| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_18815 | | AraC family transcriptional regulator | insig. | 100 | 100 |
| o | Shewanella sp. ANA-3 | Shewana3_0925 | | AraC family transcriptional regulator (RefSeq) | sig. | 57 | 96 |
| o | Shewanella oneidensis MR-1 | SO1092 | | transcriptional regulator, AraC/XylS family (NCBI ptt file) | insig. | 55 | 96 |
| o | Rahnella sp. WP5 | EX31_RS19615 | | helix-turn-helix transcriptional regulator | insig. | 48 | 93 |
| o | Erwinia amylovora T8 | OLJFJH_11225 | | AraC family transcriptional regulator | insig. | 49 | 92 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_02670 | | AraC family transcriptional regulator | sig. | 41 | 91 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS25065 | | helix-turn-helix transcriptional regulator | sig. | 41 | 91 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS57520 | | helix-turn-helix transcriptional regulator | sig. | 41 | 91 |
| o | Serratia liquefaciens MT49 | IAI46_17855 | | helix-turn-helix transcriptional regulator | insig. | 44 | 92 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS00185 | | helix-turn-helix transcriptional regulator | cofit | 42 | 94 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS02820 | | AraC family transcriptional regulator | insig. | 42 | 92 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS02820 | | AraC family transcriptional regulator | insig. | 42 | 92 |
| o | Pseudomonas simiae WCS417 | PS417_02760 | | AraC family transcriptional regulator | insig. | 42 | 92 |
| o | Pseudomonas orientalis W4I3 | QF045_RS05795 | | helix-turn-helix transcriptional regulator | insig. | 41 | 98 |
| o | Variovorax sp. SCN45 | GFF4545 | | Transcriptional regulator, AraC family | insig. | 39 | 94 |
| o | Pseudomonas sp. DMC3 | GFF3270 | | HTH-type transcriptional regulator NimR | cofit | 39 | 92 |
| o | Pseudomonas sp. SVBP6 | COO64_RS18105 | | helix-turn-helix transcriptional regulator | insig. | 40 | 92 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1362 | | Transcriptional regulator, AraC family | insig. | 38 | 92 |
| o | Ralstonia solanacearum GMI1000 | RS_RS24975 | | AraC family transcriptional regulator | insig. | 40 | 91 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_100 | | Transcriptional regulator, AraC family | insig. | 36 | 97 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS35075 | | AraC family transcriptional regulator | insig. | 39 | 98 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_13450 | | AraC family transcriptional regulator | insig. | 37 | 92 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS07665 | | AraC family transcriptional regulator | insig. | 41 | 90 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS23475 | | AraC family transcriptional regulator | insig. | 40 | 91 |
| o | Ralstonia solanacearum UW163 | UW163_RS16725 | | AraC family transcriptional regulator | insig. | 40 | 91 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS23255 | | helix-turn-helix transcriptional regulator | insig. | 39 | 91 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_475 | | Transcriptional regulator, AraC family | insig. | 37 | 94 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_22960 | | AraC family transcriptional regulator | insig. | 36 | 94 |
| o | Pseudomonas putida KT2440 | PP_4852 | | Transcriptional regulator, AraC family | sig. | 41 | 92 |
| o | Pseudomonas sp. BP01 | JOY50_RS17460 | | helix-turn-helix transcriptional regulator | insig. | 40 | 92 |
| o | Agrobacterium fabrum C58 | Atu5338 | | AraC family transcriptional regulator | no data | 36 | 92 |
| o | Acinetobacter baumannii LAC-4 | RR41_RS02400 | | helix-turn-helix transcriptional regulator | insig. | 39 | 85 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03519 | | HTH-type transcriptional regulator NimR | cofit | 35 | 91 |
