Homologs of PS417_23450 from Pseudomonas simiae WCS417

membrane protein
SEED: CidA-associated membrane protein CidB

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_23450 membrane protein insig. 100 100
o Pseudomonas sp. SVBP6 COO64_RS03610 LrgB family protein insig. 83 100
o Pseudomonas sp. BP01 JOY50_RS15575 LrgB family protein insig. 82 100
o Pseudomonas aeruginosa MRSN321 DY961_RS15770 LrgB family protein sig. 66 100
o Pseudomonas aeruginosa PA14 IKLFDK_17615 LrgB-like family insig. 66 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS41310 LrgB family protein insig. 66 100
o Pseudomonas putida KT2440 PP_4625 anti-holin regulator of holin CidA insig. 81 94
o Xanthobacter sp. DMC5 GFF700 Inner membrane protein YohK insig. 57 97
o Escherichia fergusonii Becca EFB2_04523 Inner membrane protein YohK insig. 41 100
o Escherichia coli Nissle 1917 ECOLIN_RS23535 LrgB family protein insig. 41 100
o Rahnella sp. WP5 EX31_RS12135 LrgB family protein insig. 39 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS21060 LrgB family protein cofit 40 100
o Klebsiella michiganensis M5al BWI76_RS02055 murein hydrolase effector protein LrgB insig. 40 98
o Pantoea sp. MT58 IAI47_17735 LrgB family protein insig. 39 100
o Serratia liquefaciens MT49 IAI46_22820 LrgB family protein insig. 43 85
o Enterobacter sp. TBS_079 MPMX20_00288 Inner membrane protein YohK sig. 40 96
o Enterobacter asburiae PDN3 EX28DRAFT_4235 Putative effector of murein hydrolase insig. 40 96
o Shewanella loihica PV-4 Shew_0830 LrgB family protein (RefSeq) insig. 44 93
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1449 CidA-associated membrane protein CidB insig. 40 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS28735 LrgB family protein insig. 46 94
o Erwinia amylovora T8 OLJFJH_03355 murein hydrolase effector protein LrgB insig. 40 92
o Klebsiella pneumoniae MKP103 KDGMDA_10525 murein hydrolase effector protein LrgB insig. 40 94
o Acinetobacter radioresistens SK82 MPMX26_01609 Holin-like protein CidB insig. 40 92
o Vibrio cholerae E7946 ATCC 55056 CSW01_10495 LrgB family protein insig. 42 90
o Cupriavidus basilensis FW507-4G11 RR42_RS27570 murein hydrolase effector protein insig. 42 94
  Paraburkholderia graminis OAS925 ABIE53_005942 putative murein hydrolase (TIGR00659 family) insig. 39 96
o Burkholderia phytofirmans PsJN BPHYT_RS32345 LrgB family protein insig. 38 96
o Acinetobacter baumannii LAC-4 RR41_RS11355 LrgB family protein insig. 37 92
  Marinobacter adhaerens HP15 HP15_2943 LrgB family protein sig. 36 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02851 TIGR00659 family protein no data 38 97
  Herbaspirillum seropedicae SmR1 HSERO_RS14495 membrane protein insig. 37 97
  Azospirillum brasilense Sp245 AZOBR_RS12150 membrane protein insig. 40 96
o Shewanella amazonensis SB2B Sama_2926 hypothetical protein (RefSeq) strong 42 93
  Magnetospirillum magneticum AMB-1 AMB_RS06665 LrgB family protein insig. 37 93
  Pseudomonas aeruginosa MRSN321 DY961_RS12790 LrgB family protein strong 39 97
  Pseudomonas aeruginosa PA14 IKLFDK_20695 LrgB-like family strong 39 97
  Pseudomonas aeruginosa PUPa3 DQ20_RS48120 LrgB family protein strong 39 97
o Shewanella sp. ANA-3 Shewana3_0886 LrgB family protein (RefSeq) insig. 38 93
  Burkholderia phytofirmans PsJN BPHYT_RS26565 membrane protein no data 38 96
o Shewanella oneidensis MR-1 SO1048 membrane protein, putative (NCBI ptt file) sig. 38 92
  Fusobacterium nucleatum SB010 HUW76_07690 LrgB family protein cofit 30 96
  Pseudomonas segetis P6 ACVTMO_RS12475 LrgB family protein insig. 35 97
  Pseudomonas stutzeri RCH2 Psest_1573 Putative effector of murein hydrolase no data 38 89
  Pseudomonas syringae pv. syringae B728a Psyr_0637 LrgB-like protein insig. 37 95
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0637 LrgB-like protein insig. 37 95
  Pseudomonas sp. S08-1 OH686_09360 LrgA-associated membrane protein LrgB strong 37 93
  Klebsiella michiganensis M5al BWI76_RS19605 CidB/LrgB family autolysis modulator strong 33 94
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04920 LrgB family protein insig. 31 96
  Klebsiella pneumoniae MKP103 KDGMDA_26585 CidB/LrgB family autolysis modulator insig. 33 95
  Bacteroides thetaiotaomicron VPI-5482 BT3690 putative membrane protein (NCBI ptt file) strong 32 100
