| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Xanthomonas campestris pv. campestris strain 8004 | 1.0 | Xcc-8004.4046.1 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 1.0 | Xcc-8004.2451.1 | | Multiple sugar ABC transporter, ATP-binding protein | 0.59 | 8 |
| Lysobacter sp. OAE881 | 0.82 | ABIE51_RS14145 | | endopeptidase La | 0.62 | ABIE51_RS08870 | | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.74 | ABZR86_RS07320 | | endopeptidase La | 0.60 | ABZR86_RS13045 | | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.73 | OKGIIK_08030 | lon | endopeptidase La | 0.63 | OKGIIK_15455 | malK | ABC-type sugar transport system, ATPase component MalK | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.73 | LRK54_RS16735 | | endopeptidase La | 0.63 | LRK54_RS08690 | | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.73 | LRK55_RS16460 | | endopeptidase La | 0.64 | LRK55_RS08455 | | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | low | > 63 |
| Pseudomonas stutzeri RCH2 | 0.65 | Psest_2285 | | ATP-dependent protease La | 0.44 | Psest_1899 | | ABC-type sugar transport systems, ATPase components | low | > 67 |
| Pseudomonas fluorescens FW300-N2C3 | 0.65 | AO356_01740 | | DNA-binding protein | 0.45 | AO356_27685 | | ABC transporter ATP-binding protein | low | > 104 |
| Ralstonia solanacearum GMI1000 | 0.65 | RS_RS08655 | | endopeptidase La | 0.47 | RS_RS06350 | | sn-glycerol-3-phosphate import ATP-binding protein UgpC | — | — |
| Ralstonia solanacearum PSI07 | 0.65 | RPSI07_RS16135 | | endopeptidase La | 0.47 | RPSI07_RS17785 | | sn-glycerol-3-phosphate import ATP-binding protein UgpC | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.65 | Pf6N2E2_2216 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.45 | Pf6N2E2_807 | | Various polyols ABC transporter, ATP-binding component | — | — |
| Ralstonia solanacearum UW163 | 0.65 | UW163_RS14650 | | endopeptidase La | 0.47 | UW163_RS13030 | | sn-glycerol-3-phosphate import ATP-binding protein UgpC | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.65 | RALBFv3_RS01340 | | endopeptidase La | 0.47 | RALBFv3_RS15570 | | sn-glycerol-3-phosphate import ATP-binding protein UgpC | — | — |
| Ralstonia sp. UNC404CL21Col | 0.64 | ABZR87_RS12785 | | endopeptidase La | 0.48 | ABZR87_RS11100 | | sn-glycerol-3-phosphate import ATP-binding protein UgpC | low | > 80 |
| Pseudomonas fluorescens FW300-N1B4 | 0.64 | Pf1N1B4_3947 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.45 | Pf1N1B4_4847 | | Various polyols ABC transporter, ATP-binding component | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.64 | AO353_20185 | | DNA-binding protein | 0.45 | AO353_03380 | | sugar ABC transporter ATP-binding protein | low | > 101 |
| Dickeya dadantii 3937 | 0.64 | DDA3937_RS05650 | | endopeptidase La | 0.49 | DDA3937_RS00735 | | sn-glycerol-3-phosphate import ATP-binding protein UgpC | low | > 74 |
| Pseudomonas fluorescens GW456-L13 | 0.64 | PfGW456L13_2554 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.45 | PfGW456L13_3039 | | Various polyols ABC transporter, ATP-binding component | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.64 | PFLU_RS19160 | | endopeptidase La | 0.44 | PFLU_RS13390 | | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | low | > 109 |
