Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0145 | | response regulator (TIGR) | sig. | 100 | 100 |
o | Desulfovibrio vulgaris Miyazaki F | DvMF_2346 | | response regulator receiver protein (RefSeq) | cofit | 75 | 95 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2334 | | response regulator receiver protein (RefSeq) | insig. | 47 | 87 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1991 | | response regulator receiver protein (RefSeq) | no data | 44 | 92 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0140 | cheYI | response regulator (TIGR) | insig. | 42 | 84 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU2967 | | sensor histidine kinase/response regulator (TIGR) | sig. | 40 | 92 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1988 | | response regulator receiver protein (RefSeq) | sig. | 39 | 83 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1195 | | Sigma-54 dependent response regulator | insig. | 39 | 87 |
| Azospirillum sp. SherDot2 | MPMX19_03494 | | Regulatory protein AtoC | insig. | 39 | 90 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01779 | | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains | insig. | 44 | 81 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1461 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | no data | 43 | 81 |
| Azospirillum sp. SherDot2 | MPMX19_03119 | | Transcriptional regulatory protein QseB | insig. | 38 | 87 |
| Alteromonas macleodii MIT1002 | MIT1002_00810 | | Transcriptional regulatory protein BasR | cofit | 41 | 90 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0271 | | response regulator (TIGR) | insig. | 40 | 89 |
| Paraburkholderia graminis OAS925 | ABIE53_005556 | | two-component system response regulator TctD | insig. | 40 | 87 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU3215 | drrA | response regulator (TIGR) | insig. | 39 | 84 |
| Caulobacter crescentus NA1000 | CCNA_03424 | | AAA-family response regulator tacA | strong | 39 | 83 |
| Caulobacter crescentus NA1000 Δfur | CCNA_03424 | | AAA-family response regulator tacA | cofit | 39 | 83 |
| Azospirillum brasilense Sp245 | AZOBR_RS01060 | | ATPase AAA | insig. | 38 | 87 |
| Bifidobacterium breve UCC2003 | BBR_RS17455 | | DNA-binding response regulator | strong | 34 | 95 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2109 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 40 | 87 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU2963 | | response regulator (TIGR) | strong | 39 | 83 |
| Dechlorosoma suillum PS | Dsui_3286 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 38 | 90 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.5008.1 | | Two-component system regulatory protein | no data | 38 | 87 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0215 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 38 | 91 |
| Pseudomonas putida KT2440 | PP_0133 | | Alginate biosynthesis transcriptional regulatory protein AlgB | sig. | 40 | 86 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_584 | | alginate biosynthesis transcriptional regulatory protein AlgB | sig. | 40 | 86 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1885 | | alginate biosynthesis transcriptional regulatory protein AlgB | sig. | 40 | 86 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_10980 | | chemotaxis protein CheY | insig. | 40 | 86 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_11415 | | chemotaxis protein CheY | strong | 40 | 86 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4152 | | alginate biosynthesis transcriptional regulatory protein AlgB | strong | 40 | 86 |
| Bacteroides thetaiotaomicron VPI-5482 | BT3801 | | rteB, two-component system response regulator (NCBI ptt file) | strong | 36 | 91 |
| Pseudomonas syringae pv. syringae B728a | Psyr_0263 | | Two-component response regulator AlgB | sig. | 38 | 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0263 | | Two-component response regulator AlgB | sig. | 38 | 86 |
| Rhizobium sp. OAE497 | ABIE40_RS19505 | | ActR/PrrA/RegA family redox response regulator transcription factor | cofit | 36 | 79 |
| Pseudomonas sp. RS175 | PFR28_04634 | | Alginate biosynthesis transcriptional regulatory protein AlgB | strong | 40 | 86 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS20435 | | XRE family transcriptional regulator | no data | 39 | 90 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS18360 | | response regulator transcription factor | strong | 38 | 87 |
| Azospirillum brasilense Sp245 | AZOBR_RS18445 | | chemotaxis protein CheY | insig. | 39 | 90 |
| Pseudomonas fluorescens SBW25 | PFLU_RS00440 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 39 | 86 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS00440 | | sigma-54-dependent Fis family transcriptional regulator | strong | 39 | 86 |
| Acidovorax sp. GW101-3H11 | Ac3H11_4464 | | Probable two component response regulator transcription regulator protein | no data | 40 | 87 |
| Pseudomonas simiae WCS417 | PS417_00450 | | chemotaxis protein CheY | strong | 39 | 86 |
| Azospirillum sp. SherDot2 | MPMX19_04701 | | Transcriptional regulatory protein FixJ | insig. | 39 | 90 |
| Lysobacter sp. OAE881 | ABIE51_RS03940 | | response regulator transcription factor | strong | 36 | 87 |
| Burkholderia phytofirmans PsJN | BPHYT_RS20095 | | transcriptional regulator | insig. | 36 | 87 |
| Shewanella sp. ANA-3 | Shewana3_2016 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | insig. | 36 | 87 |
| Azospirillum sp. SherDot2 | MPMX19_02733 | | Regulatory protein LuxO | insig. | 35 | 87 |
| Burkholderia phytofirmans PsJN | BPHYT_RS01790 | | LuxR family transcriptional regulator | strong | 40 | 84 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02602 | | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain | insig. | 38 | 87 |