| | Pseudomonas orientalis W4I3 | QF045_RS17905 | | helix-turn-helix transcriptional regulator | insig. | 35 | 97 |
| | Pseudomonas sp. DMC3 | GFF1786 | | HTH-type transcriptional regulator NimR | insig. | 35 | 91 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18225 | | helix-turn-helix transcriptional regulator | insig. | 35 | 91 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18225 | | helix-turn-helix transcriptional regulator | sig. | 35 | 91 |
| | Pseudomonas simiae WCS417 | PS417_16195 | | AraC family transcriptional regulator | insig. | 35 | 91 |
| o | Pseudomonas segetis P6 | ACVTMO_RS01750 | | AraC family transcriptional regulator | insig. | 32 | 91 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3490 | | Transcriptional regulator, AraC family | insig. | 34 | 91 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_08080 | | AraC family transcriptional regulator | insig. | 34 | 90 |
| | Pseudomonas sp. SVBP6 | COO64_RS22605 | | AraC family transcriptional regulator | insig. | 33 | 92 |
| | Pseudomonas sp. SVBP6 | COO64_RS07745 | | helix-turn-helix domain-containing protein | insig. | 33 | 91 |
| o | Pseudomonas stutzeri RCH2 | Psest_4208 | | AraC-type DNA-binding domain-containing proteins | insig. | 34 | 90 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_0649 | | transcriptional regulator, AraC family | insig. | 34 | 90 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0649 | | transcriptional regulator, AraC family | insig. | 34 | 90 |
| o | Desulfovibrio vulgaris Miyazaki F | DvMF_0808 | | transcriptional regulator, AraC family (RefSeq) | insig. | 33 | 92 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1268 | | Transcriptional regulator, AraC family | insig. | 34 | 91 |
| o | Rhodospirillum rubrum S1H | Rru_A2490 | | Transcriptional Regulator, AraC family (NCBI) | insig. | 34 | 87 |
| o | Pseudomonas sp. RS175 | PFR28_05241 | | HTH-type transcriptional regulator NimR | insig. | 33 | 92 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS27100 | | helix-turn-helix transcriptional regulator | sig. | 32 | 99 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_24730 | | AraC family transcriptional regulator | sig. | 32 | 99 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS31630 | | helix-turn-helix transcriptional regulator | sig. | 32 | 99 |
| o | Enterobacter sp. TBS_079 | MPMX20_01835 | | HTH-type transcriptional regulator NimR | insig. | 33 | 86 |
| | Serratia liquefaciens MT49 | IAI46_02585 | | helix-turn-helix transcriptional regulator | insig. | 29 | 94 |
| o | Klebsiella michiganensis M5al | BWI76_RS11455 | | AraC family transcriptional regulator | insig. | 34 | 86 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_13890 | | AraC family transcriptional regulator | insig. | 33 | 91 |
| | Klebsiella michiganensis M5al | BWI76_RS21700 | | AraC family transcriptional regulator | insig. | 34 | 86 |
| | Acinetobacter baumannii LAC-4 | RR41_RS18110 | | helix-turn-helix domain-containing protein | insig. | 31 | 86 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_19080 | | AraC family transcriptional regulator | insig. | 34 | 86 |
| | Variovorax sp. SCN45 | GFF1485 | | Transcriptional regulator, AraC family | insig. | 33 | 84 |
| | Pseudomonas simiae WCS417 | PS417_15525 | | AraC family transcriptional regulator | insig. | 30 | 92 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_1780 | | AraC-type DNA-binding domain-containing proteins | insig. | 32 | 86 |
| | Enterobacter sp. TBS_079 | MPMX20_01145 | | HTH-type transcriptional regulator NimR | insig. | 31 | 86 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS21185 | | transcriptional regulator | insig. | 30 | 94 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS31815 | | AraC family transcriptional regulator | insig. | 33 | 84 |
| | Pseudomonas sp. BP01 | JOY50_RS23250 | | helix-turn-helix transcriptional regulator | insig. | 32 | 94 |
