Homologs of Echvi_0827 from Echinicola vietnamensis KMM 6221, DSM 17526

Site-specific recombinase XerD
SEED: Integrase, site-specific recombinase
KEGG: integrase/recombinase XerC

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0827 Site-specific recombinase XerD insig. 100 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19035 integrase no data 49 99
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02835 integrase strong 51 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17800 tyrosine-type recombinase/integrase insig. 48 99
o Bacteroides thetaiotaomicron VPI-5482 BT2742 integrase, site-specific recombinase (NCBI ptt file) insig. 46 100
o Bacteroides ovatus ATCC 8483 BACOVA_01050 site-specific recombinase, phage integrase family/ribosomal subunit interface protein insig. 43 100
o Phocaeicola dorei CL03T12C01 ABI39_RS03835 tyrosine-type recombinase/integrase no data 44 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09445 tyrosine-type recombinase/integrase insig. 44 99
o Bacteroides stercoris CC31F HMPREF1181_RS00625 tyrosine recombinase XerC cofit 42 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS10885 tyrosine recombinase XerC sig. 42 99
  Shewanella oneidensis MR-1 SO0950 xerD integrase/recombinase XerD (NCBI ptt file) strong 34 100
  Azospirillum sp. SherDot2 MPMX19_02643 Tyrosine recombinase XerD no data 35 100
  Pectobacterium carotovorum WPP14 HER17_RS17890 site-specific tyrosine recombinase XerD strong 35 99
  Rhizobium sp. OAE497 ABIE40_RS17685 site-specific tyrosine recombinase XerD sig. 34 99
  Shewanella sp. ANA-3 Shewana3_3331 tyrosine recombinase XerD (RefSeq) strong 34 100
  Serratia liquefaciens MT49 IAI46_20730 site-specific tyrosine recombinase XerD insig. 35 99
  Marinobacter adhaerens HP15 HP15_250 site-specific tyrosine recombinase XerC strong 34 100
  Desulfovibrio vulgaris Hildenborough JW710 DVU1654 xerD site-specific recombinase, phage integrase family (TIGR) sig. 33 98
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.847.1 Site-specific tyrosine recombinase no data 32 99
  Lysobacter sp. OAE881 ABIE51_RS03035 tyrosine recombinase XerC strong 33 99
  Marinobacter adhaerens HP15 HP15_762 site-specific tyrosine recombinase XerD insig. 31 100
  Dickeya dianthicola 67-19 HGI48_RS03440 site-specific tyrosine recombinase XerD insig. 33 99
  Dickeya dianthicola ME23 DZA65_RS03485 site-specific tyrosine recombinase XerD no data 33 99
  Pseudomonas sp. S08-1 OH686_17750 tyrosine recombinase XerD insig. 33 99
  Shewanella loihica PV-4 Shew_0770 tyrosine recombinase XerD (RefSeq) strong 35 99
  Castellaniella sp019104865 MT123 ABCV34_RS00515 site-specific tyrosine recombinase XerD insig. 34 99
  Sinorhizobium meliloti 1021 SMc00691 site-specific tyrosine recombinase XerD sig. 34 99
  Escherichia coli ECRC102 NIAGMN_17335 xerD site-specific tyrosine recombinase XerD no data 34 99
  Shewanella loihica PV-4 Shew_0325 tyrosine recombinase XerC (RefSeq) sig. 36 99
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2991 Tyrosine recombinase XerD cofit 34 99
  Dickeya dadantii 3937 DDA3937_RS03300 site-specific tyrosine recombinase XerD insig. 32 99
  Escherichia coli BL21 ECD_02726 site-specific tyrosine recombinase strong 34 99
  Escherichia fergusonii Becca EFB2_01007 Tyrosine recombinase XerD strong 34 99
  Escherichia coli ECOR27 NOLOHH_11495 xerD site-specific tyrosine recombinase XerD no data 34 99
  Escherichia coli ECRC101 OKFHMN_19570 xerD site-specific tyrosine recombinase XerD no data 34 99
  Escherichia coli ECRC101 MCAODC_10090 xerD site-specific tyrosine recombinase XerD no data 34 99
  Escherichia coli ECRC62 BNILDI_10025 xerD site-specific tyrosine recombinase XerD insig. 34 99
  Escherichia coli ECRC98 JDDGAC_23210 xerD site-specific tyrosine recombinase XerD no data 34 99
  Escherichia coli ECRC99 KEDOAH_08570 xerD site-specific tyrosine recombinase XerD no data 34 99
  Escherichia coli Nissle 1917 ECOLIN_RS16125 site-specific tyrosine recombinase XerD cofit 34 99
  Escherichia coli BW25113 b2894 xerD site-specific tyrosine recombinase XerD (NCBI) strong 34 99
  Enterobacter sp. TBS_079 MPMX20_03753 Tyrosine recombinase XerD strong 34 99
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15025 tyrosine recombinase XerC strong 33 99
  Enterobacter asburiae PDN3 EX28DRAFT_2945 tyrosine recombinase XerD insig. 33 99
o Agrobacterium fabrum C58 Atu3629 site-specific tyrosine recombinase XerD no data 33 100
  Rahnella sp. WP5 EX31_RS13480 site-specific tyrosine recombinase XerD strong 33 99
  Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 31 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04126 integrase/recombinase XerD no data 32 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00821 Tyrosine recombinase XerD sig. 34 98
  Escherichia coli ECOR38 HEPCGN_18860 xerD site-specific tyrosine recombinase XerD cofit 34 99
  Dechlorosoma suillum PS Dsui_1217 tyrosine recombinase XerD cofit 33 99
  Alteromonas macleodii MIT1002 MIT1002_00786 Tyrosine recombinase XerD insig. 35 99
  Rhodanobacter denitrificans MT42 LRK55_RS08300 tyrosine recombinase XerC strong 32 99
  Pseudomonas putida KT2440 PP_1468 Tyrosine recombinase XerD strong 31 99
  Pantoea sp. MT58 IAI47_03820 site-specific tyrosine recombinase XerD strong 32 99
  Klebsiella michiganensis M5al BWI76_RS23815 site-specific tyrosine recombinase XerD no data 33 99
  Azospirillum sp. SherDot2 MPMX19_02110 Tyrosine recombinase XerC no data 33 100
  Vibrio cholerae E7946 ATCC 55056 CSW01_12250 site-specific tyrosine recombinase XerD strong 32 99
  Dechlorosoma suillum PS Dsui_0651 tyrosine recombinase XerC insig. 32 99
  Rhodospirillum rubrum S1H Rru_A3738 Phage integrase (NCBI) no data 31 99
  Burkholderia phytofirmans PsJN BPHYT_RS15950 tyrosine recombinase XerD sig. 31 99
  Desulfovibrio vulgaris Miyazaki F DvMF_0359 tyrosine recombinase XerD (RefSeq) strong 34 99
  Pseudomonas fluorescens FW300-N2C3 AO356_06385 recombinase XerD strong 32 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3145 Tyrosine recombinase XerD no data 32 99
  Shewanella sp. ANA-3 Shewana3_0393 tyrosine recombinase XerC (RefSeq) strong 34 100
  Pseudomonas fluorescens SBW25 PFLU_RS24560 site-specific tyrosine recombinase XerD sig. 32 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24560 site-specific tyrosine recombinase XerD strong 32 99
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08535 tyrosine recombinase XerC insig. 32 99
  Shewanella amazonensis SB2B Sama_3247 integrase/recombinase XerC (RefSeq) strong 34 99
  Pseudomonas simiae WCS417 PS417_22895 tyrosine recombinase XerD strong 31 99
  Paraburkholderia graminis OAS925 ABIE53_000426 integrase/recombinase XerC no data 31 100
  Agrobacterium fabrum C58 Atu2628 site-specific recombinase no data 33 99
  Dechlorosoma suillum PS Dsui_2597 tyrosine recombinase XerD cofit 32 99
  Shewanella amazonensis SB2B Sama_2739 integrase/recombinase XerD (RefSeq) strong 31 99
  Rhizobium sp. OAE497 ABIE40_RS17950 tyrosine recombinase XerC insig. 32 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3011 Tyrosine recombinase XerD insig. 31 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS00355 tyrosine recombinase XerC no data 30 100
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5461 Tyrosine recombinase XerD insig. 32 99
  Pseudomonas fluorescens FW300-N2E3 AO353_04365 recombinase XerD strong 32 99
  Pseudomonas stutzeri RCH2 Psest_3129 tyrosine recombinase XerD insig. 31 99
  Paraburkholderia graminis OAS925 ABIE53_003361 integrase/recombinase XerD strong 31 99
  Variovorax sp. OAS795 ABID97_RS20265 site-specific tyrosine recombinase XerD insig. 32 99
  Variovorax sp. SCN45 GFF2772 Site-specific tyrosine recombinase XerD strong 31 99
  Burkholderia phytofirmans PsJN BPHYT_RS01655 tyrosine recombinase XerC no data 30 100
  Klebsiella michiganensis M5al BWI76_RS01210 tyrosine recombinase XerC strong 33 99
  Escherichia coli ECOR27 NOLOHH_06550 xerC tyrosine recombinase XerC no data 33 99
  Escherichia coli ECOR38 HEPCGN_13125 xerC tyrosine recombinase XerC insig. 33 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04239 Tyrosine recombinase XerC insig. 33 99
  Escherichia coli Nissle 1917 ECOLIN_RS21875 tyrosine recombinase XerC cofit 33 99
  Escherichia coli BW25113 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) strong 33 99
  Pseudomonas syringae pv. syringae B728a Psyr_0185 tyrosine recombinase XerC subunit sig. 31 100
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0185 tyrosine recombinase XerC subunit sig. 31 100
  Pseudomonas sp. RS175 PFR28_00331 Tyrosine recombinase XerD strong 31 99
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1721 Tyrosine recombinase XerD strong 31 99
  Rhodospirillum rubrum S1H Rru_A1220 Phage integrase (NCBI) no data 31 100
  Escherichia fergusonii Becca EFB2_04826 Tyrosine recombinase XerC strong 33 99
  Escherichia coli ECRC62 BNILDI_04985 xerC tyrosine recombinase XerC no data 33 99
o Rhodopseudomonas palustris CGA009 TX73_000945 tyrosine recombinase XerC sig. 32 99
  Ralstonia solanacearum PSI07 RPSI07_RS23690 tyrosine recombinase XerC insig. 32 100
  Erwinia tracheiphila SCR3 LU632_RS05975 xerD site-specific tyrosine recombinase XerD no data 31 100