Homologs of PS417_19145 from Pseudomonas simiae WCS417

membrane protein
SEED: Sensory box/GGDEF family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_19145 membrane protein strong 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS21140 EAL domain-containing protein cofit 97 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS21140 EAL domain-containing protein strong 97 100
o Pseudomonas orientalis W4I3 QF045_RS21100 EAL domain-containing protein cofit 92 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04056 hypothetical protein cofit 92 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2530 Sensory box/GGDEF family protein strong 85 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_361 Sensory box/GGDEF family protein insig. 85 100
o Pseudomonas fluorescens FW300-N2C3 AO356_03515 hypothetical protein cofit 85 100
o Pseudomonas sp. RS175 PFR28_00896 hypothetical protein insig. 84 100
o Pseudomonas sp. DMC3 GFF4687 hypothetical protein cofit 84 100
o Pseudomonas fluorescens FW300-N2E3 AO353_02120 hypothetical protein strong 86 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2166 Sensory box/GGDEF family protein insig. 85 100
o Pseudomonas sp. SVBP6 COO64_RS06790 EAL domain-containing protein cofit 79 100
o Pseudomonas sp. BP01 JOY50_RS16180 EAL domain-containing protein insig. 75 100
o Pseudomonas putida KT2440 PP_1761 diguanylate cyclase with phosphodiesterase domain strong 75 100
o Pseudomonas syringae pv. syringae B728a Psyr_3655 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) cofit 72 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3655 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 72 100
o Pseudomonas aeruginosa MRSN321 DY961_RS08185 EAL domain-containing protein sig. 68 97
o Pseudomonas aeruginosa PUPa3 DQ20_RS44635 EAL domain-containing protein insig. 68 97
o Pseudomonas aeruginosa PA14 IKLFDK_03805 PAS domain S-box protein insig. 68 86
o Pseudomonas sp. S08-1 OH686_21075 Sensory box/GGDEF family protein insig. 60 97
o Acidovorax sp. GW101-3H11 Ac3H11_4120 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 53 98
  Cupriavidus basilensis FW507-4G11 RR42_RS03995 diguanylate cyclase insig. 42 71
  Pseudomonas aeruginosa MRSN321 DY961_RS06515 diguanylate cyclase sig. 43 69
  Pseudomonas aeruginosa PA14 IKLFDK_05475 diguanylate cyclase insig. 43 69
  Pseudomonas aeruginosa PUPa3 DQ20_RS46285 diguanylate cyclase cofit 43 69
  Acidovorax sp. GW101-3H11 Ac3H11_2446 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 43 71
  Bosea sp. OAE506 ABIE41_RS19250 EAL domain-containing protein insig. 41 69
  Methylophilus sp. DMC18 GFF887 hypothetical protein cofit 47 52
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS02790 EAL domain-containing protein insig. 40 72
  Rhodanobacter denitrificans MT42 LRK55_RS09660 EAL domain-containing protein insig. 42 65
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10020 EAL domain-containing protein insig. 42 65
  Rhodanobacter sp. FW510-T8 OKGIIK_16275 Diguanylate cyclase insig. 46 54
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1842.1 Mlr3171 protein insig. 32 95
  Vibrio cholerae E7946 ATCC 55056 CSW01_00390 GGDEF domain-containing protein insig. 43 58
  Dechlorosoma suillum PS Dsui_2894 diguanylate cyclase (GGDEF) domain-containing protein cofit 43 59
  Alteromonas macleodii MIT1002 MIT1002_00145 Cyclic di-GMP phosphodiesterase Gmr cofit 38 66
  Shewanella sp. ANA-3 Shewana3_0436 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) strong 38 67
  Shewanella oneidensis MR-1 SO0437 sensory box protein (NCBI ptt file) strong 38 67
  Pseudomonas sp. S08-1 OH686_11905 hypothetical protein insig. 38 68
  Shewanella loihica PV-4 Shew_3416 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 37 67
  Shewanella sp. ANA-3 Shewana3_0620 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 38 56
  Shewanella oneidensis MR-1 SO0628 GGDEF domain protein (NCBI ptt file) insig. 39 54
  Shewanella amazonensis SB2B Sama_0388 putative diguanylate phosphodiesterase (RefSeq) strong 36 67
  Shewanella amazonensis SB2B Sama_2973 GGDEF domain-containing protein (RefSeq) insig. 36 63
  Rhodospirillum rubrum S1H Rru_A2763 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 38 67
  Acidovorax sp. GW101-3H11 Ac3H11_903 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 32 75
  Shewanella loihica PV-4 Shew_3125 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 38 57
