Homologs of HP15_1253 from Marinobacter adhaerens HP15

DNA polymerase III, epsilon subunit
SEED: DNA polymerase III epsilon subunit (EC 2.7.7.7)
KEGG: DNA polymerase III subunit epsilon

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Marinobacter adhaerens HP15 HP15_1253 DNA polymerase III, epsilon subunit sig. 100 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1136 DNA polymerase III epsilon subunit (EC 2.7.7.7) insig. 44 90
o Pseudomonas stutzeri RCH2 Psest_0349 DNA polymerase III, alpha subunit (gram-positive type) strong 46 87
o Pseudomonas sp. S08-1 OH686_10495 DNA polymerase III epsilon subunit insig. 44 88
o Pseudomonas putida KT2440 PP_0353 Exonuclease strong 44 88
o Pseudomonas fluorescens FW300-N2E3 AO353_07575 DNA polymerase III subunit epsilon sig. 43 90
o Pseudomonas fluorescens SBW25 PFLU_RS27700 3'-5' exonuclease cofit 42 90
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27700 3'-5' exonuclease sig. 42 90
o Pseudomonas sp. BP01 JOY50_RS17885 PolC-type DNA polymerase III insig. 44 87
o Pseudomonas sp. DMC3 GFF86 DNA polymerase III PolC-type cofit 43 88
o Pseudomonas simiae WCS417 PS417_26060 DNA polymerase III subunit epsilon strong 39 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2475 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 42 90
o Pseudomonas sp. RS175 PFR28_04113 DNA polymerase III PolC-type insig. 42 89
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4749 DNA polymerase III epsilon subunit (EC 2.7.7.7) insig. 42 89
o Pseudomonas fluorescens FW300-N2C3 AO356_14085 DNA polymerase III subunit epsilon sig. 42 88
o Pseudomonas sp. SVBP6 COO64_RS22775 PolC-type DNA polymerase III insig. 42 82
o Pseudomonas syringae pv. syringae B728a Psyr_4703 Exonuclease no data 41 90
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4703 Exonuclease no data 41 90
o Dechlorosoma suillum PS Dsui_2005 DNA polymerase III epsilon subunit-like 3'-5' exonuclease cofit 38 82
  Shewanella amazonensis SB2B Sama_1525 DNA polymerase III epsilon subunit-related 3'-5' exonuclease-like protein (RefSeq) strong 31 67
  Azospirillum brasilense Sp245 AZOBR_RS14205 exonuclease strong 32 80
  Fusobacterium nucleatum SB010 HUW76_02840 PolC-type DNA polymerase III no data 28 83
  Azospirillum sp. SherDot2 MPMX19_01859 3'-5' exonuclease DinG insig. 34 74
  Magnetospirillum magneticum AMB-1 AMB_RS07795 DNA polymerase III subunit epsilon insig. 29 79
  Cellulophaga baltica 18 M666_RS12900 3'-5' exonuclease insig. 32 78
  Vibrio cholerae E7946 ATCC 55056 CSW01_01525 3'-5' exonuclease insig. 29 76
  Xanthobacter sp. DMC5 GFF1991 3'-5' exonuclease DinG insig. 31 82
  Shewanella loihica PV-4 Shew_0050 DNA polymerase III subunit epsilon (RefSeq) insig. 29 76
  Pseudomonas aeruginosa PA14 IKLFDK_16455 3'-5' exonuclease insig. 30 67
  Shewanella sp. ANA-3 Shewana3_1577 exonuclease, RNase T and DNA polymerase III (RefSeq) sig. 32 69
  Ralstonia sp. UNC404CL21Col ABZR87_RS07945 3'-5' exonuclease insig. 31 73
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00110 DNA polymerase III subunit epsilon insig. 25 69
  Desulfovibrio vulgaris Miyazaki F DvMF_0318 Exonuclease RNase T and DNA polymerase III (RefSeq) insig. 32 58
  Shewanella oneidensis MR-1 SO2855 exonuclease (NCBI ptt file) insig. 38 41
  Shewanella loihica PV-4 Shew_2368 exonuclease, RNase T and DNA polymerase III (RefSeq) no data 32 71
  Rhodospirillum rubrum S1H Rru_A0633 Exonuclease (NCBI) insig. 25 62
  Marinobacter adhaerens HP15 HP15_3950 exonuclease, RNase T and DNA polymerase III insig. 27 84
  Bifidobacterium breve UCC2003 BBR_RS13650 3'-5' exonuclease insig. 29 68
  Vibrio cholerae E7946 ATCC 55056 CSW01_06520 3'-5' exonuclease insig. 27 74
  Azospirillum sp. SherDot2 MPMX19_01560 3'-5' exonuclease DinG strong 30 77
  Rhodospirillum rubrum S1H Rru_A3611 DNA polymerase III, epsilon subunit (NCBI) no data 30 69
  Vibrio cholerae E7946 ATCC 55056 CSW01_11380 DNA polymerase III subunit epsilon no data 28 80
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13650 DNA polymerase III subunit epsilon no data 26 70
  Shewanella loihica PV-4 Shew_1871 DNA polymerase III, epsilon subunit (RefSeq) no data 29 73
  Bacteroides ovatus ATCC 8483 BACOVA_00857 putative DNA polymerase III, epsilon subunit insig. 25 71
  Azospirillum sp. SherDot2 MPMX19_02042 3'-5' exonuclease DinG insig. 29 69
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1270 DNA polymerase III, alpha subunit (gram-positive type) strong 23 77
  Xanthobacter sp. DMC5 GFF3739 DNA polymerase III subunit epsilon no data 31 69
  Phocaeicola dorei CL03T12C01 ABI39_RS15285 3'-5' exonuclease insig. 26 67
  Dickeya dadantii 3937 DDA3937_RS16045 DNA polymerase III subunit epsilon no data 29 69
