Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS10755 | | response regulator transcription factor | sig. | 100 | 100 |
o | Ralstonia solanacearum GMI1000 | RS_RS05940 | | DNA-binding response regulator | sig. | 98 | 100 |
o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS15120 | | DNA-binding response regulator | insig. | 98 | 100 |
o | Ralstonia solanacearum UW163 | UW163_RS12590 | | DNA-binding response regulator | insig. | 98 | 100 |
o | Ralstonia solanacearum PSI07 | RPSI07_RS18250 | | DNA-binding response regulator | cofit | 98 | 100 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS22310 | | response regulator transcription factor | strong | 58 | 99 |
| Ralstonia solanacearum PSI07 | RPSI07_RS01370 | | DNA-binding response regulator | strong | 56 | 99 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS21760 | | DNA-binding response regulator | insig. | 55 | 99 |
| Ralstonia solanacearum UW163 | UW163_RS17425 | | DNA-binding response regulator | insig. | 55 | 99 |
| Ralstonia solanacearum GMI1000 | RS_RS18775 | | DNA-binding response regulator | cofit | 56 | 95 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS22670 | | response regulator transcription factor | insig. | 44 | 97 |
| Ralstonia solanacearum GMI1000 | RS_RS18530 | | DNA-binding response regulator | insig. | 40 | 97 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS22010 | | DNA-binding response regulator | insig. | 41 | 97 |
| Ralstonia solanacearum UW163 | UW163_RS22540 | | DNA-binding response regulator | insig. | 41 | 97 |
| Ralstonia solanacearum PSI07 | RPSI07_RS01190 | | DNA-binding response regulator | insig. | 40 | 94 |
o | Cupriavidus basilensis FW507-4G11 | RR42_RS36405 | | LuxR family transcriptional regulator | insig. | 35 | 98 |
o | Azospirillum brasilense Sp245 | AZOBR_RS12455 | | transcriptional regulator | sig. | 33 | 95 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS20875 | | LuxR family transcriptional regulator | insig. | 40 | 59 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS20955 | | LuxR family transcriptional regulator | insig. | 33 | 100 |
| Variovorax sp. OAS795 | ABID97_RS05205 | | response regulator transcription factor | insig. | 35 | 95 |
o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05306 | | two component transcriptional regulator, LuxR family | insig. | 31 | 95 |
o | Paraburkholderia graminis OAS925 | ABIE53_006519 | | DNA-binding NarL/FixJ family response regulator | sig. | 29 | 95 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS26260 | | hypothetical protein | insig. | 30 | 98 |
| Azospirillum sp. SherDot2 | MPMX19_04898 | | Transcriptional regulatory protein LnrK | sig. | 32 | 93 |
o | Paraburkholderia sabiae LMG 24235 | QEN71_RS07810 | | response regulator transcription factor | insig. | 31 | 95 |
| Azospirillum sp. SherDot2 | MPMX19_05115 | | Transcriptional regulatory protein DegU | insig. | 31 | 96 |
| Dinoroseobacter shibae DFL-12 | Dshi_0465 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 29 | 95 |
| Rhodospirillum rubrum S1H | Rru_A2232 | | Two Component Transcriptional Regulator, LuxR family (NCBI) | no data | 30 | 97 |
| Magnetospirillum magneticum AMB-1 | AMB_RS13915 | | DNA-binding response regulator | cofit | 29 | 97 |
| Dechlorosoma suillum PS | Dsui_0382 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 30 | 98 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_13640 | | DNA-binding response regulator | insig. | 29 | 92 |
| Magnetospirillum magneticum AMB-1 | AMB_RS19675 | | DNA-binding response regulator | cofit | 30 | 97 |
| Serratia liquefaciens MT49 | IAI46_19165 | | response regulator transcription factor | insig. | 29 | 92 |
| Variovorax sp. SCN45 | GFF5912 | | Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain | insig. | 40 | 70 |