  Dechlorosoma suillum PS Dsui_0760 diguanylate cyclase (GGDEF) domain-containing protein cofit 33 69
  Methylophilus sp. DMC18 GFF623 hypothetical protein insig. 33 69
  Pseudomonas segetis P6 ACVTMO_RS12875 DUF1631 family protein insig. 38 52
  Kangiella aquimarina DSM 16071 B158DRAFT_2394 diguanylate cyclase (GGDEF) domain strong 37 52
  Serratia liquefaciens MT49 IAI46_18940 diguanylate cyclase insig. 30 70
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3859 FIG00509877: hypothetical protein insig. 33 68
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21640 GGDEF domain-containing protein insig. 36 66
  Ralstonia solanacearum UW163 UW163_RS17545 GGDEF domain-containing protein insig. 36 66
  Ralstonia solanacearum GMI1000 RS_RS18985 GGDEF domain-containing protein insig. 35 66
  Synechococcus elongatus PCC 7942 Synpcc7942_1158 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 33 69
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 33 67
  Ralstonia sp. UNC404CL21Col ABZR87_RS22185 EAL domain-containing protein insig. 35 66
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 34 70
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 34 70
  Ralstonia solanacearum PSI07 RPSI07_RS01485 GGDEF domain-containing protein insig. 35 66
  Acidovorax sp. GW101-3H11 Ac3H11_2498 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 33 69
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 34 70
  Escherichia coli ECOR27 NOLOHH_15605 dgcE diguanylate cyclase insig. 32 69
  Escherichia coli ECRC62 BNILDI_14510 dgcE diguanylate cyclase cofit 32 69
  Escherichia coli BL21 ECD_01973 putative diguanylate cyclase insig. 32 69
  Pseudomonas orientalis W4I3 QF045_RS00285 EAL domain-containing protein cofit 34 70
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 34 70
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 34 70
  Shewanella loihica PV-4 Shew_0979 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 32 69
  Escherichia coli BW25113 b2067 yegE predicted diguanylate cyclase, GGDEF domain signalling protein (NCBI) sig. 32 69
  Enterobacter sp. TBS_079 MPMX20_03049 putative diguanylate cyclase DgcE sig. 31 69
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 34 70
  Herbaspirillum seropedicae SmR1 HSERO_RS18020 diguanylate cyclase insig. 33 69
  Dechlorosoma suillum PS Dsui_1531 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 66
  Pseudomonas sp. DMC3 GFF52 hypothetical protein insig. 34 70
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1185 sensory box/GGDEF domain/EAL domain protein insig. 34 70
  Marinobacter adhaerens HP15 HP15_862 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain insig. 38 54
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 34 70
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 34 70
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05297 Membrane-bound lytic murein transglycosylase F cofit 34 70
  Enterobacter asburiae PDN3 EX28DRAFT_0487 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 30 69
  Escherichia coli ECRC100 OKFHMN_24260 mASE1 diguanylate cyclase cofit 31 69
  Escherichia coli ECRC101 MCAODC_20680 mASE1 diguanylate cyclase insig. 31 69
  Escherichia coli ECRC102 NIAGMN_22205 mASE1 diguanylate cyclase insig. 31 69
  Escherichia coli ECRC98 JDDGAC_28370 mASE1 diguanylate cyclase insig. 31 69
  Escherichia coli ECRC99 KEDOAH_03890 mASE1 diguanylate cyclase no data 31 69
  Escherichia coli ECOR38 HEPCGN_02965 mASE1 diguanylate cyclase insig. 31 69
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 34 68
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15525 GGDEF and EAL domain-containing protein insig. 33 69
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01638 putative diguanylate cyclase DgcE insig. 31 69
  Pseudomonas sp. S08-1 OH686_00995 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 34 66
  Methylophilus sp. DMC18 GFF1755 hypothetical protein insig. 33 69
  Escherichia fergusonii Becca EFB2_01787 putative diguanylate cyclase DgcE insig. 31 69
  Escherichia coli Nissle 1917 ECOLIN_RS12165 diguanylate cyclase sig. 31 69
  Marinobacter adhaerens HP15 HP15_3312 diguanylate cyclase/phosphodiesterase cofit 37 53
  Shewanella loihica PV-4 Shew_0041 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) strong 30 70
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 33 66