  Rahnella sp. WP5 EX31_RS21175 DNA polymerase III subunit epsilon no data 27 71
  Dickeya dianthicola ME23 DZA65_RS17250 DNA polymerase III subunit epsilon no data 29 69
  Azospirillum brasilense Sp245 AZOBR_RS01775 DNA polymerase III subunit epsilon sig. 29 76
  Klebsiella michiganensis M5al BWI76_RS05455 DNA polymerase III subunit epsilon no data 27 70
  Dickeya dianthicola 67-19 HGI48_RS16165 DNA polymerase III subunit epsilon no data 29 69
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12830 3'-5' exonuclease insig. 25 77
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4954 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 31 73
  Erwinia amylovora T8 OLJFJH_18625 DNA polymerase III subunit epsilon no data 27 70
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07430 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 27 72
  Azospirillum sp. SherDot2 MPMX19_02562 DNA polymerase III subunit epsilon no data 30 69
  Mycobacterium tuberculosis H37Rv Rv2191 Conserved hypothetical protein insig. 26 88
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01780 3'-5' exonuclease strong 26 67
  Pantoea sp. MT58 IAI47_15325 DNA polymerase III subunit epsilon no data 28 69
  Enterobacter asburiae PDN3 EX28DRAFT_2679 DNA polymerase III, epsilon subunit, Proteobacterial no data 27 70
  Acidovorax sp. GW101-3H11 Ac3H11_4106 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 30 66
  Bacteroides thetaiotaomicron VPI-5482 BT1431 putative DNA polymerase III epsilon chain (NCBI ptt file) insig. 25 72
  Caulobacter crescentus NA1000 CCNA_00005 DNA polymerase III, epsilon chain no data 30 69
  Caulobacter crescentus NA1000 Δfur CCNA_00005 DNA polymerase III, epsilon chain no data 30 69
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4047 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 29 69
  Variovorax sp. SCN45 GFF953 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 28 69
  Pseudomonas sp. S08-1 OH686_03565 DNA polymerase III, epsilon subunit no data 28 70
  Acinetobacter radioresistens SK82 MPMX26_02275 Ribonuclease H cofit 31 43
  Desulfovibrio vulgaris Hildenborough JW710 DVU0443 exonuclease, putative (Keith Keller) insig. 31 67
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02300 DNA polymerase III subunit epsilon no data 30 75
  Ralstonia solanacearum UW163 UW163_RS11425 DNA polymerase III subunit epsilon no data 30 75
  Ralstonia solanacearum PSI07 RPSI07_RS15070 DNA polymerase III subunit epsilon no data 30 75
  Variovorax sp. OAS795 ABID97_RS14035 DNA polymerase III subunit epsilon no data 29 69
  Enterobacter sp. TBS_079 MPMX20_00900 DNA polymerase III subunit epsilon no data 27 69
  Cupriavidus basilensis FW507-4G11 RR42_RS25820 DNA polymerase III subunit epsilon insig. 24 68
  Rhizobium sp. OAE497 ABIE40_RS26835 3'-5' exonuclease insig. 35 48
  Ralstonia solanacearum GMI1000 RS_RS09455 DNA polymerase III subunit epsilon no data 31 75
  Pectobacterium carotovorum WPP14 HER17_RS05470 DNA polymerase III subunit epsilon no data 28 69
  Alteromonas macleodii MIT1002 MIT1002_03947 DNA polymerase III PolC-type insig. 26 71
  Shewanella oneidensis MR-1 SO2245 dnaQ-1 DNA polymerase III, epsilon subunit (NCBI ptt file) sig. 31 47
  Alteromonas macleodii MIT1002 MIT1002_03505 DNA polymerase III PolC-type strong 25 76
  Phaeobacter inhibens DSM 17395 PGA1_c35170 DNA polymerase III subunit epsilon strong 29 43
  Kangiella aquimarina DSM 16071 B158DRAFT_1064 DNA polymerase III, epsilon subunit, Proteobacterial strong 34 43
  Escherichia coli BL21 ECD_00208 DNA polymerase III epsilon subunit no data 28 69
  Escherichia coli ECRC100 OKFHMN_09965 dnaQ DNA polymerase III subunit epsilon no data 28 69
  Escherichia coli ECRC101 MCAODC_00480 dnaQ DNA polymerase III subunit epsilon no data 28 69
  Escherichia coli ECRC102 NIAGMN_07815 dnaQ DNA polymerase III subunit epsilon no data 28 69
  Escherichia coli ECRC98 JDDGAC_13560 dnaQ DNA polymerase III subunit epsilon no data 28 69
  Escherichia coli ECRC99 KEDOAH_18190 dnaQ DNA polymerase III subunit epsilon no data 28 69
  Escherichia coli Nissle 1917 ECOLIN_RS01175 DNA polymerase III subunit epsilon no data 28 69
  Escherichia coli BW25113 b0215 dnaQ DNA polymerase III subunit epsilon (NCBI) no data 28 69
  Pseudomonas simiae WCS417 PS417_12235 DNA polymerase III subunit epsilon no data 28 81
  Agrobacterium fabrum C58 Atu0005 DNA polymerase III, epsilon chain no data 27 69
  Pseudomonas putida KT2440 PP_4768 Exonuclease insig. 29 69
  Serratia liquefaciens MT49 IAI46_04150 DNA polymerase III subunit epsilon no data 26 71
  Escherichia coli ECOR27 NOLOHH_02310 dnaQ DNA polymerase III subunit epsilon no data 28 69