| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Phaeobacter inhibens DSM 17395 | PGA1_c21080 | | putative flavin monooxygenase | insig. | 100 | 100 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS11665 | | LLM class flavin-dependent oxidoreductase | insig. | 73 | 100 |
| o | Sinorhizobium meliloti 1021 | SMa0794 | | Monoxygenase | insig. | 70 | 100 |
| o | Agrobacterium fabrum C58 | Atu4240 | | alkanal monooxygenase subunit alpha | insig. | 68 | 100 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32560 | | LLM class flavin-dependent oxidoreductase | insig. | 59 | 100 |
| o | Pseudomonas sp. DMC3 | GFF1780 | | Flavin-dependent trigonelline monooxygenase, oxygenase component | cofit | 49 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02461 | | Flavin-dependent trigonelline monooxygenase, oxygenase component | cofit | 49 | 100 |
| o | Pseudomonas putida KT2440 | PP_3644 | | putative Monooxygenase subunit | insig. | 48 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS07675 | | LLM class flavin-dependent oxidoreductase | insig. | 48 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS11350 | | LLM class flavin-dependent oxidoreductase | insig. | 49 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS11350 | | LLM class flavin-dependent oxidoreductase | sig. | 49 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS14310 | | LLM class flavin-dependent oxidoreductase | insig. | 48 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS13290 | | LLM class flavin-dependent oxidoreductase | cofit | 47 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3800 | | Alkanal monooxygenase alpha chain (EC 1.14.14.3) | sig. | 47 | 100 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_25705 | | monooxygenase | insig. | 47 | 100 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_2278 | | luciferase | insig. | 46 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2278 | | luciferase | insig. | 46 | 100 |
| o | Rhizobium sp. OAE497 | ABIE40_RS21545 | | LLM class flavin-dependent oxidoreductase | insig. | 40 | 100 |
| | Agrobacterium fabrum C58 | Atu5227 | | flavin-dependent oxidoreductase | no data | 41 | 100 |
| o | Azospirillum sp. SherDot2 | MPMX19_06822 | | Flavin-dependent trigonelline monooxygenase, oxygenase component | insig. | 42 | 100 |
| | Variovorax sp. SCN45 | GFF4198 | | putative LuxA | insig. | 30 | 71 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01174 | | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) | insig. | 26 | 60 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS14400 | | luciferase | insig. | 30 | 60 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c05350 | | dimodular nonribosomal peptide synthetase | sig. | 28 | 91 |
| o | Xanthobacter sp. DMC5 | GFF4569 | | Limonene 1,2-monooxygenase | insig. | 25 | 100 |
| | Sphingobium sp. HT1-2 | GFF4925 | | COG2141: Coenzyme F420-dependent N5,N10- methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases | cofit | 32 | 41 |
| | Ralstonia solanacearum GMI1000 | RS_RS20185 | | hybrid non-ribosomal peptide synthetase/type I polyketide synthase | insig. | 26 | 93 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2529 | | Alkanal monooxygenase alpha chain (EC 1.14.14.3) | insig. | 24 | 100 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS21200 | | putative FMN-dependent luciferase-like monooxygenase | insig. | 26 | 90 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS05640 | | LLM class flavin-dependent oxidoreductase | insig. | 31 | 42 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS17970 | | LLM class flavin-dependent oxidoreductase | insig. | 29 | 52 |
| | Ralstonia solanacearum UW163 | UW163_RS21160 | | LLM class flavin-dependent oxidoreductase | insig. | 29 | 52 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS32010 | | 5,10-methylene tetrahydromethanopterin reductase | insig. | 24 | 94 |
