Homologs of Atu4716 from Agrobacterium fabrum C58

LuxR family transcriptional regulator
SEED: Sensory box transcriptional regulator, LuxR family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu4716 LuxR family transcriptional regulator insig. 100 100
o Rhizobium sp. OAE497 ABIE40_RS29405 PAS domain S-box protein insig. 68 83
o Pseudomonas aeruginosa MRSN321 DY961_RS22680 helix-turn-helix transcriptional regulator insig. 49 99
o Pseudomonas aeruginosa PA14 IKLFDK_22760 helix-turn-helix transcriptional regulator sig. 49 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS36655 helix-turn-helix transcriptional regulator sig. 49 99
o Xanthobacter sp. DMC5 GFF4116 hypothetical protein insig. 47 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01738 PAS domain S-box-containing protein insig. 47 99
o Pseudomonas simiae WCS417 PS417_10605 LuxR family transcriptional regulator insig. 47 97
o Pseudomonas fluorescens SBW25 PFLU_RS10665 helix-turn-helix transcriptional regulator insig. 47 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS10665 helix-turn-helix transcriptional regulator sig. 47 97
o Serratia liquefaciens MT49 IAI46_12590 helix-turn-helix transcriptional regulator insig. 46 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02217 HTH-type transcriptional regulator MalT cofit 46 97
o Pseudomonas orientalis W4I3 QF045_RS12575 helix-turn-helix transcriptional regulator insig. 46 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4524 Sensory box transcriptional regulator, LuxR family no data 46 98
o Pseudomonas sp. DMC3 GFF1689 HTH-type transcriptional regulator MalT cofit 47 97
o Pseudomonas fluorescens FW300-N2C3 AO356_23110 LuxR family transcriptional regulator insig. 47 97
o Pseudomonas sp. RS175 PFR28_02434 HTH-type transcriptional regulator MalT insig. 46 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_501 Sensory box transcriptional regulator, LuxR family insig. 47 97
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3500 Sensory box transcriptional regulator, LuxR family insig. 53 26
  Pseudomonas segetis P6 ACVTMO_RS15240 PAS domain S-box protein insig. 29 59
  Pseudomonas sp. SVBP6 COO64_RS05675 EAL domain-containing protein insig. 27 50
  Pseudomonas aeruginosa PUPa3 DQ20_RS36445 EAL domain-containing protein insig. 28 57
  Pseudomonas sp. BP01 JOY50_RS16640 PAS domain S-box protein insig. 28 50
  Pseudomonas aeruginosa MRSN321 DY961_RS22900 EAL domain-containing protein insig. 28 57
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase insig. 28 57
  Pseudomonas sp. S08-1 OH686_04490 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 28 55
  Pseudomonas putida KT2440 PP_1983 PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase insig. 27 56
  Pseudomonas orientalis W4I3 QF045_RS20750 PAS domain S-box protein insig. 26 56
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1185 sensory box/GGDEF domain/EAL domain protein insig. 26 83
  Pseudomonas sp. BP01 JOY50_RS18065 bifunctional diguanylate cyclase/phosphodiesterase insig. 27 70
  Pseudomonas sp. SVBP6 COO64_RS22585 EAL domain-containing protein insig. 29 58
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3950 Sensory box/GGDEF family protein insig. 27 50
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 25 83
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_60 Sensory box/GGDEF family protein insig. 26 50
  Pseudomonas fluorescens FW300-N2E3 AO353_20610 histidine kinase insig. 26 55
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_17 Sensory box/GGDEF family protein insig. 27 50
  Pseudomonas fluorescens SBW25 PFLU_RS20590 EAL domain-containing protein insig. 25 58
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20590 EAL domain-containing protein insig. 25 58
  Pseudomonas segetis P6 ACVTMO_RS15240 PAS domain S-box protein insig. 27 62
  Pseudomonas putida KT2440 PP_0386 Sensory box protein sig. 27 70
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 27 70
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 26 69
  Pseudomonas fluorescens FW300-N2C3 AO356_21390 histidine kinase insig. 26 50
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 25 83
  Pseudomonas sp. DMC3 GFF52 hypothetical protein insig. 25 70
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03950 hypothetical protein cofit 25 56
  Pseudomonas segetis P6 ACVTMO_RS04275 EAL domain-containing protein insig. 25 57
  Pseudomonas orientalis W4I3 QF045_RS00285 EAL domain-containing protein cofit 24 70
  Pseudomonas sp. RS175 PFR28_02826 hypothetical protein strong 25 50
