Homologs of GFF3952 from Sphingobium sp. HT1-2

Efflux transport system, outer membrane factor (OMF) lipoprotein
SEED: RND efflux system, outer membrane lipoprotein CmeC

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF3952 Efflux transport system, outer membrane factor (OMF) lipoprotein cofit 100 100
o Ralstonia solanacearum PSI07 RPSI07_RS03385 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor insig. 49 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS19800 adeC/adeK/oprM family multidrug efflux complex outer membrane factor insig. 50 98
o Ralstonia solanacearum UW163 UW163_RS19375 adeC/adeK/oprM family multidrug efflux complex outer membrane factor insig. 50 98
o Pseudomonas aeruginosa MRSN321 DY961_RS22120 oprM;inference=COORDINATES multidrug efflux RND transporter outer membrane channel subunit OprM strong 48 100
o Pseudomonas aeruginosa PA14 IKLFDK_23285 multidrug efflux RND transporter outer membrane channel subunit OprM insig. 48 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS37185 oprM;inference=COORDINATES multidrug efflux RND transporter outer membrane channel subunit OprM no data 48 100
o Ralstonia solanacearum GMI1000 RS_RS21025 adeC/adeK/oprM family multidrug efflux complex outer membrane factor insig. 52 90
o Rhodospirillum rubrum S1H Rru_A2052 RND efflux system, outer membrane lipoprotein, NodT (NCBI) insig. 48 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1795.1 RND efflux system, outer membrane lipoprotein CmeC insig. 49 98
  Pseudomonas syringae pv. syringae B728a Psyr_4009 RND efflux system, outer membrane lipoprotein, NodT strong 46 98
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4009 RND efflux system, outer membrane lipoprotein, NodT insig. 46 98
  Pseudomonas fluorescens FW300-N2C3 AO356_30435 multidrug transporter insig. 45 100
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18290 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor insig. 49 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3245 RND efflux system, outer membrane lipoprotein, NodT family no data 47 98
o Caulobacter crescentus NA1000 CCNA_00849 outer membrane efflux protein strong 46 100
o Caulobacter crescentus NA1000 Δfur CCNA_00849 outer membrane efflux protein cofit 46 100
  Herbaspirillum seropedicae SmR1 HSERO_RS06820 multidrug transporter insig. 46 97
o Pseudomonas stutzeri RCH2 Psest_0311 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family strong 46 96
  Pseudomonas sp. DMC3 GFF2211 putative efflux pump outer membrane protein TtgC insig. 46 98
  Pseudomonas sp. RS175 PFR28_00630 putative efflux pump outer membrane protein TtgC strong 46 100
  Pseudomonas orientalis W4I3 QF045_RS09530 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor strong 47 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1948 RND efflux system, outer membrane lipoprotein CmeC insig. 45 100
  Sphingobium sp. HT1-2 GFF4624 Efflux transport system, outer membrane factor (OMF) lipoprotein cofit 49 96
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19195 efflux transporter outer membrane subunit strong 48 96
o Pseudomonas segetis P6 MPMX49_00684 Outer membrane protein OprM insig. 45 96
o Cupriavidus basilensis FW507-4G11 RR42_RS20655 multidrug transporter strong 47 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09440 multidrug transporter strong 47 97
  Ralstonia solanacearum UW163 UW163_RS04140 multidrug transporter insig. 47 97
  Pseudomonas fluorescens FW300-N2C3 AO356_00690 transporter insig. 46 96
o Variovorax sp. OAS795 ABID97_RS00330 efflux transporter outer membrane subunit cofit 48 96
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01514 putative efflux pump outer membrane protein TtgC cofit 47 98
  Herbaspirillum seropedicae SmR1 HSERO_RS23050 transporter insig. 45 96
  Variovorax sp. SCN45 GFF5991 Efflux transport system, outer membrane factor (OMF) lipoprotein insig. 48 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS02530 efflux transporter outer membrane subunit strong 46 98
  Pseudomonas fluorescens SBW25 PFLU_RS20130 efflux transporter outer membrane subunit insig. 46 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20130 efflux transporter outer membrane subunit insig. 46 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04169 outer membrane protein, multidrug efflux system strong 45 99
  Variovorax sp. SCN45 GFF3820 Efflux transport system, outer membrane factor (OMF) lipoprotein insig. 45 99
  Pseudomonas fluorescens FW300-N2C3 AO356_28295 multidrug transporter insig. 45 98
  Pseudomonas simiae WCS417 PS417_06765 multidrug transporter no data 46 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_223 RND efflux system, outer membrane lipoprotein CmeC insig. 46 98
  Pseudomonas fluorescens FW300-N2C3 AO356_04885 multidrug transporter strong 46 100
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2825 RND efflux system, outer membrane lipoprotein CmeC strong 46 100
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4582 RND efflux system, outer membrane lipoprotein CmeC strong 45 98
  Pseudomonas syringae pv. syringae B728a Psyr_2606 RND efflux system, outer membrane lipoprotein, NodT insig. 45 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2606 RND efflux system, outer membrane lipoprotein, NodT insig. 45 97