| Escherichia coli ECOR38 | HEPCGN_22430 | atoC | acetoacetate metabolism transcriptional regulator AtoC | cofit | 38 | 79 |
| Paraburkholderia graminis OAS925 | ABIE53_004452 | | two-component system response regulator TctD | insig. | 36 | 87 |
| Rhodanobacter denitrificans MT42 | LRK55_RS05740 | | response regulator transcription factor | no data | 36 | 87 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05985 | | response regulator transcription factor | cofit | 36 | 87 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1769 | | response regulator receiver protein (RefSeq) | sig. | 36 | 85 |
| Dinoroseobacter shibae DFL-12 | Dshi_0038 | | two component transcriptional regulator, winged helix family (RefSeq) | no data | 43 | 82 |
| Escherichia coli BL21 | ECD_02147 | | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | cofit | 38 | 79 |
| Escherichia fergusonii Becca | EFB2_01635 | | Regulatory protein AtoC | insig. | 38 | 79 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01490 | | Regulatory protein AtoC | insig. | 38 | 79 |
| Escherichia coli Nissle 1917 | ECOLIN_RS12965 | | acetoacetate metabolism transcriptional regulator AtoC | no data | 38 | 79 |
| Escherichia coli BW25113 | b2220 | atoC | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) | insig. | 38 | 79 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2549 | | response regulator receiver sensor signal transduction histidine kinase (RefSeq) | insig. | 37 | 84 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_04380 | | response regulator | strong | 36 | 87 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_00635 | ompR | DNA-binding response regulator | no data | 36 | 87 |
| Rhodopseudomonas palustris CGA009 | TX73_001475 | | response regulator transcription factor | no data | 36 | 82 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4475 | | sensor histidine kinase | insig. | 40 | 83 |
| Pseudomonas stutzeri RCH2 | Psest_4267 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 39 | 88 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS15285 | | response regulator | insig. | 37 | 87 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03801 | | two component transcriptional regulator, winged helix family | insig. | 36 | 87 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0946 | | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | sig. | 35 | 87 |
| Burkholderia phytofirmans PsJN | BPHYT_RS30045 | | ATPase AAA | insig. | 41 | 81 |
| Rhodospirillum rubrum S1H | Rru_A2101 | | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | insig. | 35 | 93 |
| Acidovorax sp. GW101-3H11 | Ac3H11_4210 | | DNA-binding heavy metal response regulator | insig. | 34 | 87 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU3303 | lon | ATP-dependent protease La, truncation (TIGR) | cofit | 39 | 84 |
| Lysobacter sp. OAE881 | ABIE51_RS00905 | | response regulator transcription factor | insig. | 38 | 96 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS02120 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 37 | 85 |
| Alteromonas macleodii MIT1002 | MIT1002_01083 | | Transcriptional regulatory protein ZraR | cofit | 36 | 85 |
| Castellaniella sp019104865 MT123 | ABCV34_RS14210 | | response regulator | no data | 40 | 83 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS02780 | | sigma-54-dependent Fis family transcriptional regulator | strong | 37 | 85 |
| Mycobacterium tuberculosis H37Rv | Rv0981 | | Mycobacterial persistence regulator MRPA (two component response transcriptional regulatory protein) | insig. | 35 | 93 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS30960 | | transcriptional regulator | strong | 38 | 87 |
| Pseudomonas stutzeri RCH2 | Psest_0192 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 44 | 79 |
| Ralstonia solanacearum GMI1000 | RS_RS00390 | | two-component system response regulator | no data | 39 | 84 |
| Phaeobacter inhibens DSM 17395 | PGA1_c33330 | | transcriptional regulatory protein | no data | 41 | 82 |
| Paraburkholderia graminis OAS925 | ABIE53_000448 | | two-component system invasion response regulator UvrY | strong | 37 | 84 |
| Pseudomonas stutzeri RCH2 | Psest_1598 | | heavy metal response regulator | insig. | 33 | 87 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1773 | | response regulator receiver sensor signal transduction histidine kinase (RefSeq) | insig. | 39 | 91 |
| Pseudomonas sp. S08-1 | OH686_12145 | | Alginate biosynthesis two-component system response regulator AlgB | cofit | 38 | 86 |
| Pantoea sp. MT58 | IAI47_00340 | | response regulator | insig. | 35 | 87 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS02475 | | response regulator | cofit | 38 | 87 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02179 | | two component transcriptional regulator, LuxR family | cofit | 37 | 84 |
| Acinetobacter radioresistens SK82 | MPMX26_02240 | | Transcriptional regulatory protein KdpE | no data | 35 | 93 |
| Fusobacterium nucleatum SB010 | HUW76_03950 | | response regulator transcription factor | strong | 35 | 82 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_10660 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 33 | 85 |
| Shewanella loihica PV-4 | Shew_1396 | | response regulator receiver protein (RefSeq) | insig. | 40 | 74 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_05195 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 39 | 61 |
| Dechlorosoma suillum PS | Dsui_1758 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 37 | 81 |
| Escherichia coli ECOR27 | NOLOHH_10660 | | Transcriptional regulatory protein QseB | cofit | 37 | 87 |
| Escherichia coli ECRC101 | OKFHMN_18880 | | Transcriptional regulatory protein QseB | insig. | 37 | 87 |
| Escherichia coli ECRC101 | MCAODC_09395 | | Transcriptional regulatory protein QseB | insig. | 37 | 87 |