	42	58
	Rhodanobacter denitrificans MT42	LRK55_RS14775		RNA polymerase sigma factor SigJ	insig.	38	75
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS15060		RNA polymerase sigma factor SigJ	insig.	38	75
	Lysobacter sp. OAE881	ABIE51_RS08425		RNA polymerase sigma-70 factor	insig.	34	75
	Burkholderia phytofirmans PsJN	BPHYT_RS15835		RNA polymerase subunit sigma24	insig.	33	88
	Rhodanobacter sp. FW510-T8	OKGIIK_03820		RNA polymerase sigma-70 factor, ECF subfamily	insig.	44	58
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS00750		RNA polymerase sigma factor SigJ	insig.	35	91
	Mycobacterium tuberculosis H37Rv	Rv3328c		Probable alternative RNA polymerase sigma factor (fragment) SigJ	insig.	36	65
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_4523		RNA polymerase sigma-70 factor, ECF subfamily	insig.	29	84
	Rhodopseudomonas palustris CGA009	TX73_005735		sigma-70 family RNA polymerase sigma factor	insig.	36	55
	Pseudomonas fluorescens GW456-L13	PfGW456L13_3501		RNA polymerase sigma-70 factor, ECF subfamily	insig.	35	63
	Azospirillum sp. SherDot2	MPMX19_00243		ECF RNA polymerase sigma factor SigJ	insig.	39	59
	Sphingobium sp. HT1-2	GFF1476		RNA polymerase ECF-type sigma factor	insig.	34	56
	Caulobacter crescentus NA1000	CCNA_03375		RNA polymerase sigma-J factor	strong	35	60
	Caulobacter crescentus NA1000 Δfur	CCNA_03375		RNA polymerase sigma-J factor	cofit	35	60
	Sinorhizobium meliloti 1021	SM_b20030		RNA polymerase sigma factor SigJ	insig.	32	74
	Magnetospirillum magneticum AMB-1	AMB_RS17600		DNA-directed RNA polymerase specialized sigma subunit	cofit	39	52
	Sphingomonas koreensis DSMZ 15582	Ga0059261_3435		RNA polymerase sigma factor, sigma-70 family	insig.	33	59
	Phocaeicola dorei CL03T12C01	ABI39_RS03560		RNA polymerase sigma factor	insig.	30	60
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS09175		RNA polymerase sigma factor	sig.	30	60
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_2880		RNA polymerase sigma factor, sigma-70 family	insig.	27	83
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS12120		RNA polymerase sigma factor	strong	32	58
	Mycobacterium tuberculosis H37Rv	Rv1189		Possible alternative RNA polymerase sigma factor SigI	no data	30	72
	Phocaeicola dorei CL03T12C01	ABI39_RS04680		RNA polymerase sigma factor	insig.	32	58
	Pseudomonas segetis P6	ACVTMO_RS03680		sigma-70 family RNA polymerase sigma factor	insig.	35	51
	Pseudomonas simiae WCS417	PS417_00670		RNA polymerase sigma factor	sig.	31	52
	Phaeobacter inhibens DSM 17395	PGA1_c28920		'RNA polymerase sigma factor (sigma-70 family; ECF41 subgroup)'	insig.	27	82
	Mycobacterium tuberculosis H37Rv	Rv1221		Alternative RNA polymerase sigma factor SigE	insig.	30	56
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS06415		RNA polymerase sigma factor	insig.	29	58
	Azospirillum sp. SherDot2	MPMX19_03088		putative RNA polymerase sigma factor FecI	insig.	36	55
	Pseudomonas sp. RS175	PFR28_00232		putative RNA polymerase sigma factor FecI	insig.	31	52
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_5307		FIG006045: Sigma factor, ECF subfamily	strong	31	52
	Azospirillum sp. SherDot2	MPMX19_05475		hypothetical protein	no data	37	43
	Pseudomonas stutzeri RCH2	Psest_3456		RNA polymerase sigma factor, sigma-70 family	insig.	34	55
	Azospirillum brasilense Sp245	AZOBR_RS26615		RNA polymerase	insig.	35	57
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_0865		RNA polymerase sigma factor, sigma-70 family	insig.	25	57
	Pseudomonas sp. BP01	JOY50_RS01650		sigma-70 family RNA polymerase sigma factor	insig.	32	56
	Pseudomonas fluorescens FW300-N2C3	AO356_16910		RNA polymerase subunit sigma	insig.	31	52
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_604		FIG006045: Sigma factor, ECF subfamily	insig.	29	57
	Bacteroides ovatus ATCC 8483	BACOVA_01909		Sigma-70 region 2	sig.	30	58
	Pseudomonas sp. RS175	PFR28_00559		ECF RNA polymerase sigma factor SigE	insig.	29	58
