Homologs of DVU0394 from Desulfovibrio vulgaris Hildenborough JW710

radical SAM domain protein (TIGR)
SEED: COG1180: Radical SAM, Pyruvate-formate lyase-activating enzyme like

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU0394 radical SAM domain protein (TIGR) no data 100 100
o Desulfovibrio vulgaris Miyazaki F DvMF_1562 Radical SAM domain protein (RefSeq) no data 50 96
  Fusobacterium nucleatum SB010 HUW76_02255 radical SAM protein cofit 29 80
  Methanococcus maripaludis JJ MMJJ_RS06255 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 strong 27 66
  Methanococcus maripaludis S2 MMP_RS08110 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 no data 28 61
  Fusobacterium nucleatum SB010 HUW76_07285 radical SAM family heme chaperone HemW cofit 25 61
  Bacteroides stercoris CC31F HMPREF1181_RS06440 radical SAM family heme chaperone HemW cofit 26 64
  Phocaeicola dorei CL03T12C01 ABI39_RS00100 radical SAM family heme chaperone HemW cofit 26 63
  Shewanella oneidensis MR-1 SO1326 conserved hypothetical protein (NCBI ptt file) insig. 28 61
  Bacteroides thetaiotaomicron VPI-5482 BT2168 coproporphyrinogen III oxidase (NCBI ptt file) sig. 27 63
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07680 radical SAM family heme chaperone HemW sig. 25 65
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS11035 radical SAM family heme chaperone HemW cofit 26 64
  Methanococcus maripaludis JJ MMJJ_RS06675 TIGR01212 family radical SAM protein strong 25 62
  Pseudomonas syringae pv. syringae B728a Psyr_0471 coproporphyrinogen III oxidase, anaerobic insig. 27 65
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0471 coproporphyrinogen III oxidase, anaerobic insig. 27 65
  Methanococcus maripaludis S2 MMP_RS07685 TIGR01212 family radical SAM protein strong 25 62
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1003 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB sig. 28 63
  Shewanella sp. ANA-3 Shewana3_3048 putative radical SAM protein (RefSeq) insig. 28 61
  Desulfovibrio vulgaris Miyazaki F DvMF_2374 oxygen-independent coproporphyrinogen III oxidase (RefSeq) insig. 31 58
  Serratia liquefaciens MT49 IAI46_22340 TIGR01212 family radical SAM protein insig. 28 57
  Pseudomonas simiae WCS417 PS417_26760 oxidase sig. 28 66
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4593 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB strong 27 63
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2334 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB insig. 27 65
  Bacteroides ovatus ATCC 8483 BACOVA_03177 putative oxygen-independent coproporphyrinogen III oxidase insig. 25 48
  Desulfovibrio vulgaris Miyazaki F DvMF_2819 conserved hypothetical radical SAM protein (RefSeq) insig. 34 40
  Pseudomonas fluorescens FW300-N2E3 AO353_08200 coproporphyrinogen III oxidase strong 27 66
  Rahnella sp. WP5 EX31_RS00615 heme anaerobic degradation radical SAM methyltransferase ChuW/HutW insig. 25 59
  Caulobacter crescentus NA1000 CCNA_01477 oxygen-independent coproporphyrinogen-III oxidase hemN sig. 30 57
  Caulobacter crescentus NA1000 Δfur CCNA_01477 oxygen-independent coproporphyrinogen-III oxidase hemN cofit 30 57
  Shewanella amazonensis SB2B Sama_0858 hypothetical protein (RefSeq) insig. 26 60
  Pseudomonas sp. RS175 PFR28_04249 Heme chaperone HemW insig. 27 61
  Pseudomonas fluorescens FW300-N2C3 AO356_13390 coproporphyrinogen III oxidase sig. 26 61
  Fusobacterium nucleatum SB010 HUW76_03495 B12-binding domain-containing radical SAM protein strong 26 58