  Pseudomonas simiae WCS417 PS417_18610 histidine kinase sig. 28 50
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 25 83
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 25 57
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05297 Membrane-bound lytic murein transglycosylase F cofit 24 70
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 26 58
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 27 50
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 27 50
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 26 57
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 26 57
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.94.1 Transcriptional regulator, LuxR family insig. 51 14
  Desulfovibrio vulgaris Hildenborough JW710 DVUA0087 sensory box histidine kinase (TIGR) insig. 32 38
  Pseudomonas simiae WCS417 PS417_18610 histidine kinase sig. 29 29
  Pseudomonas sp. SVBP6 COO64_RS05675 EAL domain-containing protein insig. 30 29
  Pseudomonas putida KT2440 PP_1983 PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase insig. 29 34
  Pseudomonas sp. BP01 JOY50_RS16640 PAS domain S-box protein insig. 29 34
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3500 Sensory box transcriptional regulator, LuxR family insig. 50 13
  Desulfovibrio vulgaris Hildenborough JW710 DVUA0087 sensory box histidine kinase (TIGR) insig. 26 53
  Acidovorax sp. GW101-3H11 Ac3H11_2210 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 28 29
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5581 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) cofit 26 52
  Dechlorosoma suillum PS Dsui_2157 PAS domain S-box insig. 33 28
  Magnetospirillum magneticum AMB-1 AMB_RS17315 PAS domain-containing sensor histidine kinase insig. 25 50
  Pseudomonas sp. RS175 PFR28_02826 hypothetical protein strong 31 30
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 28 30
  Azospirillum brasilense Sp245 AZOBR_RS32350 transcriptional regulator insig. 42 16
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03950 hypothetical protein cofit 27 37
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_60 Sensory box/GGDEF family protein insig. 31 30
  Pseudomonas fluorescens SBW25 PFLU_RS20590 EAL domain-containing protein insig. 27 37
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20590 EAL domain-containing protein insig. 27 37
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_17 Sensory box/GGDEF family protein insig. 27 30
  Ralstonia sp. UNC404CL21Col ABZR87_RS14200 response regulator transcription factor insig. 32 21
  Azospirillum sp. SherDot2 MPMX19_01247 Transcriptional regulatory protein DegU insig. 34 22
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05297 Membrane-bound lytic murein transglycosylase F cofit 28 38
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3950 Sensory box/GGDEF family protein insig. 27 30
  Pseudomonas fluorescens FW300-N2C3 AO356_21390 histidine kinase insig. 27 30
  Rhodanobacter denitrificans MT42 LRK55_RS14195 response regulator transcription factor no data 32 24
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14480 response regulator transcription factor strong 32 24
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS14100 response regulator transcription factor insig. 32 24
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 28 38
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 28 38
  Synechocystis sp000284455 PCC 6803 SGL_RS03320 EAL domain-containing protein insig. 25 38
  Pseudomonas fluorescens FW300-N2E3 AO353_20610 histidine kinase insig. 27 30
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS21335 response regulator transcription factor sig. 32 24
  Rhodanobacter sp. FW510-T8 OKGIIK_03330 citB DNA-binding response regulator insig. 32 24
  Vibrio cholerae E7946 ATCC 55056 CSW01_18885 helix-turn-helix transcriptional regulator insig. 29 20
  Variovorax sp. SCN45 GFF3032 Two-component transcriptional response regulator, LuxR family insig. 42 14
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3241 Transcriptional regulator, LuxR family strong 39 15
  Pseudomonas fluorescens FW300-N2E3 AO353_15025 LuxR family transcriptional regulator insig. 41 17
  Variovorax sp. OAS795 ABID97_RS09120 response regulator transcription factor strong 29 28
  Pseudomonas stutzeri RCH2 Psest_3878 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain sig. 35 22
  Shewanella oneidensis MR-1 SO0864 transcriptional regulator, LuxR family (NCBI ptt file) insig. 26 26
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3859.1 Two-component system regulatory protein sig. 35 23