| Azospirillum brasilense Sp245 | AZOBR_RS20235 | | transcriptional regulator | strong | 30 | 96 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS24080 | | LuxR family transcriptional regulator | no data | 29 | 95 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS19300 | | response regulator transcription factor | insig. | 33 | 96 |
| Pseudomonas simiae WCS417 | PS417_17470 | | LuxR family transcriptional regulator | insig. | 31 | 97 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.5158.1 | | Transcriptional regulator, LuxR family | strong | 30 | 96 |
| Enterobacter sp. TBS_079 | MPMX20_01186 | | Transcriptional activator protein ExaE | strong | 28 | 92 |
o | Castellaniella sp019104865 MT123 | ABCV34_RS10420 | | LuxR C-terminal-related transcriptional regulator | insig. | 27 | 82 |
| Azospirillum sp. SherDot2 | MPMX19_01390 | | Transcriptional regulatory protein LnrK | insig. | 31 | 93 |
| Rhodospirillum rubrum S1H | Rru_A3229 | | Two Component Transcriptional Regulator, LuxR family (NCBI) | insig. | 32 | 97 |
| Marinobacter adhaerens HP15 | HP15_812 | | two component transcriptional regulator, LuxR family | no data | 29 | 95 |
| Azospirillum sp. SherDot2 | MPMX19_01612 | | Transcriptional regulatory protein DegU | insig. | 29 | 95 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_28065 | | LuxR family transcriptional regulator | strong | 30 | 97 |
| Magnetospirillum magneticum AMB-1 | AMB_RS11155 | | DNA-binding response regulator | cofit | 30 | 97 |
| Azospirillum brasilense Sp245 | AZOBR_RS08280 | | regulator | strong | 28 | 97 |
| Bosea sp. OAE506 | ABIE41_RS24085 | | response regulator transcription factor | no data | 29 | 95 |
| Pseudomonas sp. RS175 | PFR28_01811 | | Transcriptional activator protein ExaE | insig. | 30 | 97 |
| Azospirillum brasilense Sp245 | AZOBR_RS10290 | | transcriptional regulator | strong | 29 | 93 |
o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2850 | | Proline sensor-regulator PrlR | no data | 30 | 95 |
| Agrobacterium fabrum C58 | Atu0484 | | two component response regulator | strong | 27 | 92 |
| Acidovorax sp. GW101-3H11 | Ac3H11_716 | | Transcriptional regulator, LuxR family | no data | 27 | 90 |
| Azospirillum sp. SherDot2 | MPMX19_06084 | | Transcriptional regulatory protein LnrK | insig. | 29 | 95 |
| Shewanella amazonensis SB2B | Sama_2076 | | response regulator receiver protein (RefSeq) | strong | 29 | 96 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF107 | | Transcriptional regulator, LuxR family | strong | 30 | 97 |
| Pseudomonas putida KT2440 | PP_2672 | | Transcriptional activator protein ExaE | strong | 29 | 95 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1030.1 | | Transcriptional regulator, LuxR family | no data | 27 | 92 |
| Shewanella sp. ANA-3 | Shewana3_1732 | | two component LuxR family transcriptional regulator (RefSeq) | strong | 29 | 96 |
| Lysobacter sp. OAE881 | ABIE51_RS08520 | | response regulator transcription factor | insig. | 26 | 91 |
| Acinetobacter radioresistens SK82 | MPMX26_02902 | | Transcriptional activator protein ExaE | strong | 25 | 94 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1391 | | DNA-binding response regulator, LuxR family | strong | 29 | 97 |
| Shewanella amazonensis SB2B | Sama_0522 | | response regulator receiver protein (RefSeq) | insig. | 27 | 93 |
| Magnetospirillum magneticum AMB-1 | AMB_RS06370 | | DNA-binding response regulator | cofit | 29 | 92 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS08535 | | response regulator transcription factor | insig. | 28 | 95 |
| Azospirillum sp. SherDot2 | MPMX19_04863 | | Transcriptional regulatory protein LnrK | insig. | 29 | 99 |