  Pseudomonas fluorescens SBW25 PFLU_RS28405 radical SAM family heme chaperone HemW insig. 28 63
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28405 radical SAM family heme chaperone HemW insig. 28 63
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_16765 coproporphyrinogen III oxidase sig. 23 62
  Shewanella loihica PV-4 Shew_1033 putative radical SAM protein (RefSeq) insig. 28 57
  Erwinia tracheiphila SCR3 LU632_RS18435 hutW heme anaerobic degradation radical SAM methyltransferase ChuW/HutW insig. 24 68
  Agrobacterium fabrum C58 Atu1601 oxygen-independent coproporphyrinogen III oxidase strong 25 56
  Klebsiella michiganensis M5al BWI76_RS25305 TIGR01212 family radical SAM protein insig. 26 57
  Ralstonia solanacearum PSI07 RPSI07_RS08635 oxygen-independent coproporphyrinogen III oxidase insig. 27 54
  Lysobacter sp. OAE881 ABIE51_RS17300 radical SAM family heme chaperone HemW insig. 27 58
  Vibrio cholerae E7946 ATCC 55056 CSW01_12015 TIGR01212 family radical SAM protein insig. 23 62
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS08600 oxygen-independent coproporphyrinogen III oxidase insig. 27 54
  Ralstonia solanacearum UW163 UW163_RS05010 oxygen-independent coproporphyrinogen III oxidase insig. 27 54
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0628 putative oxygen-independent coproporphyrinogen III oxidase sig. 24 61
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2955 COG1242: Predicted Fe-S oxidoreductase insig. 24 59
  Rhodanobacter denitrificans MT42 LRK55_RS11460 radical SAM family heme chaperone HemW cofit 27 58
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11735 radical SAM family heme chaperone HemW sig. 27 58
  Rhizobium sp. OAE497 ABIE40_RS01625 radical SAM family heme chaperone HemW no data 26 59
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS18155 coproporphyrinogen III oxidase sig. 25 61
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1224.1 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB strong 27 54
  Ralstonia solanacearum GMI1000 RS_RS16455 oxygen-independent coproporphyrinogen III oxidase insig. 27 54
  Sinorhizobium meliloti 1021 SMc01147 coproporphyrinogen III oxidase strong 26 59
  Dickeya dianthicola 67-19 HGI48_RS01565 TIGR01212 family radical SAM protein insig. 26 57
  Dickeya dianthicola ME23 DZA65_RS01640 TIGR01212 family radical SAM protein insig. 26 57
  Pectobacterium carotovorum WPP14 HER17_RS19905 TIGR01212 family radical SAM protein cofit 23 62
  Desulfovibrio vulgaris Hildenborough JW710 DVU3057 oxygen-independent coproporphyrinogen III oxidase, putative (TIGR) insig. 30 50
  Synechococcus elongatus PCC 7942 Synpcc7942_2382 hemN coproporphyrinogen III oxidase strong 30 55
  Pectobacterium carotovorum WPP14 HER17_RS07230 heme anaerobic degradation radical SAM methyltransferase ChuW/HutW insig. 27 63
  Castellaniella sp019104865 MT123 ABCV34_RS03525 radical SAM family heme chaperone HemW insig. 25 58
  Dickeya dadantii 3937 DDA3937_RS01670 TIGR01212 family radical SAM protein insig. 26 57
  Enterobacter asburiae PDN3 EX28DRAFT_3274 radical SAM protein, TIGR01212 family insig. 25 57
  Alteromonas macleodii MIT1002 MIT1002_00939 Oxygen-independent coproporphyrinogen-III oxidase 1 insig. 24 58
  Phocaeicola dorei CL03T12C01 ABI39_RS10115 TIGR01212 family radical SAM protein insig. 24 62
  Enterobacter sp. TBS_079 MPMX20_04125 hypothetical protein insig. 24 59