  Dinoroseobacter shibae DFL-12 Dshi_0156 LrgB family protein (RefSeq) sig. 37 97
  Pseudomonas stutzeri RCH2 Psest_0505 Putative effector of murein hydrolase sig. 34 93
  Pseudomonas segetis P6 ACVTMO_RS05165 LrgB family protein insig. 36 97
  Escherichia coli ECRC100 OKFHMN_23575 yohK CidB/LrgB family autolysis modulator insig. 32 95
  Escherichia coli ECRC101 MCAODC_14625 yohK CidB/LrgB family autolysis modulator strong 32 95
  Escherichia coli ECRC102 NIAGMN_21340 yohK CidB/LrgB family autolysis modulator insig. 32 95
  Escherichia coli ECRC98 JDDGAC_27530 yohK CidB/LrgB family autolysis modulator strong 32 95
  Escherichia coli ECRC99 KEDOAH_04610 yohK CidB/LrgB family autolysis modulator no data 32 95
  Rhodospirillum rubrum S1H Rru_A2427 LrgB-like protein (NCBI) insig. 35 93
  Pseudomonas fluorescens FW300-N2C3 AO356_15270 hypothetical protein strong 36 97
  Variovorax sp. OAS795 ABID97_RS17375 LrgB family protein insig. 35 92
  Escherichia coli BL21 ECD_02071 LrgB family inner membrane protein insig. 32 95
  Escherichia fergusonii Becca EFB2_01714 Inner membrane protein YohK sig. 32 95
  Escherichia coli ECOR27 NOLOHH_15145 yohK CidB/LrgB family autolysis modulator insig. 32 95
  Escherichia coli ECOR38 HEPCGN_22840 yohK CidB/LrgB family autolysis modulator insig. 32 95
  Escherichia coli ECRC62 BNILDI_14065 yohK CidB/LrgB family autolysis modulator insig. 32 95
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01569 Inner membrane protein YohK insig. 32 95
  Escherichia coli BW25113 b2142 yohK predicted inner membrane protein (NCBI) strong 32 95
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08495 LrgB family protein insig. 31 100
  Pseudomonas sp. RS175 PFR28_03876 Inner membrane protein YohK strong 34 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS05510 LrgB family protein insig. 36 96
  Ralstonia solanacearum UW163 UW163_RS08115 LrgB family protein insig. 36 96
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4989 LrgA-associated membrane protein LrgB strong 36 97
  Bacteroides ovatus ATCC 8483 BACOVA_03497 putative TIGR00659 family protein insig. 32 100
  Phocaeicola dorei CL03T12C01 ABI39_RS02720 LrgB family protein insig. 31 100
  Escherichia coli Nissle 1917 ECOLIN_RS12540 CidB/LrgB family autolysis modulator insig. 32 95
  Erwinia amylovora T8 OLJFJH_11880 Inner membrane protein yohK insig. 32 98
  Enterobacter asburiae PDN3 EX28DRAFT_0413 TIGR00659 family protein insig. 31 95
  Enterobacter sp. TBS_079 MPMX20_03114 Inner membrane protein YohK strong 31 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3796 LrgA-associated membrane protein LrgB insig. 31 96
  Pectobacterium carotovorum WPP14 HER17_RS13480 CidB/LrgB family autolysis modulator cofit 32 96
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00865 CidB/LrgB family autolysis modulator cofit 31 97
  Pseudomonas sp. DMC3 GFF3867 Inner membrane protein YohK cofit 34 95
  Ralstonia solanacearum GMI1000 RS_RS13370 LrgB family protein insig. 40 96
  Dickeya dianthicola 67-19 HGI48_RS08080 CidB/LrgB family autolysis modulator insig. 33 97
  Erwinia tracheiphila SCR3 LU632_RS08560 CidB/LrgB family autolysis modulator insig. 32 92
  Rahnella sp. WP5 EX31_RS11260 CidB/LrgB family autolysis modulator insig. 29 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2683 LrgA-associated membrane protein LrgB strong 34 95
  Dickeya dadantii 3937 DDA3937_RS07225 CidB/LrgB family autolysis modulator insig. 33 97
  Bacteroides stercoris CC31F HMPREF1181_RS03185 LrgB family protein cofit 31 100
  Pantoea sp. MT58 IAI47_06765 CidB/LrgB family autolysis modulator insig. 30 97
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_18670 CidB/LrgB family autolysis modulator cofit 31 92
  Dickeya dianthicola ME23 DZA65_RS08675 CidB/LrgB family autolysis modulator insig. 33 97
  Cupriavidus basilensis FW507-4G11 RR42_RS17325 membrane protein insig. 38 92
  Ralstonia solanacearum PSI07 RPSI07_RS11790 LrgB family protein insig. 39 96
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1351 LrgA-associated membrane protein LrgB sig. 35 95
  Vibrio cholerae E7946 ATCC 55056 CSW01_06230 LrgB family protein insig. 30 95
  Pseudomonas sp. BP01 JOY50_RS17660 LrgB family protein insig. 34 97
  Methylophilus sp. DMC18 GFF2279 Antiholin-like protein LrgB insig. 32 96
  Pseudomonas sp. SVBP6 COO64_RS15650 LrgB family protein insig. 34 97