| | Ralstonia solanacearum GMI1000 | RS_RS23060 | | LLM class flavin-dependent oxidoreductase | sig. | 31 | 40 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS06460 | | LLM class flavin-dependent oxidoreductase | insig. | 34 | 45 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS10880 | | LLM class flavin-dependent oxidoreductase | insig. | 35 | 28 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS10880 | | LLM class flavin-dependent oxidoreductase | insig. | 35 | 28 |
| | Serratia liquefaciens MT49 | IAI46_16875 | | putative FMN-dependent luciferase-like monooxygenase | insig. | 32 | 45 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS10885 | | LLM class flavin-dependent oxidoreductase | insig. | 34 | 31 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS10885 | | LLM class flavin-dependent oxidoreductase | sig. | 34 | 31 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS15695 | | luciferase | insig. | 27 | 43 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1094 | | putative FMN-dependent luciferase-like monooxygenase, KPN_01858 family | insig. | 29 | 50 |
| | Pseudomonas sp. BP01 | JOY50_RS13600 | | LLM class flavin-dependent oxidoreductase | insig. | 31 | 41 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS03015 | | LLM class flavin-dependent oxidoreductase | insig. | 28 | 43 |
| | Dickeya dianthicola 67-19 | HGI48_RS13735 | | LLM class flavin-dependent oxidoreductase | insig. | 25 | 71 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_22765 | | putative FMN-dependent luciferase-like monooxygenase | insig. | 27 | 71 |
| | Dickeya dadantii 3937 | DDA3937_RS21120 | | putative FMN-dependent luciferase-like monooxygenase | insig. | 31 | 37 |
| | Pseudomonas orientalis W4I3 | QF045_RS21460 | | LLM class flavin-dependent oxidoreductase | insig. | 28 | 57 |
| | Dickeya dianthicola 67-19 | HGI48_RS00140 | | putative FMN-dependent luciferase-like monooxygenase | insig. | 30 | 37 |
| | Dickeya dianthicola ME23 | DZA65_RS00160 | | putative FMN-dependent luciferase-like monooxygenase | insig. | 30 | 37 |
| | Dickeya dianthicola ME23 | DZA65_RS14225 | | LLM class flavin-dependent oxidoreductase | insig. | 25 | 71 |
| | Paraburkholderia graminis OAS925 | ABIE53_003303 | | luciferase family oxidoreductase group 1 | sig. | 37 | 24 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04080 | | luciferase family oxidoreductase, group 1 | insig. | 37 | 24 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS08275 | | putative FMN-dependent luciferase-like monooxygenase | insig. | 32 | 37 |
| | Rahnella sp. WP5 | EX31_RS24035 | | putative FMN-dependent luciferase-like monooxygenase | insig. | 28 | 42 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS17085 | | luciferase | insig. | 29 | 35 |
| | Klebsiella michiganensis M5al | BWI76_RS13775 | | putative FMN-dependent luciferase-like monooxygenase | insig. | 29 | 45 |
| | Mycobacterium tuberculosis H37Rv | Rv3618 | | Possible monooxygenase | insig. | 30 | 41 |
| | Variovorax sp. SCN45 | GFF83 | | Alkanal monooxygenase alpha chain (EC 1.14.14.3) | insig. | 28 | 41 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS04800 | | LLM class flavin-dependent oxidoreductase | insig. | 26 | 43 |
| | Ralstonia solanacearum UW163 | UW163_RS08870 | | LLM class flavin-dependent oxidoreductase | insig. | 26 | 43 |
| | Agrobacterium fabrum C58 | Atu3671 | | siderophore biosynthesis protein | insig. | 22 | 99 |
| | Ralstonia solanacearum GMI1000 | RS_RS12360 | | LLM class flavin-dependent oxidoreductase | insig. | 28 | 37 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS00425 | | LLM class flavin-dependent oxidoreductase | insig. | 25 | 43 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS12585 | | LLM class flavin-dependent oxidoreductase | insig. | 27 | 37 |