  Dickeya dadantii 3937 DDA3937_RS00120 oxygen-independent coproporphyrinogen III oxidase cofit 24 55
  Azospirillum sp. SherDot2 MPMX19_02313 Oxygen-independent coproporphyrinogen III oxidase sig. 25 56
  Castellaniella sp019104865 MT123 ABCV34_RS06465 oxygen-independent coproporphyrinogen III oxidase strong 27 54
  Agrobacterium fabrum C58 Atu0325 oxygen-independent coproporphyrinogen III oxidase no data 26 59
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03545 radical SAM family heme chaperone HemW insig. 22 60
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14495 TIGR01212 family radical SAM protein sig. 24 62
  Pseudomonas stutzeri RCH2 Psest_0276 putative oxygen-independent coproporphyrinogen III oxidase sig. 25 52
  Azospirillum brasilense Sp245 AZOBR_RS03710 coproporphyrinogen III oxidase strong 27 54
  Sinorhizobium meliloti 1021 SMa1266 coproporphyrinogen III oxidase insig. 25 48
  Bacteroides thetaiotaomicron VPI-5482 BT4125 conserved hypothetical protein (NCBI ptt file) sig. 24 62
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS16795 TIGR01212 family radical SAM protein insig. 21 62
  Azospirillum brasilense Sp245 AZOBR_RS02195 coproporphyrinogen III oxidase insig. 24 57
  Dickeya dianthicola ME23 DZA65_RS22220 oxygen-independent coproporphyrinogen III oxidase cofit 24 55
  Desulfovibrio vulgaris Hildenborough JW710 DVU0790 radical SAM protein, TIGR01212 family (TIGR) insig. 25 63
  Shewanella oneidensis MR-1 SO3359 oxygen-independent coproporphyrinogen III oxidase, putative (NCBI ptt file) sig. 26 57
  Escherichia coli ECRC101 MCAODC_06855 chuW Putative oxygen independent coproporphyrinogen III oxidase insig. 24 61
  Escherichia coli ECRC102 NIAGMN_14105 chuW Putative oxygen independent coproporphyrinogen III oxidase insig. 24 61
  Escherichia coli ECRC98 JDDGAC_19970 chuW Putative oxygen independent coproporphyrinogen III oxidase no data 24 61
  Escherichia coli ECRC99 KEDOAH_11805 chuW Putative oxygen independent coproporphyrinogen III oxidase no data 24 61
  Escherichia coli ECRC101 OKFHMN_16340 chuW Putative oxygen independent coproporphyrinogen III oxidase insig. 24 61
  Pseudomonas sp. S08-1 OH686_11020 Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW insig. 24 54
  Escherichia coli Nissle 1917 ECOLIN_RS18470 TIGR01212 family radical SAM protein insig. 24 57
  Marinobacter adhaerens HP15 HP15_2953 oxygen-independent coproporphyrinogen III oxidase insig. 26 57
  Escherichia coli ECOR38 HEPCGN_15240 chuW Putative oxygen independent coproporphyrinogen III oxidase cofit 24 61
  Escherichia fergusonii Becca EFB2_00612 hypothetical protein insig. 24 57
  Escherichia coli ECOR38 HEPCGN_16765 yhcC TIGR01212 family radical SAM protein cofit 24 57
  Bacteroides stercoris CC31F HMPREF1181_RS08775 TIGR01212 family radical SAM protein insig. 24 62
  Escherichia coli ECOR27 NOLOHH_09690 yhcC TIGR01212 family radical SAM protein insig. 24 57
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4143 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) insig. 25 54
  Rhodopseudomonas palustris CGA009 TX73_001700 radical SAM family heme chaperone HemW no data 25 59
  Escherichia coli BL21 ECD_03076 putative Fe-S oxidoreductase, Radical SAM superfamily protein insig. 24 57
  Escherichia coli ECRC101 OKFHMN_17890 yhcC TIGR01212 family radical SAM protein insig. 24 57
  Escherichia coli ECRC101 MCAODC_08410 yhcC TIGR01212 family radical SAM protein insig. 24 57
  Escherichia coli ECRC102 NIAGMN_15650 yhcC TIGR01212 family radical SAM protein insig. 24 57