Homologs of GFF2473 from Sphingobium sp. HT1-2

FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster
KEGG: hypothetical protein

92 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF2473 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 100 100
  Azospirillum sp. SherDot2 MPMX19_01908 hypothetical protein no data 57 92
  Azospirillum brasilense Sp245 AZOBR_RS00135 hypothetical protein no data 57 92
o Rhodospirillum rubrum S1H Rru_A3709 Protein of unknown function DUF343 (NCBI) no data 53 87
  Xanthobacter sp. DMC5 GFF2435 hypothetical protein no data 54 89
o Caulobacter crescentus NA1000 CCNA_00107 Trm112p-like protein sig. 52 100
o Caulobacter crescentus NA1000 Δfur CCNA_00107 Trm112p-like protein no data 52 100
o Variovorax sp. OAS795 ABID97_RS16965 Trm112 family protein no data 57 89
o Agrobacterium fabrum C58 Atu3696 hypothetical protein no data 47 93
  Bosea sp. OAE506 ABIE41_RS04775 Trm112 family protein no data 56 82
o Acidovorax sp. GW101-3H11 Ac3H11_2386 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 57 89
o Magnetospirillum magneticum AMB-1 AMB_RS00055 hypothetical protein no data 51 93
o Dinoroseobacter shibae DFL-12 Dshi_0033 protein of unknown function DUF343 (RefSeq) insig. 50 92
o Methylophilus sp. DMC18 GFF780 hypothetical protein no data 54 89
o Rhizobium sp. OAE497 ABIE40_RS18440 Trm112 family protein strong 46 100
o Variovorax sp. SCN45 GFF353 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 56 89
o Rhodopseudomonas palustris CGA009 TX73_001405 Trm112 family protein insig. 48 98
o Sinorhizobium meliloti 1021 SMc03803 hypothetical protein no data 49 93
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4507 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 52 89
o Pseudomonas sp. BP01 JOY50_RS16855 Trm112 family protein no data 48 89
o Pseudomonas sp. SVBP6 COO64_RS05870 Trm112 family protein no data 48 89
o Pseudomonas putida KT2440 PP_1901 conserved protein of unknown function, UPF0434 family no data 48 89
o Pseudomonas aeruginosa MRSN321 DY961_RS02070 Trm112 family protein no data 48 89
o Pseudomonas aeruginosa PA14 IKLFDK_15160 UPF0434 protein PA14_25520 no data 48 89
o Pseudomonas aeruginosa PUPa3 DQ20_RS33510 Trm112 family protein no data 48 89
o Pseudomonas sp. S08-1 OH686_22065 Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 46 89
o Pseudomonas sp. RS175 PFR28_03027 hypothetical protein no data 48 89
  Paraburkholderia graminis OAS925 ABIE53_003346 uncharacterized protein YbaR (Trm112 family) no data 50 82
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14145 Trm112 family protein no data 50 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04111 hypothetical protein no data 50 82
  Phaeobacter inhibens DSM 17395 PGA1_c33250 Uncharacterized conserved protein strong 47 87
o Pseudomonas sp. DMC3 GFF4774 hypothetical protein no data 46 89
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2087 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 46 89
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_469 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 46 89
o Pseudomonas fluorescens FW300-N2C3 AO356_20080 hypothetical protein no data 46 89
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5934 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 46 89
  Burkholderia phytofirmans PsJN BPHYT_RS15875 hypothetical protein no data 50 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS02825 Trm112 family protein no data 50 82
o Pseudomonas fluorescens SBW25 PFLU_RS18380 Trm112 family protein no data 46 89
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18380 Trm112 family protein no data 46 89
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03593 hypothetical protein no data 46 89
o Pseudomonas orientalis W4I3 QF045_RS18085 Trm112 family protein no data 46 89
o Pseudomonas simiae WCS417 PS417_16330 hypothetical protein no data 46 89
o Pseudomonas fluorescens FW300-N2E3 AO353_01445 hypothetical protein no data 46 89