| Pseudomonas sp. RS175 | 0.64 | PFR28_01230 | | Lon protease | 0.46 | PFR28_01710 | | Maltose/maltodextrin import ATP-binding protein MalK | low | > 88 |
| Klebsiella michiganensis M5al | 0.64 | BWI76_RS06535 | | endopeptidase La | 0.49 | BWI76_RS26290 | | glycerol-3-phosphate ABC transporter ATP-binding protein | low | > 92 |
| Pseudomonas fluorescens SBW25 | 0.64 | PFLU_RS19160 | | endopeptidase La | 0.44 | PFLU_RS13390 | | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | low | > 109 |
| Pseudomonas simiae WCS417 | 0.64 | PS417_17225 | | DNA-binding protein | 0.45 | PS417_12700 | | ABC transporter for D-Mannitol and D-Sorbitol, ATPase component (from data) | — | — |
| Dickeya dianthicola 67-19 | 0.64 | HGI48_RS05695 | | endopeptidase La | 0.49 | HGI48_RS20635 | | sn-glycerol-3-phosphate import ATP-binding protein UgpC | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.64 | HER17_RS15840 | | endopeptidase La | 0.48 | HER17_RS00625 | | sn-glycerol-3-phosphate import ATP-binding protein UgpC | — | — |
| Dickeya dianthicola ME23 | 0.64 | DZA65_RS06020 | | endopeptidase La | 0.49 | DZA65_RS21650 | | sn-glycerol-3-phosphate import ATP-binding protein UgpC | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.64 | CSW01_09605 | | endopeptidase La | 0.43 | CSW01_18860 | | maltose/maltodextrin import ATP-binding protein MalK | low | > 62 |
| Pseudomonas syringae pv. syringae B728a | 0.64 | Psyr_1749 | | ATP-dependent proteinase, Serine peptidase, MEROPS family S16 | 0.44 | Psyr_2437 | | mannitol ABC transporter ATP-binding protein / sorbitol ABC transporter ATP-binding protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.64 | Psyr_1749 | | ATP-dependent proteinase, Serine peptidase, MEROPS family S16 | 0.44 | Psyr_2437 | | mannitol ABC transporter ATP-binding protein / sorbitol ABC transporter ATP-binding protein | low | > 86 |
| Pantoea sp. MT58 | 0.64 | IAI47_14645 | | endopeptidase La | 0.49 | IAI47_01605 | | sn-glycerol-3-phosphate import ATP-binding protein UgpC | — | — |
| Pseudomonas sp. S08-1 | 0.64 | OH686_03635 | | endopeptidase La | 0.44 | OH686_02455 | | Glucose ABC transporter, ATP-binding subunit | low | > 80 |
| Herbaspirillum seropedicae SmR1 | 0.64 | HSERO_RS12905 | | peptidase | 0.49 | HSERO_RS18940 | | sn-glycerol-3-phosphate ABC transporter ATP-binding protein | — | — |
| Enterobacter sp. TBS_079 | 0.64 | MPMX20_01030 | | Lon protease | 0.48 | MPMX20_04326 | | sn-glycerol-3-phosphate import ATP-binding protein UgpC | low | > 85 |
| Erwinia tracheiphila SCR3 | 0.64 | LU632_RS18335 | lon | endopeptidase La | 0.43 | LU632_RS00805 | ugpC | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | — | — |
| Serratia liquefaciens MT49 | 0.64 | IAI46_05020 | | endopeptidase La | 0.50 | IAI46_01005 | | sn-glycerol-3-phosphate import ATP-binding protein UgpC | low | > 86 |
| Escherichia coli BL21 | 0.64 | ECD_00391 | | DNA-binding ATP-dependent protease La | 0.49 | ECD_01295 | | putative sugar transport protein | — | — |
| Enterobacter asburiae PDN3 | 0.64 | EX28DRAFT_2531 | | endopeptidase La | 0.48 | EX28DRAFT_0989 | | ABC-type sugar transport systems, ATPase components | low | > 76 |
| Escherichia coli ECOR27 | 0.64 | NOLOHH_01255 | lon_P403L | Lon protease | 0.49 | NOLOHH_20025 | ycjV | Uncharacterized ABC transporter ATP-binding protein YcjV | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.64 | OHPLBJKB_03234 | | Lon protease | 0.49 | OHPLBJKB_02364 | | sn-glycerol-3-phosphate import ATP-binding protein UgpC | low | > 73 |
