Homologs of GFF3330 from Hydrogenophaga sp. GW460-11-11-14-LB1

COG1399 protein, clustered with ribosomal protein L32p
SEED: COG1399 protein, clustered with ribosomal protein L32p
KEGG: uncharacterized protein

82 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3330 COG1399 protein, clustered with ribosomal protein L32p no data 100 100
o Variovorax sp. OAS795 ABID97_RS08285 DUF177 domain-containing protein no data 51 95
o Acidovorax sp. GW101-3H11 Ac3H11_1583 COG1399 protein, clustered with ribosomal protein L32p cofit 52 94
o Variovorax sp. SCN45 GFF3854 FIG01269488: protein, clustered with ribosomal protein L32p insig. 53 95
o Ralstonia solanacearum GMI1000 RS_RS05185 metal-binding protein insig. 36 93
o Dechlorosoma suillum PS Dsui_2443 putative metal-binding protein, possibly nucleic-acid binding protein insig. 35 91
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14405 metal-binding protein no data 36 92
o Ralstonia solanacearum UW163 UW163_RS11870 metal-binding protein no data 36 92
o Herbaspirillum seropedicae SmR1 HSERO_RS09580 DNA-binding protein no data 30 94
o Pseudomonas stutzeri RCH2 Psest_1684 Predicted metal-binding, possibly nucleic acid-binding protein no data 34 93
o Ralstonia sp. UNC404CL21Col ABZR87_RS10120 YceD family protein insig. 35 92
o Ralstonia solanacearum PSI07 RPSI07_RS19055 metal-binding protein no data 35 92
o Castellaniella sp019104865 MT123 ABCV34_RS08395 YceD family protein insig. 30 91
o Cupriavidus basilensis FW507-4G11 RR42_RS14125 metal-binding protein strong 35 92
  Paraburkholderia graminis OAS925 ABIE53_003052 uncharacterized protein sig. 37 93
o Pseudomonas sp. RS175 PFR28_03014 Large ribosomal RNA subunit accumulation protein YceD no data 32 93
o Pseudomonas aeruginosa PA14 IKLFDK_15115 metal-binding protein cofit 28 93
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04346 uncharacterized protein insig. 34 96
o Burkholderia phytofirmans PsJN BPHYT_RS14450 hypothetical protein sig. 34 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS04530 DUF177 domain-containing protein insig. 38 77
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4000.1 COG1399 protein, clustered with ribosomal protein L32p insig. 28 95
  Shewanella loihica PV-4 Shew_1598 hypothetical protein (RefSeq) no data 35 60
  Alteromonas macleodii MIT1002 MIT1002_01728 hypothetical protein no data 34 59
  Shewanella amazonensis SB2B Sama_1985 hypothetical protein (RefSeq) no data 35 60
  Shewanella sp. ANA-3 Shewana3_2563 hypothetical protein (RefSeq) no data 33 60
  Pseudomonas sp. S08-1 OH686_22120 protein, clustered with ribosomal protein L32p no data 37 54
  Shewanella oneidensis MR-1 SO2781 conserved hypothetical protein (NCBI ptt file) no data 33 60
o Acinetobacter baumannii LAC-4 RR41_RS15190 DUF177 domain-containing protein strong 28 61
  Methylophilus sp. DMC18 GFF1262 hypothetical protein cofit 28 89
  Serratia liquefaciens MT49 IAI46_09765 23S rRNA accumulation protein YceD no data 32 58
  Rahnella sp. WP5 EX31_RS24410 23S rRNA accumulation protein YceD cofit 28 93
  Acinetobacter radioresistens SK82 MPMX26_02444 Large ribosomal RNA subunit accumulation protein YceD no data 28 61
  Lysobacter sp. OAE881 ABIE51_RS13965 YceD family protein no data 27 93
  Pantoea sp. MT58 IAI47_12095 23S rRNA accumulation protein YceD no data 33 68
  Rhodanobacter sp. FW510-T8 OKGIIK_05695 Large ribosomal RNA subunit accumulation protein YceD insig. 31 88
  Dickeya dianthicola 67-19 HGI48_RS13210 23S rRNA accumulation protein YceD insig. 28 93
  Dickeya dianthicola ME23 DZA65_RS13680 23S rRNA accumulation protein YceD no data 27 93
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05240 23S rRNA accumulation protein YceD cofit 34 68
  Pseudomonas sp. BP01 JOY50_RS16810 YceD family protein no data 30 93
  Klebsiella pneumoniae MKP103 KDGMDA_18670 23S rRNA accumulation protein YceD sig. 33 57
  Erwinia amylovora T8 OLJFJH_15555 23S rRNA accumulation protein YceD sig. 29 93
