Homologs of GFF2578 from Xanthobacter sp. DMC5

Solute-binding protein
SEED: TRAP transporter solute receptor, unknown substrate 4

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF2578 Solute-binding protein insig. 100 100
o Rhodopseudomonas palustris CGA009 TX73_013140 TRAP transporter substrate-binding protein DctP insig. 71 96
o Herbaspirillum seropedicae SmR1 HSERO_RS13480 C4-dicarboxylate ABC transporter sig. 64 96
o Magnetospirillum magneticum AMB-1 AMB_RS02185 C4-dicarboxylate ABC transporter insig. 64 91
o Castellaniella sp019104865 MT123 ABCV34_RS01190 TRAP transporter substrate-binding protein DctP insig. 37 89
o Sinorhizobium meliloti 1021 SMa0157 ABC transporter substrate-binding protein insig. 36 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS36150 TRAP transporter substrate-binding protein DctP insig. 35 87
  Castellaniella sp019104865 MT123 ABCV34_RS15060 TRAP transporter substrate-binding protein DctP insig. 36 88
o Dinoroseobacter shibae DFL-12 Dshi_3003 TRAP dicarboxylate transporter- DctP subunit (RefSeq) insig. 35 89
  Magnetospirillum magneticum AMB-1 AMB_RS06725 TRAP-type C4-dicarboxylate transport system insig. 28 90
  Bosea sp. OAE506 ABIE41_RS24145 TRAP transporter substrate-binding protein insig. 26 86
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF430 2,3-diketo-L-gulonate-binding periplasmic protein yiaO precursor insig. 27 96
  Variovorax sp. OAS795 ABID97_RS10340 TRAP transporter substrate-binding protein insig. 29 74
  Castellaniella sp019104865 MT123 ABCV34_RS13980 TRAP transporter substrate-binding protein insig. 29 83
  Escherichia coli ECOR38 HEPCGN_14765 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO insig. 28 87
  Magnetospirillum magneticum AMB-1 AMB_RS04560 C4-dicarboxylate ABC transporter cofit 28 87
  Escherichia coli ECOR27 NOLOHH_07820 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO insig. 28 97
  Escherichia fergusonii Becca EFB2_00227 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 27 97
  Escherichia coli Nissle 1917 ECOLIN_RS20470 2,3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO insig. 27 97
  Herbaspirillum seropedicae SmR1 HSERO_RS04240 C4-dicarboxylate ABC transporter sig. 27 85
  Escherichia coli BL21 ECD_03431 2,3-diketo-L-gulonate-binding periplasmic protein insig. 27 87
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00125 2,3-diketo-L-gulonate-binding periplasmic protein YiaO insig. 27 87
  Escherichia coli BW25113 b3579 yiaO predicted transporter (NCBI) insig. 27 87
  Sinorhizobium meliloti 1021 SMc00271 periplasmic binding protein insig. 26 85
  Pseudomonas sp. DMC3 GFF1616 Solute-binding protein cofit 27 75
  Acidovorax sp. GW101-3H11 Ac3H11_1227 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 25 77
  Escherichia coli ECRC62 BNILDI_03725 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO insig. 27 97
  Rhodopseudomonas palustris CGA009 TX73_010550 TRAP transporter substrate-binding protein strong 27 83
  Rahnella sp. WP5 EX31_RS08010 TRAP transporter substrate-binding protein insig. 25 78
  Sinorhizobium meliloti 1021 SM_b20036 ABC transporter substrate-binding protein insig. 25 74
  Azospirillum brasilense Sp245 AZOBR_RS09605 C4-dicarboxylate ABC transporter sig. 26 87
  Acidovorax sp. GW101-3H11 Ac3H11_2073 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 26 74
  Pseudomonas fluorescens FW300-N2C3 AO356_23055 C4-dicarboxylate ABC transporter insig. 27 75
  Castellaniella sp019104865 MT123 ABCV34_RS11540 TRAP transporter substrate-binding protein insig. 25 91
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3791 TRAP transporter solute receptor, unknown substrate 3 insig. 27 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2987 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 27 83
  Pseudomonas sp. RS175 PFR28_02438 Solute-binding protein strong 26 75
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_487 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 26 75
o Phaeobacter inhibens DSM 17395 PGA1_c33920 TRAP transporter, subunit DctP sig. 26 88
  Variovorax sp. SCN45 GFF1519 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 26 80
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03768 Solute-binding protein cofit 27 75
  Xanthobacter sp. DMC5 GFF2557 Solute-binding protein insig. 28 72
  Pseudomonas segetis P6 MPMX49_02372 2,3-diketo-L-gulonate-binding periplasmic protein YiaO cofit 26 89
  Acidovorax sp. GW101-3H11 Ac3H11_157 TRAP transporter solute receptor, unknown substrate 5 sig. 28 77
  Pectobacterium carotovorum WPP14 HER17_RS19675 TRAP transporter substrate-binding protein insig. 25 76
  Azospirillum sp. SherDot2 MPMX19_00659 C4-dicarboxylate-binding periplasmic protein DctP insig. 29 70
  Variovorax sp. SCN45 GFF1521 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 25 82
  Castellaniella sp019104865 MT123 ABCV34_RS01500 TRAP transporter substrate-binding protein cofit 27 79
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF797 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 26 71
  Pseudomonas putida KT2440 PP_1169 D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) strong 27 60