| Escherichia fergusonii Becca | 0.64 | EFB2_03618 | | Lon protease | 0.49 | EFB2_02609 | | Oligosaccharides import ATP-binding protein MsmX | low | > 86 |
| Escherichia coli Nissle 1917 | 0.64 | ECOLIN_RS02635 | | endopeptidase La | 0.49 | ECOLIN_RS07920 | | ABC transporter ATP-binding protein | — | — |
| Escherichia coli BW25113 | 0.64 | b0439 | lon | DNA-binding ATP-dependent protease La (NCBI) | 0.49 | b3450 | ugpC | ATP-binding component of sn-glycerol 3-phosphate transport system (VIMSS) | low | > 76 |
| Escherichia coli ECRC62 | 0.64 | BNILDI_22670 | lon_P403L | Lon protease | 0.49 | BNILDI_18175 | ycjV | Uncharacterized ABC transporter ATP-binding protein YcjV | low | > 75 |
| Escherichia coli ECOR38 | 0.64 | HEPCGN_06935 | lon_P403L | Lon protease | 0.50 | HEPCGN_25860 | ycjV | Uncharacterized ABC transporter ATP-binding protein YcjV | low | > 87 |
| Pseudomonas putida KT2440 | 0.64 | PP_2302 | | DNA-binding, ATP-dependent protease | 0.43 | PP_1018 | | mannose/glucose ABC transporter - ATP binding subunit | low | > 96 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.64 | GFF4355 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.47 | GFF558 | | Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3) | low | > 78 |
| Escherichia coli ECRC100 | 0.63 | OKFHMN_08320 | | Lon protease | 0.49 | OKFHMN_02330 | ycjV | Uncharacterized ABC transporter ATP-binding protein YcjV | low | > 80 |
| Escherichia coli ECRC99 | 0.63 | KEDOAH_19645 | | Lon protease | 0.49 | KEDOAH_26445 | ycjV | Uncharacterized ABC transporter ATP-binding protein YcjV | — | — |
| Escherichia coli ECRC102 | 0.63 | NIAGMN_06375 | | Lon protease | 0.49 | NIAGMN_26500 | ycjV | Uncharacterized ABC transporter ATP-binding protein YcjV | — | — |
| Escherichia coli ECRC98 | 0.63 | JDDGAC_11975 | | Lon protease | 0.49 | JDDGAC_04875 | ycjV | Uncharacterized ABC transporter ATP-binding protein YcjV | low | > 86 |
| Escherichia coli ECRC101 | 0.63 | MCAODC_27545 | | Lon protease | 0.49 | MCAODC_15940 | ycjV | Uncharacterized ABC transporter ATP-binding protein YcjV | low | > 87 |
| Marinobacter adhaerens HP15 | 0.63 | HP15_2183 | | DNA-binding ATP-dependent protease La | 0.44 | HP15_2955 | | ATP-binding component of ABC transporter | low | > 73 |
| Rahnella sp. WP5 | 0.63 | EX31_RS22255 | | endopeptidase La | 0.50 | EX31_RS14745 | | sn-glycerol-3-phosphate import ATP-binding protein UgpC | low | > 89 |
| Paraburkholderia sabiae LMG 24235 | 0.63 | QEN71_RS21975 | | endopeptidase La | 0.48 | QEN71_RS15885 | | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.63 | BPHYT_RS09460 | | peptidase | 0.49 | BPHYT_RS17470 | | glycerol-3-phosphate ABC transporter ATP-binding protein | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.63 | RR42_RS09030 | | DNA-binding protein | 0.48 | RR42_RS12955 | | glycerol-3-phosphate ABC transporter ATP-binding protein | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.63 | H281DRAFT_00898 | | ATP-dependent proteinase. Serine peptidase. MEROPS family S16 | 0.50 | H281DRAFT_05701 | | glycerol 3-phosphate ABC transporter ATP-binding protein | — | — |
| Azospirillum brasilense Sp245 | 0.62 | AZOBR_RS07145 | | peptidase | 0.46 | AZOBR_RS00060 | | sn-glycerol-3-phosphate ABC transporter ATP-binding protein | low | > 97 |
