| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas simiae WCS417 | PS417_20945 | | transcriptional regulator | insig. | 100 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS22560 | | transcriptional regulator | insig. | 76 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS22560 | | transcriptional regulator | insig. | 76 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04334 | | hypothetical protein | insig. | 73 | 96 |
| o | Pseudomonas orientalis W4I3 | QF045_RS22755 | | winged helix-turn-helix domain-containing protein | no data | 67 | 89 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_02660 | | invasion protein regulator | insig. | 50 | 78 |
| | Pseudomonas orientalis W4I3 | QF045_RS19660 | | winged helix-turn-helix domain-containing protein | insig. | 44 | 84 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4742 | | Type III secretion transcriptional activator HilA | cofit | 47 | 69 |
| | Escherichia coli ECOR38 | HEPCGN_13965 | eilA | HilA family transcriptional regulator EilA | insig. | 37 | 84 |
| | Escherichia coli ECRC100 | OKFHMN_19865 | ygeH | HilA family transcriptional regulator YgeH | insig. | 48 | 63 |
| | Escherichia coli ECRC101 | MCAODC_10390 | ygeH | HilA family transcriptional regulator YgeH | insig. | 48 | 63 |
| | Escherichia coli ECRC102 | NIAGMN_17635 | ygeH | HilA family transcriptional regulator YgeH | insig. | 48 | 63 |
| | Escherichia coli ECRC99 | KEDOAH_08265 | ygeH | HilA family transcriptional regulator YgeH | no data | 48 | 63 |
| | Escherichia coli ECRC98 | JDDGAC_23530 | | winged helix-turn-helix domain-containing protein | no data | 48 | 63 |
| | Escherichia coli ECOR27 | NOLOHH_11750 | ygeH | HilA family transcriptional regulator YgeH | insig. | 47 | 63 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00874 | | Transcriptional regulator HilA | insig. | 47 | 63 |
| | Escherichia coli BW25113 | b2852 | ygeH | predictedtranscriptional regulator (NCBI) | no data | 47 | 63 |
| | Lysobacter sp. OAE881 | ABIE51_RS10700 | | winged helix-turn-helix domain-containing protein | insig. | 42 | 60 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37450 | | winged helix-turn-helix domain-containing protein | insig. | 36 | 60 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01106 | | Predicted ATPase | no data | 37 | 57 |
| | Paraburkholderia graminis OAS925 | ABIE53_002241 | | putative ATPase/DNA-binding winged helix-turn-helix (wHTH) protein | insig. | 35 | 63 |
| | Shewanella oneidensis MR-1 | SO0490 | | transcriptional regulator (NCBI ptt file) | insig. | 45 | 56 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01093 | | transcriptional regulator, winged helix family | insig. | 31 | 66 |
| | Paraburkholderia graminis OAS925 | ABIE53_002254 | | putative ATPase/DNA-binding winged helix-turn-helix (wHTH) protein | insig. | 38 | 54 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0346 | | DNA-binding winged-HTH domains | insig. | 41 | 63 |
| | Shewanella sp. ANA-3 | Shewana3_0499 | | transcriptional regulator (RefSeq) | cofit | 43 | 56 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30420 | | transcriptional regulator | insig. | 35 | 57 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03403 | | Predicted ATPase | insig. | 39 | 60 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2357 | | Invasion protein iagA | insig. | 66 | 27 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37415 | | winged helix-turn-helix domain-containing protein | insig. | 35 | 57 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1060 | | Adenylate cyclase (EC 4.6.1.1) | insig. | 39 | 64 |
| | Shewanella amazonensis SB2B | Sama_0430 | | putative transcriptional regulator, CadC (RefSeq) | insig. | 34 | 79 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30355 | | transcriptional regulator | insig. | 35 | 56 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00036 | | DNA-binding winged helix-turn-helix (wHTH) domain-containing protein | insig. | 35 | 56 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21955 | | transcriptional regulator | insig. | 33 | 73 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5489 | | TPR domain protein, putative component of TonB system | insig. | 37 | 62 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37405 | | winged helix-turn-helix domain-containing protein | insig. | 30 | 67 |
| | Paraburkholderia graminis OAS925 | ABIE53_006060 | | DNA-binding winged helix-turn-helix (wHTH) protein/predicted ATPase | sig. | 33 | 75 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_252 | | Disease resistance protein / Tetratricopeptide repeat-containing protein | insig. | 32 | 73 |
| | Pseudomonas sp. RS175 | PFR28_02650 | | hypothetical protein | insig. | 32 | 73 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5712 | | Adenylate cyclase (EC 4.6.1.1) / Guanylate cyclase (EC 4.6.1.2) | insig. | 38 | 69 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_2932 | | Serine/threonine protein kinase | insig. | 41 | 59 |
| | Pseudomonas simiae WCS417 | PS417_16115 | | transcriptional regulator | insig. | 32 | 71 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3869 | | Disease resistance protein / Tetratricopeptide repeat-containing protein | insig. | 31 | 77 |
| | Pseudomonas sp. DMC3 | GFF2809 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | insig. | 38 | 50 |
| | Rhizobium sp. OAE497 | ABIE40_RS26115 | | tetratricopeptide repeat protein | insig. | 32 | 61 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18085 | | helix-turn-helix transcriptional regulator | insig. | 32 | 71 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18085 | | helix-turn-helix transcriptional regulator | insig. | 32 | 71 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_1284 | | DNA-binding winged-HTH domains | insig. | 32 | 67 |