  Ralstonia solanacearum GMI1000 RS_RS00040 multidrug transporter strong 46 97
  Pseudomonas putida KT2440 PP_1384 Probable efflux pump outer membrane protein TtgC strong 45 98
  Pseudomonas fluorescens SBW25 PFLU_RS06800 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor insig. 46 98
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06800 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor strong 46 98
  Ralstonia solanacearum PSI07 RPSI07_RS23910 multidrug transporter strong 47 97
  Pseudomonas fluorescens FW300-N2E3 AO353_17290 multidrug transporter strong 45 98
  Pseudomonas sp. SVBP6 COO64_RS26280 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor insig. 45 98
  Pseudomonas sp. RS175 PFR28_02279 putative efflux pump outer membrane protein TtgC insig. 46 97
  Pseudomonas sp. BP01 JOY50_RS14440 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor cofit 44 98
o Rahnella sp. WP5 EX31_RS13330 efflux transporter outer membrane subunit insig. 44 98
  Dickeya dianthicola 67-19 HGI48_RS14115 efflux transporter outer membrane subunit cofit 47 99
o Pseudomonas sp. S08-1 OH686_16055 Multidrug efflux system, outer membrane factor lipoprotein strong 45 100
  Paraburkholderia sabiae LMG 24235 QEN71_RS29860 efflux transporter outer membrane subunit insig. 44 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS05320 efflux transporter outer membrane subunit strong 46 97
  Cupriavidus basilensis FW507-4G11 RR42_RS36970 RND transporter insig. 45 97
  Burkholderia phytofirmans PsJN BPHYT_RS16165 multidrug transporter no data 44 97
  Pseudomonas simiae WCS417 PS417_18280 transporter insig. 46 97
  Herbaspirillum seropedicae SmR1 HSERO_RS02405 multidrug transporter strong 45 97
  Pseudomonas fluorescens SBW25 PFLU_RS19585 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor insig. 46 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19585 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor sig. 46 99
  Pseudomonas orientalis W4I3 QF045_RS19325 efflux transporter outer membrane subunit cofit 45 98
  Serratia liquefaciens MT49 IAI46_12705 efflux transporter outer membrane subunit cofit 44 97
  Pseudomonas syringae pv. syringae B728a Psyr_2864 RND efflux system, outer membrane lipoprotein, NodT insig. 46 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2864 RND efflux system, outer membrane lipoprotein, NodT insig. 46 97
  Dickeya dadantii 3937 DDA3937_RS14115 efflux transporter outer membrane subunit insig. 46 99
  Serratia liquefaciens MT49 IAI46_16730 efflux transporter outer membrane subunit insig. 47 99
  Variovorax sp. SCN45 GFF3724 Efflux transport system, outer membrane factor (OMF) lipoprotein insig. 46 96
  Acidovorax sp. GW101-3H11 Ac3H11_4447 RND efflux system, outer membrane lipoprotein CmeC strong 48 96
  Methylophilus sp. DMC18 GFF2592 Outer membrane protein OprM insig. 42 97
  Burkholderia phytofirmans PsJN BPHYT_RS34590 multidrug transporter insig. 43 96
  Pseudomonas sp. BP01 JOY50_RS12335 efflux transporter outer membrane subunit insig. 45 97
  Cupriavidus basilensis FW507-4G11 RR42_RS32425 multidrug transporter insig. 44 98
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0558 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family insig. 46 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21910 RND transporter insig. 43 98
  Ralstonia solanacearum UW163 UW163_RS17275 RND transporter insig. 43 98
o Acinetobacter baumannii LAC-4 RR41_RS03860 multidrug efflux RND transporter outer membrane channel subunit AdeK no data 44 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00998 outer membrane protein, multidrug efflux system insig. 41 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3841 RND efflux system, outer membrane lipoprotein CmeC cofit 48 96
  Escherichia fergusonii Becca EFB2_02632 putative efflux pump outer membrane protein TtgC insig. 41 100
  Castellaniella sp019104865 MT123 ABCV34_RS04220 efflux transporter outer membrane subunit no data 42 99
  Escherichia coli Nissle 1917 ECOLIN_RS07795 TolC family protein no data 41 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4245 RND efflux system, outer membrane lipoprotein CmeC insig. 42 100
  Rahnella sp. WP5 EX31_RS00455 efflux transporter outer membrane subunit insig. 41 99
  Escherichia coli ECOR38 HEPCGN_25710 tolC multidrug transporter insig. 41 100
o Acinetobacter radioresistens SK82 MPMX26_00688 Outer membrane protein OprM strong 41 99
  Escherichia coli ECRC101 MCAODC_15780 tolC multidrug transporter insig. 41 100
  Escherichia coli ECRC102 NIAGMN_26660 tolC multidrug transporter cofit 41 100
  Escherichia coli ECRC98 JDDGAC_05035 tolC multidrug transporter insig. 41 100
  Escherichia coli ECRC99 KEDOAH_26285 tolC multidrug transporter no data 41 100
  Klebsiella michiganensis M5al BWI76_RS27700 multidrug transporter insig. 41 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU2815 outer membrane efflux protein (TIGR) insig. 38 97
  Enterobacter asburiae PDN3 EX28DRAFT_3935 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family insig. 42 99
  Klebsiella pneumoniae MKP103 KDGMDA_08340 multidrug efflux RND transporter outer membrane subunit EefC insig. 41 98