Homologs of GFF2040 from Variovorax sp. SCN45

Putative drug efflux protein
SEED: Putative drug efflux protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF2040 Putative drug efflux protein insig. 100 100
o Pseudomonas sp. RS175 PFR28_03187 hypothetical protein insig. 43 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4221 Permeases of the major facilitator superfamily insig. 44 88
o Pseudomonas simiae WCS417 PS417_09215 MFS transporter insig. 42 91
o Pseudomonas sp. SVBP6 COO64_RS07140 MFS transporter insig. 46 86
o Acinetobacter baumannii LAC-4 RR41_RS06650 MFS transporter insig. 39 93
o Pseudomonas sp. DMC3 GFF2569 hypothetical protein insig. 45 88
o Pseudomonas syringae pv. syringae B728a Psyr_3025 Major facilitator superfamily insig. 43 93
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3025 Major facilitator superfamily insig. 43 93
o Pseudomonas fluorescens SBW25 PFLU_RS09225 MFS transporter insig. 43 88
o Pseudomonas fluorescens SBW25-INTG PFLU_RS09225 MFS transporter insig. 43 88
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01966 hypothetical protein cofit 43 88
o Pseudomonas fluorescens FW300-N2E3 AO353_02545 MFS transporter insig. 44 88
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5762 Permeases of the major facilitator superfamily insig. 42 92
o Rhizobium sp. OAE497 ABIE40_RS02625 MFS transporter insig. 41 87
o Pseudomonas fluorescens FW300-N2C3 AO356_19235 MFS transporter insig. 44 92
o Pseudomonas orientalis W4I3 QF045_RS11885 MFS transporter insig. 42 89
o Rhodospirillum rubrum S1H Rru_A3174 Major facilitator superfamily MFS_1 (NCBI) insig. 45 84
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS07355 MFS transporter cofit 38 86
o Pantoea sp. MT58 IAI47_18895 MFS transporter insig. 37 86
o Methanococcus maripaludis S2 MMP_RS04155 MFS transporter insig. 26 90
o Marinobacter adhaerens HP15 HP15_978 major facilitator superfamily MFS_1 insig. 30 84
o Shewanella loihica PV-4 Shew_3049 major facilitator transporter (RefSeq) insig. 29 89
  Pseudomonas sp. BP01 JOY50_RS12330 MFS transporter insig. 29 78
o Paraburkholderia sabiae LMG 24235 QEN71_RS09320 MFS transporter insig. 30 85
  Pseudomonas fluorescens FW300-N2E3 AO353_28695 MFS transporter insig. 33 59
  Pantoea sp. MT58 IAI47_10570 MFS transporter insig. 27 89
  Serratia liquefaciens MT49 IAI46_17600 MFS transporter insig. 29 80
o Acinetobacter radioresistens SK82 MPMX26_03069 hypothetical protein insig. 27 83
  Pseudomonas sp. BP01 JOY50_RS05505 MFS transporter no data 38 35
  Pseudomonas sp. SVBP6 COO64_RS06560 MFS transporter insig. 29 87
  Pseudomonas fluorescens FW300-N2E3 AO353_15145 hypothetical protein insig. 30 85
  Pseudomonas sp. BP01 JOY50_RS15865 MFS transporter insig. 28 86
o Dickeya dianthicola ME23 DZA65_RS14605 MFS transporter insig. 23 83
  Pseudomonas sp. RS175 PFR28_01789 hypothetical protein insig. 28 81
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_683 Probable MFS transporter insig. 27 81
  Escherichia coli ECRC99 KEDOAH_00375 araJ MFS transporter no data 28 81
  Escherichia coli ECRC100 OKFHMN_27730 ynfM Inner membrane transport protein YnfM cofit 28 81
  Escherichia coli ECRC101 MCAODC_17680 ynfM Inner membrane transport protein YnfM sig. 28 81
  Escherichia coli ECRC102 NIAGMN_00345 ynfM Inner membrane transport protein YnfM cofit 28 81
  Escherichia coli ECRC98 JDDGAC_02320 ynfM Inner membrane transport protein YnfM sig. 28 81
  Escherichia coli BL21 ECD_01565 putative arabinose efflux transporter strong 27 81
  Escherichia fergusonii Becca EFB2_02396 Inner membrane transport protein YnfM insig. 27 81
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02130 Inner membrane transport protein YnfM insig. 27 81
  Escherichia coli BW25113 b1596 ynfM predicted transporter (NCBI) sig. 27 81
  Escherichia coli ECOR38 HEPCGN_06105 ynfM Inner membrane transport protein YnfM insig. 27 81
  Escherichia coli ECRC62 BNILDI_17025 ynfM Inner membrane transport protein YnfM insig. 27 81
  Escherichia coli Nissle 1917 ECOLIN_RS08915 MFS transporter insig. 27 81
  Escherichia coli ECOR27 NOLOHH_18235 araJ MFS transporter insig. 27 81
  Klebsiella pneumoniae MKP103 KDGMDA_21220 MFS transporter insig. 31 74
  Castellaniella sp019104865 MT123 ABCV34_RS06405 MFS transporter insig. 26 80