| Pseudomonas stutzeri RCH2 | Psest_2864 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 27 | 96 |
| Acidovorax sp. GW101-3H11 | Ac3H11_3000 | | two component transcriptional regulator, LuxR family | insig. | 28 | 98 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_06500 | citB | DNA-binding response regulator | no data | 30 | 93 |
| Variovorax sp. OAS795 | ABID97_RS29195 | | response regulator transcription factor | insig. | 29 | 94 |
| Azospirillum sp. SherDot2 | MPMX19_03200 | | Transcriptional regulatory protein LiaR | insig. | 30 | 91 |
| Shewanella loihica PV-4 | Shew_1545 | | two component LuxR family transcriptional regulator (RefSeq) | no data | 29 | 96 |
| Magnetospirillum magneticum AMB-1 | AMB_RS04685 | | DNA-binding response regulator | insig. | 28 | 95 |
| Shewanella sp. ANA-3 | Shewana3_3459 | | two component LuxR family transcriptional regulator (RefSeq) | cofit | 26 | 93 |
| Pectobacterium carotovorum WPP14 | HER17_RS18230 | | response regulator transcription factor | insig. | 29 | 95 |
| Azospirillum sp. SherDot2 | MPMX19_01792 | | Putative HTH-type transcriptional regulator YhjB | insig. | 35 | 63 |
| Rahnella sp. WP5 | EX31_RS24145 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 27 | 97 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS37190 | | LuxR C-terminal-related transcriptional regulator | insig. | 33 | 89 |
| Pantoea sp. MT58 | IAI47_04245 | | two-component system response regulator NarL | sig. | 28 | 95 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS18195 | | XRE family transcriptional regulator | insig. | 30 | 93 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_4083 | | two component transcriptional regulator, LuxR family | insig. | 27 | 95 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS15195 | | response regulator transcription factor | strong | 28 | 96 |
| Rhizobium sp. OAE497 | ABIE40_RS02405 | | response regulator transcription factor | insig. | 27 | 92 |
| Rhodanobacter denitrificans MT42 | LRK55_RS08190 | | response regulator transcription factor | cofit | 26 | 95 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS08425 | | response regulator transcription factor | strong | 26 | 95 |
| Sinorhizobium meliloti 1021 | SMa1550 | | Response regulator | insig. | 32 | 78 |
| Pectobacterium carotovorum WPP14 | HER17_RS07710 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 27 | 97 |
| Burkholderia phytofirmans PsJN | BPHYT_RS10560 | | hypothetical protein | insig. | 27 | 97 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1129 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 28 | 96 |
| Shewanella oneidensis MR-1 | SO2648 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | strong | 28 | 96 |
| Escherichia fergusonii Becca | EFB2_01663 | | Nitrate/nitrite response regulator protein NarL | insig. | 28 | 98 |
| Escherichia coli Nissle 1917 | ECOLIN_RS12820 | | nitrate/nitrite response regulator protein NarP | no data | 28 | 98 |
| Dinoroseobacter shibae DFL-12 | Dshi_2674 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 27 | 95 |
| Phaeobacter inhibens DSM 17395 | PGA1_c22610 | | putative transcriptional regulator, containing response regulator domain | insig. | 26 | 96 |
| Alteromonas macleodii MIT1002 | MIT1002_01453 | | Protease production enhancer protein | insig. | 30 | 92 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_24485 | | regulator | insig. | 28 | 89 |
| Dickeya dadantii 3937 | DDA3937_RS11950 | | two-component system response regulator NarL | sig. | 27 | 95 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04603 | | two component transcriptional regulator, LuxR family | insig. | 31 | 65 |
| Azospirillum sp. SherDot2 | MPMX19_06012 | | Transcriptional regulatory protein DegU | insig. | 30 | 97 |