Homologs of HP15_3552 from Marinobacter adhaerens HP15

exoribonuclease R
SEED: 3'-to-5' exoribonuclease RNase R
KEGG: ribonuclease R

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Marinobacter adhaerens HP15 HP15_3552 exoribonuclease R strong 100 100
  Marinobacter adhaerens HP15 HP15_622 exoribonuclease R strong 33 94
  Dechlorosoma suillum PS Dsui_3128 ribonuclease R cofit 31 95
  Erwinia amylovora T8 OLJFJH_02470 ribonuclease R strong 31 95
  Pseudomonas sp. DMC3 GFF3229 Ribonuclease R sig. 31 94
  Pseudomonas fluorescens GW456-L13 PfGW456L13_144 3'-to-5' exoribonuclease RNase R strong 31 94
  Pseudomonas sp. SVBP6 COO64_RS17955 rnr ribonuclease R insig. 31 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1403 3'-to-5' exoribonuclease RNase R strong 31 94
  Pseudomonas simiae WCS417 PS417_02555 exoribonuclease R strong 31 94
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00747 Ribonuclease R cofit 31 94
  Pseudomonas fluorescens FW300-N2C3 AO356_08610 exoribonuclease R strong 31 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3607 3'-to-5' exoribonuclease RNase R strong 31 94
  Pseudomonas fluorescens SBW25 PFLU_RS02625 ribonuclease R cofit 31 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS02625 ribonuclease R strong 31 94
  Variovorax sp. OAS795 ABID97_RS17200 ribonuclease R strong 32 97
  Variovorax sp. SCN45 GFF399 3'-to-5' exoribonuclease RNase R cofit 32 97
  Pectobacterium carotovorum WPP14 HER17_RS03835 ribonuclease R cofit 31 98
  Pseudomonas fluorescens FW300-N2E3 AO353_13200 exoribonuclease R strong 31 94
  Pseudomonas putida KT2440 PP_4880 exoribonuclease R strong 31 94
  Pseudomonas stutzeri RCH2 Psest_0691 ribonuclease R strong 30 96
  Escherichia coli BL21 ECD_04046 exoribonuclease R, RNase R insig. 31 97
  Escherichia fergusonii Becca EFB2_04356 Ribonuclease R insig. 31 97
  Escherichia coli ECRC100 OKFHMN_12220 rnr ribonuclease R cofit 31 97
  Escherichia coli ECRC101 MCAODC_02735 rnr ribonuclease R sig. 31 97
  Escherichia coli ECRC102 NIAGMN_10070 rnr ribonuclease R cofit 31 97
  Escherichia coli ECRC98 JDDGAC_15860 rnr ribonuclease R cofit 31 97
  Escherichia coli ECRC99 KEDOAH_15935 rnr ribonuclease R no data 31 97
  Escherichia coli BW25113 b4179 vacB putative enzyme (VIMSS) strong 31 97
  Escherichia coli ECOR27 NOLOHH_04485 rnr ribonuclease R insig. 31 97
  Escherichia coli ECRC62 BNILDI_07005 rnr ribonuclease R cofit 31 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03863 Ribonuclease R cofit 31 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 strong 31 98
  Pseudomonas sp. BP01 JOY50_RS17320 rnr ribonuclease R insig. 31 94
  Escherichia coli ECOR38 HEPCGN_10450 rnr ribonuclease R cofit 31 97
  Escherichia coli Nissle 1917 ECOLIN_RS24265 ribonuclease R sig. 31 97
  Pseudomonas sp. RS175 PFR28_05130 Ribonuclease R strong 30 94
  Pseudomonas aeruginosa PA14 IKLFDK_28865 ribonuclease R strong 31 94
  Vibrio cholerae E7946 ATCC 55056 CSW01_13155 ribonuclease R cofit 30 94
  Enterobacter sp. TBS_079 MPMX20_00460 Ribonuclease R sig. 30 98
  Pseudomonas syringae pv. syringae B728a Psyr_0579 RNAse R strong 30 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0579 RNAse R strong 30 94
  Pseudomonas sp. S08-1 OH686_15910 ribonuclease R cofit 30 95
  Enterobacter asburiae PDN3 EX28DRAFT_3376 ribonuclease R strong 30 98
  Pantoea sp. MT58 IAI47_02625 ribonuclease R sig. 30 97
  Klebsiella pneumoniae MKP103 KDGMDA_11075 ribonuclease R cofit 30 97
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_13230 rnr ribonuclease R strong 30 97
  Erwinia tracheiphila SCR3 LU632_RS21750 rnr ribonuclease R strong 30 97
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS11220 ribonuclease R cofit 30 97
  Acidovorax sp. GW101-3H11 Ac3H11_412 3'-to-5' exoribonuclease RNase R strong 31 96
  Kangiella aquimarina DSM 16071 B158DRAFT_1989 ribonuclease R cofit 30 95
