Homologs of Rru_A1220 from Rhodospirillum rubrum S1H

Phage integrase (NCBI)
SEED: Site-specific tyrosine recombinase
KEGG: integrase/recombinase XerC

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodospirillum rubrum S1H Rru_A1220 Phage integrase (NCBI) no data 100 100
o Magnetospirillum magneticum AMB-1 AMB_RS21485 tyrosine recombinase XerC no data 63 93
o Azospirillum sp. SherDot2 MPMX19_02110 Tyrosine recombinase XerC no data 53 94
o Azospirillum brasilense Sp245 AZOBR_RS03965 tyrosine recombinase XerC no data 54 94
o Rhizobium sp. OAE497 ABIE40_RS17950 tyrosine recombinase XerC insig. 54 89
o Agrobacterium fabrum C58 Atu2628 site-specific recombinase no data 50 91
o Sinorhizobium meliloti 1021 SMc02489 site-specific tyrosine recombinase XerC no data 50 88
o Rhodopseudomonas palustris CGA009 TX73_000945 tyrosine recombinase XerC sig. 49 94
o Bosea sp. OAE506 ABIE41_RS07870 tyrosine recombinase XerC strong 49 89
o Xanthobacter sp. DMC5 GFF2054 Tyrosine recombinase XerC no data 49 89
o Caulobacter crescentus NA1000 CCNA_00349 integrase/recombinase, XerC-CodV family strong 48 90
o Caulobacter crescentus NA1000 Δfur CCNA_00349 integrase/recombinase, XerC-CodV family cofit 48 90
o Dinoroseobacter shibae DFL-12 Dshi_5002 xerC hypothetical protein (NCBI) no data 48 92
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12210 tyrosine recombinase XerC insig. 48 92
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2764 Site-specific recombinase XerD sig. 47 87
o Phaeobacter inhibens DSM 17395 PGA1_c05760 putative tyrosine recombinase XerC strong 45 90
o Sphingobium sp. HT1-2 GFF251 Site-specific tyrosine recombinase XerC cofit 44 88
o Dechlorosoma suillum PS Dsui_0651 tyrosine recombinase XerC insig. 40 89
o Pantoea sp. MT58 IAI47_18400 tyrosine recombinase XerC sig. 41 92
o Pseudomonas aeruginosa PUPa3 DQ20_RS49840 xerC;go_function=site-specific tyrosine recombinase XerC strong 40 91
  Lysobacter sp. OAE881 ABIE51_RS03035 tyrosine recombinase XerC strong 42 89
o Pseudomonas aeruginosa PA14 IKLFDK_27050 tyrosine recombinase XerC strong 40 91
o Ralstonia solanacearum PSI07 RPSI07_RS23690 tyrosine recombinase XerC insig. 40 90
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15025 tyrosine recombinase XerC strong 41 91
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS15380 tyrosine recombinase XerC no data 39 92
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS02315 tyrosine recombinase XerC insig. 42 89
o Pseudomonas aeruginosa MRSN321 DY961_RS12285 xerC;go_function=site-specific tyrosine recombinase XerC strong 40 91
o Rhodanobacter sp. FW510-T8 OKGIIK_15325 xerC tyrosine recombinase XerC insig. 40 89
  Methylophilus sp. DMC18 GFF1535 Tyrosine recombinase XerC insig. 39 89
o Rahnella sp. WP5 EX31_RS15165 tyrosine recombinase XerC strong 39 92
o Escherichia coli BL21 ECD_03687 site-specific tyrosine recombinase sig. 38 92
o Pseudomonas sp. SVBP6 COO64_RS01270 xerC tyrosine recombinase XerC sig. 38 90
o Escherichia coli ECRC100 OKFHMN_14420 xerC tyrosine recombinase XerC insig. 38 92
o Escherichia coli ECRC101 MCAODC_04925 xerC tyrosine recombinase XerC no data 38 92
o Escherichia coli ECRC102 NIAGMN_12175 xerC tyrosine recombinase XerC no data 38 92
o Escherichia coli ECRC98 JDDGAC_18045 xerC tyrosine recombinase XerC no data 38 92
o Escherichia coli ECRC99 KEDOAH_13730 xerC tyrosine recombinase XerC no data 38 92
o Rhodanobacter denitrificans MT42 LRK55_RS08300 tyrosine recombinase XerC strong 41 89
o Serratia liquefaciens MT49 IAI46_00725 tyrosine recombinase XerC insig. 38 92
o Escherichia fergusonii Becca EFB2_04826 Tyrosine recombinase XerC strong 38 92
o Pseudomonas syringae pv. syringae B728a Psyr_0185 tyrosine recombinase XerC subunit sig. 37 90
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0185 tyrosine recombinase XerC subunit sig. 37 90
o Escherichia coli ECOR27 NOLOHH_06550 xerC tyrosine recombinase XerC insig. 38 92
o Escherichia coli ECOR38 HEPCGN_13125 xerC tyrosine recombinase XerC cofit 38 92
o Escherichia coli ECRC62 BNILDI_04985 xerC tyrosine recombinase XerC insig. 38 92
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04239 Tyrosine recombinase XerC insig. 38 92
o Escherichia coli Nissle 1917 ECOLIN_RS21875 tyrosine recombinase XerC strong 38 92
o Escherichia coli BW25113 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) strong 38 92
o Pseudomonas sp. DMC3 GFF370 Tyrosine recombinase XerC cofit 38 90