  Pseudomonas putida KT2440 PP_1910 conserved protein of unknown function no data 30 93
  Pectobacterium carotovorum WPP14 HER17_RS08625 23S rRNA accumulation protein YceD insig. 28 93
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2101 COG1399 protein, clustered with ribosomal protein L32p no data 31 93
  Dickeya dadantii 3937 DDA3937_RS13145 23S rRNA accumulation protein YceD strong 32 58
  Escherichia coli BL21 ECD_01084 DUF177 family protein strong 33 59
  Escherichia fergusonii Becca EFB2_02887 Large ribosomal RNA subunit accumulation protein YceD strong 33 59
  Escherichia coli ECOR27 NOLOHH_21130 yceD 23S rRNA accumulation protein YceD insig. 33 59
  Escherichia coli ECOR38 HEPCGN_23880 yceD 23S rRNA accumulation protein YceD strong 33 59
  Escherichia coli ECRC100 OKFHMN_03600 yceD 23S rRNA accumulation protein YceD cofit 33 59
  Escherichia coli ECRC101 MCAODC_22960 yceD 23S rRNA accumulation protein YceD strong 33 59
  Escherichia coli ECRC102 NIAGMN_24230 yceD 23S rRNA accumulation protein YceD strong 33 59
  Escherichia coli ECRC62 BNILDI_19290 yceD 23S rRNA accumulation protein YceD strong 33 59
  Escherichia coli ECRC98 JDDGAC_07260 yceD 23S rRNA accumulation protein YceD strong 33 59
  Escherichia coli ECRC99 KEDOAH_24155 yceD 23S rRNA accumulation protein YceD no data 33 59
  Escherichia coli Nissle 1917 ECOLIN_RS06290 23S rRNA accumulation protein YceD cofit 33 59
  Escherichia coli BW25113 b1088 yceD hypothetical protein (NCBI) strong 33 59
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_00705 yceD 23S rRNA accumulation protein YceD no data 32 68
  Erwinia tracheiphila SCR3 LU632_RS14845 yceD 23S rRNA accumulation protein YceD insig. 32 68
  Pseudomonas sp. DMC3 GFF4761 Large ribosomal RNA subunit accumulation protein YceD no data 31 93
  Pseudomonas fluorescens FW300-N2C3 AO356_20145 metal-binding protein no data 31 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5948 COG1399 protein, clustered with ribosomal protein L32p no data 31 93
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS08865 YceD family protein no data 30 88
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS06190 YceD family protein cofit 32 93
  Rhodanobacter denitrificans MT42 LRK55_RS00980 YceD family protein no data 27 88
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02578 Large ribosomal RNA subunit accumulation protein YceD insig. 32 59
  Klebsiella michiganensis M5al BWI76_RS11065 hypothetical protein no data 34 57
  Enterobacter asburiae PDN3 EX28DRAFT_1841 Predicted metal-binding, possibly nucleic acid-binding protein insig. 33 57
  Pseudomonas sp. SVBP6 COO64_RS05825 YceD family protein no data 31 93
  Pseudomonas fluorescens FW300-N2E3 AO353_01385 metal-binding protein no data 30 93
  Marinobacter adhaerens HP15 HP15_2217 protein containing DUF177 no data 29 93
  Pseudomonas syringae pv. syringae B728a Psyr_1643 Protein of unknown function DUF177 no data 28 93
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1643 Protein of unknown function DUF177 no data 28 93
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_455 COG1399 protein, clustered with ribosomal protein L32p no data 30 93
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS01205 YceD family protein no data 30 88
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04436 Large ribosomal RNA subunit accumulation protein YceD no data 30 93
  Pseudomonas simiae WCS417 PS417_21460 metal-binding protein no data 31 93
  Pseudomonas fluorescens SBW25 PFLU_RS23075 hypothetical protein insig. 30 93
  Pseudomonas fluorescens SBW25-INTG PFLU_RS23075 hypothetical protein no data 30 93
  Enterobacter sp. TBS_079 MPMX20_01768 Large ribosomal RNA subunit accumulation protein YceD sig. 32 57
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3370 COG1399 protein, clustered with ribosomal protein L32p cofit 27 93
  Vibrio cholerae E7946 ATCC 55056 CSW01_10120 23S rRNA accumulation protein YceD no data 26 93