  Serratia liquefaciens MT49 IAI46_08695 hypothetical protein no data 46 89
  Dickeya dadantii 3937 DDA3937_RS09850 hypothetical protein no data 44 89
  Pseudomonas segetis P6 ACVTMO_RS10195 Trm112 family protein no data 44 89
  Dickeya dianthicola 67-19 HGI48_RS09860 hypothetical protein no data 43 89
  Dickeya dianthicola ME23 DZA65_RS10190 hypothetical protein no data 43 89
  Castellaniella sp019104865 MT123 ABCV34_RS05350 Trm112 family protein no data 50 82
  Herbaspirillum seropedicae SmR1 HSERO_RS05870 hypothetical protein no data 46 82
  Erwinia amylovora T8 OLJFJH_16100 UPF0434 protein ETA_21370 no data 44 89
  Ralstonia solanacearum PSI07 RPSI07_RS12215 hypothetical protein no data 44 82
  Shewanella sp. ANA-3 Shewana3_2582 hypothetical protein (RefSeq) no data 41 89
  Pantoea sp. MT58 IAI47_12820 hypothetical protein no data 43 89
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS04510 hypothetical protein no data 43 89
  Cupriavidus basilensis FW507-4G11 RR42_RS03455 hypothetical protein no data 42 82
  Rahnella sp. WP5 EX31_RS18200 hypothetical protein no data 44 89
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS05080 hypothetical protein no data 42 82
  Ralstonia solanacearum GMI1000 RS_RS12690 hypothetical protein no data 42 82
  Ralstonia solanacearum UW163 UW163_RS08545 hypothetical protein no data 42 82
  Ralstonia sp. UNC404CL21Col ABZR87_RS00730 Trm112 family protein no data 42 82
  Pectobacterium carotovorum WPP14 HER17_RS12090 hypothetical protein no data 41 89
  Vibrio cholerae E7946 ATCC 55056 CSW01_09400 hypothetical protein no data 39 89
  Pseudomonas stutzeri RCH2 Psest_1675 Uncharacterized conserved protein no data 41 89
  Shewanella oneidensis MR-1 SO2800 conserved hypothetical protein (NCBI ptt file) no data 39 89
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3674 FIG002473: Protein YcaR in KDO2-Lipid A biosynthesis cluster no data 39 89
  Marinobacter adhaerens HP15 HP15_2062 YcaR-like protein sig. 39 89
  Dickeya dianthicola ME23 DZA65_RS07505 Trm112 family protein insig. 38 77
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_20345 UPF0434 protein YcaR no data 42 87
  Erwinia tracheiphila SCR3 LU632_RS09840 hypothetical protein no data 42 87
  Dickeya dianthicola 67-19 HGI48_RS07025 Trm112 family protein cofit 38 77
  Enterobacter asburiae PDN3 EX28DRAFT_2019 Uncharacterized conserved protein no data 38 87
  Enterobacter sp. TBS_079 MPMX20_01575 hypothetical protein no data 38 87
  Dechlorosoma suillum PS Dsui_3264 hypothetical protein insig. 37 89
  Escherichia coli BL21 ECD_00921 peroxide and acid resistance protein, UPF0434 family no data 37 89
  Escherichia fergusonii Becca EFB2_03147 hypothetical protein no data 37 89
  Escherichia coli ECOR27 NOLOHH_22000 ycaR protein YcaR no data 37 89
  Escherichia coli ECOR38 HEPCGN_23085 ycaR protein YcaR no data 37 89
  Escherichia coli ECRC100 OKFHMN_05440 ycaR protein YcaR no data 37 89
  Escherichia coli ECRC101 MCAODC_24830 ycaR protein YcaR no data 37 89
  Escherichia coli ECRC102 NIAGMN_03160 ycaR protein YcaR no data 37 89
  Escherichia coli ECRC62 BNILDI_20255 ycaR protein YcaR no data 37 89
  Escherichia coli ECRC98 JDDGAC_09050 ycaR protein YcaR no data 37 89
  Escherichia coli ECRC99 KEDOAH_22295 ycaR protein YcaR no data 37 89
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02750 hypothetical protein no data 37 89
  Escherichia coli Nissle 1917 ECOLIN_RS04855 protein YcaR no data 37 89
  Escherichia coli BW25113 b0917 ycaR hypothetical protein (NCBI) no data 37 89
  Klebsiella pneumoniae MKP103 KDGMDA_18010 protein YcaR no data 38 82
  Klebsiella pneumoniae MRSN742743 KFA93_RS00875 ycaR;inference=COORDINATES protein YcaR no data 38 82
  Desulfovibrio vulgaris Hildenborough JW710 DVU0656 conserved hypothetical protein (TIGR) no data 40 85
  Mycobacterium tuberculosis H37Rv Rv1684 Conserved hypothetical protein no data 48 82