	Pseudomonas aeruginosa MRSN321	DY961_RS20570	sigX;inference=COORDINATES	RNA polymerase sigma factor SigX	no data	28	56
	Pseudomonas aeruginosa PA14	IKLFDK_08585		RNA polymerase sigma factor SigX	no data	28	56
	Pseudomonas aeruginosa PUPa3	DQ20_RS54650	sigX;inference=COORDINATES	RNA polymerase sigma factor SigX	no data	28	56
	Azospirillum brasilense Sp245	AZOBR_RS27315		RNA polymerase sigma 70	insig.	36	55
	Rhodospirillum rubrum S1H	Rru_A2397		Sigma-24 (FecI) (NCBI)	insig.	32	58
	Pseudomonas sp. DMC3	GFF5154		hypothetical protein	insig.	30	51
	Herbaspirillum seropedicae SmR1	HSERO_RS11705		extracytoplasmic-function sigma-70 factor	insig.	34	36
	Kangiella aquimarina DSM 16071	B158DRAFT_0015		RNA polymerase sigma factor, sigma-70 family	insig.	32	54
	Pseudomonas fluorescens FW300-N2C3	AO356_02795		RNA polymerase subunit sigma	no data	29	57
	Pseudomonas syringae pv. syringae B728a	Psyr_2096		Sigma-70 region 2	no data	29	57
	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_2096		Sigma-70 region 2	no data	29	57
	Pseudomonas simiae WCS417	PS417_22700		RNA polymerase subunit sigma-24	strong	30	58
	Pseudomonas putida KT2440	PP_2088		RNA polymerase sigma factor SigX	strong	28	57
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS16105		sigma-70 family RNA polymerase sigma factor	insig.	26	57
	Pseudomonas sp. SVBP6	COO64_RS25100		sigma-70 family RNA polymerase sigma factor	insig.	36	47
	Pseudomonas sp. BP01	JOY50_RS22140	sigX	RNA polymerase sigma factor SigX	insig.	28	57
	Pseudomonas sp. SVBP6	COO64_RS05350	sigX	RNA polymerase sigma factor SigX	no data	28	57
	Pseudomonas sp. RS175	PFR28_01023		hypothetical protein	sig.	34	48
	Pseudomonas fluorescens FW300-N2C3	AO356_02895		RNA polymerase subunit sigma-70	strong	34	48
	Pseudomonas aeruginosa MRSN321	DY961_RS27025		RNA polymerase sigma factor	insig.	31	58
	Pseudomonas aeruginosa PUPa3	DQ20_RS31565		RNA polymerase sigma factor	sig.	31	58
	Pseudomonas sp. DMC3	GFF4554		hypothetical protein	cofit	31	64
	Pseudomonas aeruginosa PA14	IKLFDK_24795		RNA polymerase sigma factor	insig.	31	58
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_2900		FIG006045: Sigma factor, ECF subfamily	insig.	29	57
	Pseudomonas fluorescens FW300-N2E3	AO353_00830		RNA polymerase subunit sigma	no data	28	57
	Bacteroides thetaiotaomicron VPI-5482	BT3396		RNA polymerase ECF-type sigma factor (NCBI ptt file)	strong	29	58
	Pseudomonas putida KT2440	PP_4244		alternative sigma factor	sig.	34	44
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_1008		FIG006045: Sigma factor, ECF subfamily	insig.	33	52
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_2404		Sigma factor PvdS, controling pyoverdin biosynthesis	sig.	35	42
	Pseudomonas fluorescens GW456-L13	PfGW456L13_2293		Sigma factor PvdS, controling pyoverdin biosynthesis	insig.	31	61
	Pseudomonas aeruginosa MRSN321	DY961_RS18585	pvdS;inference=COORDINATES	pyoverdine signaling pathway sigma factor PvdS	insig.	30	64
	Pseudomonas aeruginosa PA14	IKLFDK_11920		pyoverdine signaling pathway sigma factor PvdS	sig.	30	64
	Pseudomonas aeruginosa PUPa3	DQ20_RS59800	pvdS;inference=COORDINATES	pyoverdine signaling pathway sigma factor PvdS	insig.	30	64
	Pseudomonas fluorescens GW456-L13	PfGW456L13_1886		FIG006045: Sigma factor, ECF subfamily	insig.	30	52
	Cellulophaga baltica 18	M666_RS00810		sigma-70 family RNA polymerase sigma factor	insig.	28	53
	Pseudomonas lactucae CFBP13502	GEMAOFIL_01226		putative RNA polymerase sigma factor FecI	cofit	32	52
	Pseudomonas fluorescens SBW25	PFLU_RS05190		RNA polymerase sigma factor	insig.	31	63
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS05190		RNA polymerase sigma factor	insig.	31	63
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_0726		RNA polymerase sigma factor, sigma-70 family	insig.	30	58
	Azospirillum brasilense Sp245	AZOBR_RS30810		RNA polymerase sigma70	insig.	29	64
	Pseudomonas orientalis W4I3	QF045_RS22815		RNA polymerase sigma factor SigX	strong	28	57
	Variovorax sp. SCN45	GFF2431		RNA polymerase ECF-type sigma factor	insig.	33	52