| | Rahnella sp. WP5 | EX31_RS02500 | | LLM class flavin-dependent oxidoreductase | insig. | 27 | 59 |
| | Pseudomonas sp. BP01 | JOY50_RS06330 | | LLM class flavin-dependent oxidoreductase | insig. | 24 | 44 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4316 | | Alkanal monooxygenase alpha chain (EC 1.14.14.3) | insig. | 36 | 27 |
| | Agrobacterium fabrum C58 | Atu4293 | | monooxygenase | insig. | 30 | 51 |
| | Sphingobium sp. HT1-2 | GFF561 | | hypothetical protein | cofit | 29 | 48 |
| | Rhodopseudomonas palustris CGA009 | TX73_019170 | | LLM class flavin-dependent oxidoreductase | insig. | 27 | 48 |
| | Azospirillum sp. SherDot2 | MPMX19_06873 | | F420-dependent glucose-6-phosphate dehydrogenase | insig. | 25 | 66 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_20455 | | LLM class flavin-dependent oxidoreductase | sig. | 26 | 48 |
| | Mycobacterium tuberculosis H37Rv | Rv3079c | | Conserved protein | insig. | 31 | 41 |
| | Pantoea sp. MT58 | IAI47_20015 | | MsnO8 family LLM class oxidoreductase | insig. | 28 | 31 |
| | Mycobacterium tuberculosis H37Rv | Rv0791c | | Conserved protein | insig. | 27 | 60 |
| | Azospirillum brasilense Sp245 | AZOBR_RS17815 | | bacterial luciferase family protein | insig. | 26 | 53 |
| | Pseudomonas sp. BP01 | JOY50_RS12355 | | LLM class flavin-dependent oxidoreductase | no data | 24 | 40 |
| | Enterobacter sp. TBS_079 | MPMX20_02403 | | hypothetical protein | insig. | 27 | 32 |
| | Sinorhizobium meliloti 1021 | SMc03968 | | oxidoreductase | insig. | 24 | 71 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS12650 | | LLM class flavin-dependent oxidoreductase | insig. | 29 | 41 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS08355 | | MsnO8 family LLM class oxidoreductase | cofit | 26 | 32 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_26470 | | monooxygenase | insig. | 25 | 89 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS01305 | | LLM class flavin-dependent oxidoreductase | cofit | 26 | 47 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_22975 | | alkane 1-monooxygenase | insig. | 31 | 24 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS04765 | | alkanesulfonate monooxygenase | insig. | 31 | 28 |
| | Klebsiella michiganensis M5al | BWI76_RS13525 | | putative luciferase-like monooxygenase | insig. | 22 | 70 |
| | Agrobacterium fabrum C58 | Atu6078 | | conserved hypothetical protein | insig. | 28 | 58 |
| | Methylophilus sp. DMC18 | GFF1974 | | FMNH(2)-dependent dimethylsulfone monooxygenase | insig. | 30 | 28 |
| | Pseudomonas segetis P6 | ACVTMO_RS01815 | | LLM class flavin-dependent oxidoreductase | insig. | 29 | 29 |
| | Pantoea sp. MT58 | IAI47_07200 | | LLM class flavin-dependent oxidoreductase | insig. | 32 | 28 |
| | Ralstonia solanacearum GMI1000 | RS_RS21480 | | TIGR03571 family LLM class oxidoreductase | insig. | 33 | 41 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS23100 | | sugar ABC transporter substrate-binding protein | insig. | 32 | 27 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS03350 | | LLM class flavin-dependent oxidoreductase | insig. | 26 | 52 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1050 | | luciferase family oxidoreductase, group 1 | insig. | 25 | 32 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS03975 | | TIGR03571 family LLM class oxidoreductase | insig. | 33 | 41 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS01325 | | LLM class flavin-dependent oxidoreductase | cofit | 32 | 28 |
| | Pectobacterium carotovorum WPP14 | HER17_RS10330 | | LLM class flavin-dependent oxidoreductase | insig. | 30 | 24 |
| | Shewanella sp. ANA-3 | Shewana3_3090 | | luciferase family protein (RefSeq) | insig. | 27 | 47 |
| | Dickeya dianthicola 67-19 | HGI48_RS18700 | | LLM class flavin-dependent oxidoreductase | insig. | 29 | 24 |