  Dinoroseobacter shibae DFL-12 Dshi_1480 TRAP dicarboxylate transporter- DctP subunit (RefSeq) insig. 26 83
  Castellaniella sp019104865 MT123 ABCV34_RS09330 TRAP transporter substrate-binding protein insig. 28 90
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03838 Solute-binding protein insig. 27 90
  Escherichia coli ECRC62 BNILDI_07130 Bacterial extracellular solute-binding protein, family 7 insig. 27 83
  Variovorax sp. SCN45 GFF6468 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 27 93
  Escherichia coli Nissle 1917 ECOLIN_RS17380 TRAP transporter substrate-binding protein insig. 27 74
  Rhodospirillum rubrum S1H Rru_A3678 TRAP dicarboxylate transporter- DctP subunit (NCBI) strong 27 70
  Pseudomonas sp. BP01 JOY50_RS02035 TRAP transporter substrate-binding protein insig. 25 63
  Pseudomonas stutzeri RCH2 Psest_0363 tripartite ATP-independent periplasmic transporter solute receptor, DctP family insig. 26 85
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5231 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 24 88
  Pseudomonas fluorescens SBW25 PFLU_RS19295 TRAP transporter substrate-binding protein insig. 27 59
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19295 TRAP transporter substrate-binding protein insig. 27 59
  Escherichia coli ECOR38 HEPCGN_01260 C4-dicarboxylate ABC transporter insig. 26 85
  Azospirillum sp. SherDot2 MPMX19_05866 hypothetical protein insig. 26 82
  Bosea sp. OAE506 ABIE41_RS23675 sialic acid TRAP transporter substrate-binding protein SiaP insig. 26 80
  Azospirillum brasilense Sp245 AZOBR_RS30130 C4-dicarboxylate ABC transporter insig. 24 87
  Dinoroseobacter shibae DFL-12 Dshi_1089 TRAP dicarboxylate transporter- DctP subunit (RefSeq) insig. 27 63
  Sinorhizobium meliloti 1021 SM_b21353 periplasmic C4-dicarboxylate transport protein insig. 26 73
  Variovorax sp. OAS795 ABID97_RS19600 TRAP transporter substrate-binding protein insig. 29 78
  Variovorax sp. OAS795 ABID97_RS19625 TRAP transporter substrate-binding protein insig. 26 89
  Acidovorax sp. GW101-3H11 Ac3H11_1176 TRAP transporter solute receptor, unknown substrate 3 insig. 26 76
  Azospirillum brasilense Sp245 AZOBR_RS31400 C4-dicarboxylate ABC transporter insig. 26 76
  Pseudomonas segetis P6 MPMX49_04070 Solute-binding protein insig. 25 62
  Acidovorax sp. GW101-3H11 Ac3H11_161 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein insig. 26 85
  Pseudomonas segetis P6 MPMX49_03606 Solute-binding protein insig. 24 81
  Pseudomonas orientalis W4I3 QF045_RS19030 TRAP transporter substrate-binding protein cofit 27 59
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1020 TRAP transporter solute receptor, unknown substrate 3 insig. 24 97
  Castellaniella sp019104865 MT123 ABCV34_RS07845 TRAP transporter substrate-binding protein insig. 26 76
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3788 TRAP transporter solute receptor, unknown substrate 3 insig. 26 74
  Herbaspirillum seropedicae SmR1 HSERO_RS14035 C4-dicarboxylate ABC transporter insig. 26 74
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3130 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 28 74
  Castellaniella sp019104865 MT123 ABCV34_RS13675 TRAP transporter substrate-binding protein insig. 25 91
  Acidovorax sp. GW101-3H11 Ac3H11_3957 TRAP-type C4-dicarboxylate transport system, periplasmic component insig. 28 64
  Variovorax sp. OAS795 ABID97_RS05960 DctP family TRAP transporter solute-binding subunit insig. 25 87
  Pseudomonas simiae WCS417 PS417_17370 C4-dicarboxylate ABC transporter insig. 26 59
  Ralstonia sp. UNC404CL21Col ABZR87_RS15310 TRAP transporter substrate-binding protein sig. 25 83
  Variovorax sp. OAS795 ABID97_RS05815 sialic acid TRAP transporter substrate-binding protein SiaP strong 25 76
  Klebsiella michiganensis M5al BWI76_RS24125 hypothetical protein insig. 28 75
  Azospirillum sp. SherDot2 MPMX19_05801 Solute-binding protein insig. 27 71
  Burkholderia phytofirmans PsJN BPHYT_RS24175 C4-dicarboxylate ABC transporter insig. 25 71
  Azospirillum brasilense Sp245 AZOBR_RS02715 C4-dicarboxylate ABC transporter insig. 29 60
  Dechlorosoma suillum PS Dsui_3155 tripartite ATP-independent periplasmic transporter solute receptor, DctP family sig. 28 70
  Cupriavidus basilensis FW507-4G11 RR42_RS35000 ABC transporter substrate-binding protein insig. 24 87
  Bosea sp. OAE506 ABIE41_RS06665 TRAP transporter substrate-binding protein insig. 25 92
  Paraburkholderia graminis OAS925 ABIE53_006502 tripartite ATP-independent transporter DctP family solute receptor sig. 24 71
  Pantoea sp. MT58 IAI47_03230 TRAP transporter substrate-binding protein insig. 26 63
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16465 TRAP transporter substrate-binding protein cofit 25 63
  Ralstonia solanacearum GMI1000 RS_RS10870 C4-dicarboxylate ABC transporter insig. 25 89
  Dinoroseobacter shibae DFL-12 Dshi_1834 TRAP dicarboxylate transporter- DctP subunit (RefSeq) insig. 21 81
  Azospirillum brasilense Sp245 AZOBR_RS27160 C4-dicarboxylate ABC transporter substrate-binding protein insig. 26 81