  Mycobacterium tuberculosis H37Rv Rv3728 Probable conserved two-domain membrane protein insig. 39 32
  Klebsiella michiganensis M5al BWI76_RS15965 MFS transporter strong 30 74
  Pseudomonas simiae WCS417 PS417_11835 MFS transporter insig. 35 27
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1787 Permeases of the major facilitator superfamily insig. 27 78
  Enterobacter sp. TBS_079 MPMX20_02061 Inner membrane transport protein YnfM sig. 28 77
  Pseudomonas fluorescens FW300-N2E3 AO353_17695 MFS transporter insig. 34 24
  Enterobacter asburiae PDN3 EX28DRAFT_1495 Arabinose efflux permease insig. 29 56
  Pseudomonas fluorescens FW300-N2C3 AO356_24970 MFS transporter insig. 33 31
  Pseudomonas sp. RS175 PFR28_04277 Inner membrane transport protein YdhC insig. 31 45
o Pseudomonas aeruginosa PUPa3 DQ20_RS49830 MFS transporter insig. 27 88
  Shewanella oneidensis MR-1 SO4021 transporter, putative (NCBI ptt file) insig. 27 69
o Pseudomonas aeruginosa MRSN321 DY961_RS12295 MFS transporter insig. 27 88
  Ralstonia sp. UNC404CL21Col ABZR87_RS20845 MFS transporter insig. 27 44
  Pseudomonas fluorescens FW300-N2C3 AO356_13255 multidrug transporter CflA insig. 30 39
  Pseudomonas segetis P6 ACVTMO_RS04010 MFS transporter insig. 33 25
  Pseudomonas aeruginosa PA14 IKLFDK_27040 MFS transporter insig. 27 88
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05514 Inner membrane transport protein YdhC cofit 38 25
  Pseudomonas putida KT2440 PP_1354 putative multidrug efflux MFS transporter insig. 29 69
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10715 TCR/Tet family MFS transporter insig. 28 40
  Shewanella sp. ANA-3 Shewana3_3587 multidrug efflux system protein MdtL (RefSeq) insig. 25 50
  Pseudomonas sp. S08-1 OH686_23565 hypothetical protein insig. 51 12
  Pseudomonas fluorescens SBW25 PFLU_RS19685 MFS transporter insig. 32 30
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19685 MFS transporter insig. 32 30
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4565 Multidrug resistance transporter, Bcr/CflA family insig. 28 63
  Sphingobium sp. HT1-2 GFF2762 4-hydroxybenzoate transporter cofit 29 37
  Vibrio cholerae E7946 ATCC 55056 CSW01_15055 Bcr/CflA family drug resistance efflux transporter cofit 28 35
  Bosea sp. OAE506 ABIE41_RS21155 multidrug effflux MFS transporter insig. 37 25
  Pseudomonas aeruginosa MRSN321 DY961_RS27500 MDR family MFS transporter sig. 36 26
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0862 Arabinose efflux permease insig. 32 35
  Pseudomonas sp. DMC3 GFF3471 Multidrug transporter MdfA cofit 31 40
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2915 drug resistance transporter, EmrB/QacA family insig. 33 26
  Pectobacterium carotovorum WPP14 HER17_RS10745 MFS transporter insig. 28 74
  Pseudomonas aeruginosa PA14 IKLFDK_24350 MFS transporter insig. 34 26
  Pseudomonas fluorescens FW300-N2C3 AO356_05300 disulfide bond formation protein DsbA insig. 33 26
  Pseudomonas sp. SVBP6 COO64_RS26260 MDR family MFS transporter insig. 32 26
  Pseudomonas sp. BP01 JOY50_RS15025 MFS transporter insig. 32 40
  Synechococcus elongatus PCC 7942 Synpcc7942_1354 putative export protein insig. 30 27
  Marinobacter adhaerens HP15 HP15_26 drug resistance transporter, Bcr/CflA family protein insig. 27 52
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS08155 Bcr/CflA family drug resistance efflux transporter sig. 34 40
  Burkholderia phytofirmans PsJN BPHYT_RS28670 MFS transporter cofit 32 27
  Escherichia coli ECRC99 KEDOAH_13195 mdtL multidrug efflux MFS transporter MdtL no data 25 69
  Pseudomonas aeruginosa PUPa3 DQ20_RS32050 MDR family MFS transporter insig. 35 26
  Rahnella sp. WP5 EX31_RS05745 MFS transporter insig. 32 31
  Azospirillum brasilense Sp245 AZOBR_RS13080 putative MFS superfamily multidrug transport protein insig. 31 30
  Escherichia fergusonii Becca EFB2_04922 Multidrug resistance protein MdtL insig. 26 69
  Enterobacter sp. TBS_079 MPMX20_04649 Multidrug resistance protein MdtL insig. 26 50
  Pseudomonas sp. RS175 PFR28_00544 Putative multidrug resistance protein MdtD insig. 34 26
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS02360 MFS transporter cofit 28 57
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4338 Putative transport protein cofit 38 20