| Azospirillum sp. SherDot2 | 0.62 | MPMX19_01545 | | Lon protease | 0.47 | MPMX19_00486 | | sn-glycerol-3-phosphate import ATP-binding protein UgpC | low | > 112 |
| Acidovorax sp. GW101-3H11 | 0.62 | Ac3H11_937 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.43 | Ac3H11_4785 | | Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC (TC 3.A.1.1.3) | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.61 | GFF4044 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.44 | GFF4371 | | ABC transporter related | low | > 90 |
| Variovorax sp. OAS795 | 0.61 | ABID97_RS17590 | | endopeptidase La | 0.48 | ABID97_RS21180 | | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | low | > 91 |
| Castellaniella sp019104865 MT123 | 0.61 | ABCV34_RS05125 | | endopeptidase La | 0.46 | ABCV34_RS03590 | | sn-glycerol-3-phosphate import ATP-binding protein UgpC | — | — |
| Paraburkholderia graminis OAS925 | 0.61 | ABIE53_002117 | | ATP-dependent Lon protease | 0.49 | ABIE53_003654 | | sn-glycerol 3-phosphate transport system ATP-binding protein | low | > 113 |
| Rhodospirillum rubrum S1H | 0.61 | Rru_A1552 | | Peptidase S16, ATP-dependent protease La (NCBI) | 0.46 | Rru_A1260 | | ABC transporter component (NCBI) | low | > 58 |
| Variovorax sp. SCN45 | 0.60 | GFF487 | | ATP-dependent protease La (EC 3.4.21.53) Type I | 0.47 | GFF6777 | | ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) | low | > 127 |
| Agrobacterium fabrum C58 | 0.59 | Atu1261 | | ATP-dependent protease LA | 0.49 | Atu4249 | | sugars ABC transporter ATPase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.59 | TX73_015345 | | endopeptidase La | 0.49 | TX73_017965 | | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | — | — |
| Sinorhizobium meliloti 1021 | 0.58 | SMc01905 | | ATP-dependent protease LA protein | 0.50 | SM_b20661 | | sugar uptake ABC transporter ATP-binding protein | — | — |
| Rhizobium sp. OAE497 | 0.58 | ABIE40_RS07100 | | endopeptidase La | 0.48 | ABIE40_RS21865 | | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | — | — |
| Bosea sp. OAE506 | 0.58 | ABIE41_RS18050 | | endopeptidase La | 0.51 | ABIE41_RS06415 | | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | — | — |
| Phaeobacter inhibens DSM 17395 | 0.57 | PGA1_c20540 | | ATP-dependent protease La | 0.47 | PGA1_c02740 | | sn-glycerol-3-phosphate import ATP-binding protein UgbC | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.57 | A4249_RS06460 | | endopeptidase La | 0.45 | A4249_RS03635 | | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | — | — |
| Dinoroseobacter shibae DFL-12 | 0.56 | Dshi_1777 | | ATP-dependent protease La (RefSeq) | 0.45 | Dshi_1250 | | ABC transporter related (RefSeq) | low | > 64 |
| Desulfovibrio vulgaris Miyazaki F | 0.53 | DvMF_0112 | | ATP-dependent protease La (RefSeq) | 0.39 | DvMF_0655 | | ABC transporter related (RefSeq) | low | > 51 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.52 | DVU1337 | lon | ATP-dependent protease La (TIGR) | 0.39 | DVU3161 | | ABC transporter, ATP-binding protein (TIGR) | low | > 55 |
| Fusobacterium nucleatum SB010 | 0.41 | HUW76_01065 | | endopeptidase La | 0.34 | HUW76_02670 | | ABC transporter ATP-binding protein | low | > 35 |
Not shown: 21 genomes with orthologs for Xcc-8004.4046.1 only; 3 genomes with orthologs for Xcc-8004.2451.1 only