o Alteromonas macleodii MIT1002 MIT1002_00157 Tyrosine recombinase XerC insig. 38 88
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_08780 xerC tyrosine recombinase XerC no data 38 93
o Erwinia tracheiphila SCR3 LU632_RS24135 xerC tyrosine recombinase XerC no data 38 93
o Pseudomonas sp. S08-1 OH686_13785 tyrosine recombinase XerC insig. 37 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4416 Tyrosine recombinase XerC strong 37 90
o Pectobacterium carotovorum WPP14 HER17_RS01350 tyrosine recombinase XerC strong 36 97
o Pseudomonas sp. BP01 JOY50_RS22610 xerC tyrosine recombinase XerC insig. 36 91
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS08535 tyrosine recombinase XerC insig. 42 89
o Klebsiella michiganensis M5al BWI76_RS01210 tyrosine recombinase XerC strong 40 92
o Enterobacter asburiae PDN3 EX28DRAFT_4480 tyrosine recombinase XerC no data 39 89
  Alteromonas macleodii MIT1002 MIT1002_00786 Tyrosine recombinase XerD insig. 36 92
o Pseudomonas fluorescens FW300-N2C3 AO356_12725 recombinase XerC strong 38 90
o Pseudomonas fluorescens FW300-N2E3 AO353_09050 recombinase XerC sig. 37 90
  Pseudomonas segetis P6 ACVTMO_RS22525 xerC tyrosine recombinase XerC no data 37 91
o Burkholderia phytofirmans PsJN BPHYT_RS01655 tyrosine recombinase XerC no data 38 90
o Pseudomonas sp. RS175 PFR28_04378 Tyrosine recombinase XerC strong 38 90
o Pseudomonas stutzeri RCH2 Psest_3767 tyrosine recombinase XerC strong 37 91
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09675 tyrosine recombinase XerC sig. 39 90
o Ralstonia solanacearum UW163 UW163_RS03905 tyrosine recombinase XerC insig. 39 90
o Castellaniella sp019104865 MT123 ABCV34_RS13455 tyrosine recombinase XerC sig. 39 90
o Ralstonia sp. UNC404CL21Col ABZR87_RS05065 tyrosine recombinase XerC strong 37 90
o Dickeya dadantii 3937 DDA3937_RS19890 tyrosine recombinase XerC no data 39 89
o Shewanella amazonensis SB2B Sama_3247 integrase/recombinase XerC (RefSeq) strong 40 80
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF547 Tyrosine recombinase XerC sig. 38 89
o Paraburkholderia graminis OAS925 ABIE53_000426 integrase/recombinase XerC no data 38 90
o Pseudomonas fluorescens GW456-L13 PfGW456L13_842 Tyrosine recombinase XerC sig. 37 90
o Pseudomonas putida KT2440 PP_5230 Tyrosine recombinase XerC strong 36 91
o Ralstonia solanacearum GMI1000 RS_RS00260 Tyrosine recombinase XerC 1 insig. 40 90
  Marinobacter adhaerens HP15 HP15_250 site-specific tyrosine recombinase XerC strong 39 90
  Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 38 84
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2171 Tyrosine recombinase XerC insig. 38 90
  Shewanella loihica PV-4 Shew_0770 tyrosine recombinase XerD (RefSeq) strong 40 85
o Dickeya dianthicola ME23 DZA65_RS21090 tyrosine recombinase XerC insig. 39 89
o Klebsiella pneumoniae MKP103 KDGMDA_09700 tyrosine recombinase XerC strong 40 87
  Pseudomonas segetis P6 ACVTMO_RS07795 xerD site-specific tyrosine recombinase XerD strong 39 90
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.847.1 Site-specific tyrosine recombinase no data 39 89
o Herbaspirillum seropedicae SmR1 HSERO_RS21475 recombinase XerC insig. 37 89
  Rahnella sp. WP5 EX31_RS13480 site-specific tyrosine recombinase XerD strong 36 96
  Escherichia coli BL21 ECD_02726 site-specific tyrosine recombinase strong 40 88
  Escherichia fergusonii Becca EFB2_01007 Tyrosine recombinase XerD strong 40 88
  Escherichia coli ECRC102 NIAGMN_17335 xerD site-specific tyrosine recombinase XerD no data 40 88
  Escherichia coli Nissle 1917 ECOLIN_RS16125 site-specific tyrosine recombinase XerD strong 40 88
  Escherichia coli BW25113 b2894 xerD site-specific tyrosine recombinase XerD (NCBI) strong 40 88
  Escherichia coli ECOR38 HEPCGN_18860 xerD site-specific tyrosine recombinase XerD strong 39 88
  Escherichia coli ECOR27 NOLOHH_11495 xerD site-specific tyrosine recombinase XerD insig. 40 88
  Escherichia coli ECRC100 OKFHMN_19570 xerD site-specific tyrosine recombinase XerD no data 40 88
  Escherichia coli ECRC101 MCAODC_10090 xerD site-specific tyrosine recombinase XerD no data 40 88
  Escherichia coli ECRC62 BNILDI_10025 xerD site-specific tyrosine recombinase XerD insig. 40 88
  Escherichia coli ECRC98 JDDGAC_23210 xerD site-specific tyrosine recombinase XerD no data 40 88
  Escherichia coli ECRC99 KEDOAH_08570 xerD site-specific tyrosine recombinase XerD no data 40 88
o Dickeya dianthicola 67-19 HGI48_RS20045 tyrosine recombinase XerC strong 39 89