| o | Acinetobacter radioresistens SK82 | MPMX26_00111 | | HTH-type transcriptional regulator NimR | no data | 30 | 91 |
| | Pseudomonas putida KT2440 | PP_0583 | | Transcriptional regulator, AraC family | insig. | 33 | 94 |
| o | Rhodopseudomonas palustris CGA009 | TX73_016840 | | helix-turn-helix transcriptional regulator | insig. | 27 | 92 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS17510 | | helix-turn-helix transcriptional regulator | insig. | 31 | 87 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS17510 | | helix-turn-helix transcriptional regulator | insig. | 31 | 87 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2415 | | AraC-type DNA-binding domain-containing proteins | insig. | 32 | 90 |
| | Rhodospirillum rubrum S1H | Rru_A0140 | | Transcriptional Regulator, AraC family (NCBI) | insig. | 30 | 91 |
| o | Escherichia coli BW25113 | b1790 | yeaM | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 32 | 86 |
| o | Azospirillum sp. SherDot2 | MPMX19_04533 | | HTH-type transcriptional regulator NimR | insig. | 31 | 90 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03501 | | HTH-type transcriptional regulator NimR | cofit | 30 | 86 |
| | Rhodopseudomonas palustris CGA009 | TX73_024245 | | helix-turn-helix transcriptional regulator | insig. | 31 | 85 |
| | Rhodopseudomonas palustris CGA009 | TX73_014025 | | helix-turn-helix transcriptional regulator | insig. | 29 | 86 |
| | Azospirillum brasilense Sp245 | AZOBR_RS28585 | | AraC family transcriptional regulator | insig. | 29 | 90 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01943 | | HTH-type transcriptional regulator NimR | insig. | 32 | 86 |
| o | Escherichia fergusonii Becca | EFB2_02205 | | HTH-type transcriptional regulator NimR | insig. | 32 | 86 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS09975 | | DNA-binding transcriptional regulator NimR | insig. | 32 | 86 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_2138 | | transcriptional regulator, AraC family | insig. | 30 | 85 |
| o | Escherichia coli ECOR38 | HEPCGN_05070 | nimR | DNA-binding transcriptional regulator NimR | insig. | 32 | 86 |
| | Variovorax sp. SCN45 | GFF4824 | | Transcriptional regulator, AraC family | insig. | 32 | 90 |
| o | Escherichia coli ECOR27 | NOLOHH_17210 | nimR | DNA-binding transcriptional regulator NimR | insig. | 32 | 86 |
| o | Escherichia coli ECRC62 | BNILDI_15995 | nimR | DNA-binding transcriptional regulator NimR | insig. | 32 | 86 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06000 | | transcriptional regulator, AraC family | insig. | 31 | 89 |
| o | Paraburkholderia graminis OAS925 | ABIE53_001863 | | AraC-like DNA-binding protein | sig. | 30 | 87 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_27415 | | AraC family transcriptional regulator | insig. | 30 | 86 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_21325 | | AraC family transcriptional regulator | insig. | 33 | 86 |
| o | Escherichia coli ECRC100 | OKFHMN_26680 | nimR | DNA-binding transcriptional regulator NimR | insig. | 32 | 86 |
| o | Escherichia coli ECRC101 | MCAODC_18730 | nimR | DNA-binding transcriptional regulator NimR | insig. | 32 | 86 |
| o | Escherichia coli ECRC102 | NIAGMN_01385 | nimR | DNA-binding transcriptional regulator NimR | insig. | 32 | 86 |
| o | Escherichia coli ECRC98 | JDDGAC_01255 | nimR | DNA-binding transcriptional regulator NimR | insig. | 32 | 86 |
| o | Escherichia coli ECRC99 | KEDOAH_01430 | nimR | DNA-binding transcriptional regulator NimR | no data | 32 | 86 |
| | Klebsiella michiganensis M5al | BWI76_RS05880 | | AraC-type DNA-binding domain-containing protein | sig. | 29 | 93 |
| | Rhodospirillum rubrum S1H | Rru_A2335 | | Transcriptional Regulator, AraC family (NCBI) | cofit | 30 | 90 |
| o | Escherichia coli BL21 | ECD_01759 | | putative DNA-binding transcriptional regulator | no data | 31 | 86 |