| | Shewanella sp. ANA-3 | Shewana3_2755 | | transcriptional regulator (RefSeq) | insig. | 29 | 75 |
| | Pseudomonas sp. RS175 | PFR28_02328 | | Transcriptional regulatory protein QseB | sig. | 42 | 55 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1539 | | Two-component system response regulator QseB | insig. | 42 | 55 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c13010 | | two-component system response regulator | insig. | 38 | 57 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4454 | | Two-component system response regulator QseB | no data | 42 | 55 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_23845 | | XRE family transcriptional regulator | insig. | 42 | 55 |
| | Pseudomonas sp. DMC3 | GFF3603 | | Transcriptional regulatory protein QseB | cofit | 42 | 55 |
| | Pseudomonas orientalis W4I3 | QF045_RS13865 | | winged helix-turn-helix domain-containing protein | insig. | 32 | 71 |
| | Lysobacter sp. OAE881 | ABIE51_RS11155 | | response regulator | insig. | 32 | 74 |
| | Pseudomonas sp. SVBP6 | COO64_RS20755 | | response regulator | insig. | 40 | 58 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS21025 | | response regulator transcription factor | insig. | 32 | 78 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02633 | | hypothetical protein | cofit | 32 | 71 |
| | Pseudomonas simiae WCS417 | PS417_13595 | | XRE family transcriptional regulator | insig. | 42 | 54 |
| | Pseudomonas sp. DMC3 | GFF1652 | | Transcriptional regulatory protein OmpR | no data | 30 | 77 |
| | Shewanella loihica PV-4 | Shew_0358 | | transcriptional regulator, CadC (RefSeq) | insig. | 40 | 62 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30635 | | winged helix-turn-helix domain-containing protein | insig. | 32 | 56 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS10810 | | response regulator transcription factor | insig. | 30 | 76 |
| | Acinetobacter baumannii LAC-4 | RR41_RS06150 | | response regulator transcription factor | insig. | 41 | 56 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3169 | | Two-component system response regulator QseB | insig. | 41 | 55 |
| | Lysobacter sp. OAE881 | ABIE51_RS06860 | | winged helix-turn-helix domain-containing protein | insig. | 37 | 60 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5919 | | Signal transduction response regulator / Tetratricopeptide repeat-containing protein | insig. | 31 | 75 |
| | Pseudomonas sp. DMC3 | GFF933 | | hypothetical protein | cofit | 30 | 72 |
| | Shewanella amazonensis SB2B | Sama_0607 | | putative transcriptional regulator, CadC (RefSeq) | insig. | 34 | 63 |
| | Shewanella oneidensis MR-1 | SO1699 | | transcriptional regulator (NCBI ptt file) | insig. | 28 | 75 |
| | Xanthobacter sp. DMC5 | GFF2161 | | Transcriptional regulatory protein OmpR | insig. | 33 | 71 |
| | Lysobacter sp. OAE881 | ABIE51_RS17505 | | winged helix-turn-helix domain-containing protein | strong | 29 | 63 |
| | Shewanella amazonensis SB2B | Sama_2749 | | putative transcriptional regulator, CadC (RefSeq) | insig. | 35 | 65 |
| | Enterobacter sp. TBS_079 | MPMX20_02281 | | Transcriptional regulatory protein OmpR | insig. | 31 | 71 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS27980 | bfmR;inference=COORDINATES | two-component system response regulator BfmR | insig. | 30 | 74 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS47655 | bfmR;inference=COORDINATES | two-component system response regulator BfmR | insig. | 30 | 74 |
| | Pseudomonas sp. RS175 | PFR28_01763 | | Transcriptional regulatory protein OmpR | insig. | 30 | 77 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1185 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | insig. | 31 | 73 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3794 | | Transcriptional regulatory protein ompR | insig. | 30 | 74 |
| | Pseudomonas sp. DMC3 | GFF580 | | Transcriptional regulatory protein CseB | insig. | 37 | 59 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS06555 | | tetratricopeptide repeat protein | insig. | 36 | 65 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_24850 | | chemotaxis protein CheY | insig. | 29 | 77 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_659 | | Transcriptional regulatory protein ompR | insig. | 29 | 77 |
| | Caulobacter crescentus NA1000 | CCNA_02845 | | two-component response regulator | strong | 28 | 76 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02845 | | two-component response regulator | cofit | 28 | 76 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03050 | | Transcriptional regulatory protein OmpR | cofit | 30 | 77 |
| | Lysobacter sp. OAE881 | ABIE51_RS10330 | | winged helix-turn-helix domain-containing protein | insig. | 33 | 85 |
| | Variovorax sp. SCN45 | GFF526 | | Tricarboxylate transport transcriptional regulator TctD | insig. | 33 | 60 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03071 | | two-component system, OmpR family, response regulator | no data | 31 | 78 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS15245 | | response regulator | insig. | 40 | 54 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS15245 | | response regulator | insig. | 40 | 54 |
| | Alteromonas macleodii MIT1002 | MIT1002_00810 | | Transcriptional regulatory protein BasR | cofit | 35 | 60 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4300 | | Transcriptional regulatory protein ompR | no data | 30 | 74 |
| | Rhizobium sp. OAE497 | ABIE40_RS24305 | | response regulator | insig. | 30 | 73 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3511 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | insig. | 36 | 55 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3511 | | Response regulator receiver:Transcriptional regulatory protein, C-terminal | insig. | 36 | 55 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_58 | | Tricarboxylate transport transcriptional regulator TctD | strong | 36 | 60 |