Homologs of DVU3309 from Desulfovibrio vulgaris Hildenborough JW710

endo/excinuclease amino terminal domain protein (TIGR)
SEED: COG2827: putative endonuclease containing a URI domain
KEGG: putative endonuclease

89 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU3309 endo/excinuclease amino terminal domain protein (TIGR) sig. 100 100
o Desulfovibrio vulgaris Miyazaki F DvMF_2126 Excinuclease ABC C subunit domain protein (RefSeq) insig. 57 85
  Lysobacter sp. OAE881 ABIE51_RS14940 GIY-YIG nuclease family protein insig. 52 70
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1380.1 COG2827: putative endonuclease containing a URI domain insig. 46 76
  Vibrio cholerae E7946 ATCC 55056 CSW01_17870 GIY-YIG nuclease family protein insig. 47 70
o Escherichia coli ECRC62 BNILDI_01540 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 42 83
o Escherichia coli BW25113 b3155 yhbQ hypothetical protein (NCBI) insig. 42 83
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00545 hypothetical protein insig. 42 83
o Escherichia coli BL21 ECD_03022 GIY-YIG nuclease superfamily protein insig. 42 83
o Escherichia coli ECOR38 HEPCGN_17065 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 42 83
o Escherichia coli ECRC100 OKFHMN_18190 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 42 83
o Escherichia coli ECRC101 MCAODC_08710 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 42 83
o Escherichia coli ECRC102 NIAGMN_15950 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 42 83
o Escherichia coli ECRC98 JDDGAC_21815 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 42 83
o Escherichia coli ECRC99 KEDOAH_09960 yhbQ DNA damage response exodeoxyribonuclease YhbQ no data 42 83
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00190 GIY-YIG nuclease family protein insig. 44 77
o Escherichia coli ECOR27 NOLOHH_09990 yhbQ DNA damage response exodeoxyribonuclease YhbQ insig. 41 83
  Pantoea sp. MT58 IAI47_16950 GIY-YIG nuclease family protein insig. 44 70
  Paraburkholderia sabiae LMG 24235 QEN71_RS24905 GIY-YIG nuclease family protein insig. 43 65
  Dechlorosoma suillum PS Dsui_2028 putative endonuclease containing a URI domain no data 50 60
o Escherichia fergusonii Becca EFB2_00668 hypothetical protein insig. 41 83
o Escherichia coli Nissle 1917 ECOLIN_RS18125 DNA damage response exodeoxyribonuclease YhbQ insig. 41 83
  Pectobacterium carotovorum WPP14 HER17_RS18145 GIY-YIG nuclease family protein cofit 40 74
  Paraburkholderia graminis OAS925 ABIE53_001343 putative endonuclease sig. 41 72
  Dickeya dadantii 3937 DDA3937_RS03130 GIY-YIG nuclease family protein insig. 43 69
  Dickeya dianthicola 67-19 HGI48_RS03305 GIY-YIG nuclease family protein insig. 46 67
  Burkholderia phytofirmans PsJN BPHYT_RS05470 excinuclease ABC subunit C insig. 42 70
  Kangiella aquimarina DSM 16071 B158DRAFT_1379 Predicted endonuclease containing a URI domain insig. 41 65
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS16485 GIY-YIG nuclease family protein insig. 42 74
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00216 putative endonuclease no data 41 66
  Erwinia tracheiphila SCR3 LU632_RS20990 GIY-YIG nuclease family protein insig. 40 73
  Rhodanobacter sp. FW510-T8 OKGIIK_11815 GIY-YIG domain-containing protein insig. 46 75
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14020 UPF0213 protein EJP617_15320 insig. 40 73
  Dickeya dianthicola ME23 DZA65_RS03300 GIY-YIG nuclease family protein insig. 43 69
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS09045 GIY-YIG nuclease family protein cofit 40 73
  Shewanella sp. ANA-3 Shewana3_0136 excinuclease ABC subunit C (RefSeq) insig. 37 72
  Enterobacter sp. TBS_079 MPMX20_04059 hypothetical protein insig. 46 65
  Serratia liquefaciens MT49 IAI46_02030 GIY-YIG nuclease family protein insig. 43 65
  Rhodanobacter denitrificans MT42 LRK55_RS11850 GIY-YIG nuclease family protein insig. 43 69
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12115 GIY-YIG nuclease family protein insig. 43 69
  Pseudomonas syringae pv. syringae B728a Psyr_1080 Excinuclease ABC, C subunit, N-terminal insig. 41 71
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1080 Excinuclease ABC, C subunit, N-terminal insig. 41 71