  Shewanella loihica PV-4 Shew_3289 ribonuclease R (RefSeq) strong 30 95
  Serratia liquefaciens MT49 IAI46_01660 ribonuclease R insig. 30 94
  Rahnella sp. WP5 EX31_RS08785 ribonuclease R insig. 29 98
  Cupriavidus basilensis FW507-4G11 RR42_RS13065 ribonuclease R strong 31 94
  Methylophilus sp. DMC18 GFF635 Ribonuclease R insig. 30 96
  Shewanella oneidensis MR-1 SO3935 vacB ribonuclease R (NCBI ptt file) strong 30 95
  Klebsiella michiganensis M5al BWI76_RS02575 exoribonuclease R sig. 30 97
  Ralstonia sp. UNC404CL21Col ABZR87_RS10985 ribonuclease R sig. 30 94
  Dickeya dianthicola ME23 DZA65_RS18405 ribonuclease R insig. 30 97
  Shewanella sp. ANA-3 Shewana3_0697 RNAse R (RefSeq) strong 30 95
  Dickeya dianthicola 67-19 HGI48_RS17315 ribonuclease R cofit 30 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3370.1 3'-to-5' exoribonuclease RNase R strong 31 94
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15345 ribonuclease R strong 30 94
  Ralstonia solanacearum UW163 UW163_RS12810 ribonuclease R insig. 30 94
  Ralstonia solanacearum PSI07 RPSI07_RS18030 ribonuclease R strong 30 94
  Ralstonia solanacearum GMI1000 RS_RS06155 ribonuclease R strong 30 94
  Castellaniella sp019104865 MT123 ABCV34_RS06625 ribonuclease R cofit 31 98
  Dickeya dadantii 3937 DDA3937_RS17260 ribonuclease R sig. 30 98
  Lysobacter sp. OAE881 ABIE51_RS07475 ribonuclease R cofit 31 95
  Shewanella amazonensis SB2B Sama_3067 exoribonuclease II (RefSeq) strong 29 94
  Dickeya dianthicola ME23 DZA65_RS12995 exoribonuclease II sig. 34 89
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4921 3'-to-5' exoribonuclease RNase R cofit 31 90
  Alteromonas macleodii MIT1002 MIT1002_03606 Ribonuclease R cofit 30 96
  Dickeya dianthicola 67-19 HGI48_RS12545 exoribonuclease II cofit 34 89
  Klebsiella michiganensis M5al BWI76_RS11990 exoribonuclease II sig. 34 89
  Acinetobacter baumannii LAC-4 RR41_RS02345 ribonuclease R strong 31 95
  Dickeya dadantii 3937 DDA3937_RS12490 exoribonuclease II strong 33 89
  Herbaspirillum seropedicae SmR1 HSERO_RS09290 ribonuclease R strong 30 94
  Acinetobacter radioresistens SK82 MPMX26_02684 Ribonuclease R cofit 31 94
  Rhodanobacter denitrificans MT42 LRK55_RS00235 ribonuclease R strong 29 97
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00495 ribonuclease R strong 29 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS22925 ribonuclease R strong 30 95
  Erwinia amylovora T8 OLJFJH_13600 exoribonuclease II cofit 33 89
  Pantoea sp. MT58 IAI47_09320 exoribonuclease II sig. 35 78
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS06855 exoribonuclease II cofit 34 89
  Rahnella sp. WP5 EX31_RS07155 exoribonuclease II insig. 33 89
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09655 ribonuclease R cofit 29 96
  Klebsiella pneumoniae MKP103 KDGMDA_19680 exoribonuclease II strong 34 89
  Enterobacter asburiae PDN3 EX28DRAFT_0961 exoribonuclease II cofit 34 89
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2698 Exoribonuclease II (EC 3.1.13.1) strong 34 89
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_23355 exoribonuclease II no data 33 89
  Erwinia tracheiphila SCR3 LU632_RS12255 exoribonuclease II no data 33 89
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08270 ribonuclease R strong 29 96
  Enterobacter sp. TBS_079 MPMX20_02487 Exoribonuclease 2 strong 33 89
  Paraburkholderia graminis OAS925 ABIE53_001940 ribonuclease R strong 30 96
  Serratia liquefaciens MT49 IAI46_13870 exoribonuclease II cofit 33 89
  Pectobacterium carotovorum WPP14 HER17_RS09430 exoribonuclease II strong 33 89
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00712 RNAse R strong 30 94
  Burkholderia phytofirmans PsJN BPHYT_RS08455 ribonuclease R sig. 29 94
  Rhodanobacter sp. FW510-T8 OKGIIK_06755 rnr ribonuclease R strong 29 94