  Enterobacter asburiae PDN3 EX28DRAFT_3204 Predicted endonuclease containing a URI domain insig. 42 78
  Pseudomonas putida KT2440 PP_0972 UPF0213 protein PP_0972 insig. 40 74
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1513 FIG137864: putative endonuclease containing a URI domain insig. 43 65
o Klebsiella michiganensis M5al BWI76_RS24955 hypothetical protein insig. 39 86
  Pseudomonas sp. BP01 JOY50_RS11230 GIY-YIG nuclease family protein insig. 40 71
  Erwinia amylovora T8 OLJFJH_07290 putative endonuclease GIY-YIG superfamily insig. 41 66
o Pseudomonas simiae WCS417 PS417_04990 GIY-YIG nuclease insig. 39 82
o Shewanella amazonensis SB2B Sama_0145 endonuclease (RefSeq) insig. 36 93
  Shewanella loihica PV-4 Shew_0038 excinuclease ABC subunit C (RefSeq) insig. 38 77
  Rahnella sp. WP5 EX31_RS08465 GIY-YIG nuclease family protein insig. 39 65
  Cupriavidus basilensis FW507-4G11 RR42_RS36170 hypothetical protein insig. 45 78
  Rhodanobacter sp. FW510-T8 OKGIIK_00785 GIY-YIG nuclease family protein insig. 45 59
  Pseudomonas fluorescens SBW25 PFLU_RS05060 GIY-YIG nuclease family protein insig. 41 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05060 GIY-YIG nuclease family protein insig. 41 74
  Sphingobium sp. HT1-2 GFF3898 'tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase (EC 2.1.1.200)' transl_table=11 cofit 38 92
  Pseudomonas stutzeri RCH2 Psest_1218 Predicted endonuclease containing a URI domain insig. 40 71
  Pseudomonas orientalis W4I3 QF045_RS07970 GIY-YIG nuclease family protein insig. 39 79
  Pseudomonas fluorescens FW300-N2C3 AO356_17425 GIY-YIG nuclease insig. 37 76
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01205 hypothetical protein insig. 41 74
  Pseudomonas sp. SVBP6 COO64_RS04380 GIY-YIG nuclease family protein insig. 35 76
  Klebsiella pneumoniae MKP103 KDGMDA_05825 UPF0213 protein KPN78578_35340 insig. 39 76
  Klebsiella pneumoniae MRSN742743 KFA93_RS13020 GIY-YIG nuclease family protein insig. 39 76
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5411 FIG00955494: hypothetical protein insig. 37 74
  Marinobacter adhaerens HP15 HP15_2558 putative nuclease insig. 44 65
  Shewanella oneidensis MR-1 SO0145 hypothetical URI domain endonuclease (NCBI ptt file) insig. 34 71
  Herbaspirillum seropedicae SmR1 HSERO_RS02335 excinuclease ABC subunit C insig. 44 70
  Variovorax sp. OAS795 ABID97_RS06665 GIY-YIG nuclease family protein insig. 38 67
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1705 FIG00955494: hypothetical protein insig. 33 88
  Pseudomonas sp. RS175 PFR28_03536 hypothetical protein insig. 41 60
  Pseudomonas fluorescens FW300-N2E3 AO353_04580 GIY-YIG nuclease insig. 36 71
  Pseudomonas sp. DMC3 GFF1943 hypothetical protein insig. 34 75
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00620 GIY-YIG nuclease family protein insig. 41 59
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_908 FIG00955494: hypothetical protein no data 36 71
  Pseudomonas segetis P6 ACVTMO_RS17530 GIY-YIG nuclease family protein insig. 38 63
  Rhodopseudomonas palustris CGA009 TX73_018790 GIY-YIG nuclease family protein insig. 44 68
  Magnetospirillum magneticum AMB-1 AMB_RS11455 GIY-YIG nuclease family protein cofit 43 61
  Alteromonas macleodii MIT1002 MIT1002_02877 GIY-YIG nuclease superfamily protein insig. 35 71
  Pseudomonas sp. S08-1 OH686_17835 Endo/excinuclease domain protein insig. 53 33
  Acidovorax sp. GW101-3H11 Ac3H11_2277 putative periplasmic protein kinase ArgK and related GTPases of G3E family sig. 38 70
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1064 Predicted endonuclease containing a URI domain insig. 32 74
  Pseudomonas aeruginosa MRSN321 DY961_RS13600 GIY-YIG nuclease family protein insig. 36 61
  Pseudomonas aeruginosa PA14 IKLFDK_19855 UPF0213 protein PA3854 insig. 36 61
  Pseudomonas aeruginosa PUPa3 DQ20_RS48890 GIY-YIG nuclease family protein insig. 36 61
  Fusobacterium nucleatum SB010 HUW76_09640 GIY-YIG nuclease family protein cofit 36 35
  Bosea sp. OAE506 ABIE41_RS17150 GIY-YIG nuclease family protein insig. 36 68
  Caulobacter crescentus NA1000 CCNA_03633 GIY-YIG domain protein insig. 31 80
  Caulobacter crescentus NA1000 Δfur CCNA_03633 GIY-YIG domain protein cofit 31 80