| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Xanthomonas campestris pv. campestris strain 8004 | 1.0 | Xcc-8004.3118.1 | | C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS | 1.0 | Xcc-8004.1711.1 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | 0.57 | 20 |
| Lysobacter sp. OAE881 | 0.79 | ABIE51_RS07790 | | CinA family protein | 0.58 | ABIE51_RS16060 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.68 | ABZR86_RS00655 | | CinA family protein | 0.25 | ABZR86_RS09305 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.67 | LRK54_RS14975 | | CinA family protein | 0.26 | LRK54_RS02905 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.67 | LRK55_RS14690 | | CinA family protein | 0.26 | LRK55_RS02655 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.66 | OKGIIK_03735 | pncC | damage-inducible protein CinA | 0.25 | OKGIIK_09885 | | Pyridoxal phosphate homeostasis protein | low | > 52 |
| Dickeya dadantii 3937 | 0.54 | DDA3937_RS16250 | | nicotinamide-nucleotide amidase | 0.43 | DDA3937_RS17300 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 74 |
| Dickeya dianthicola 67-19 | 0.54 | HGI48_RS16360 | | nicotinamide-nucleotide amidase | 0.43 | HGI48_RS17345 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 71 |
| Dickeya dianthicola ME23 | 0.53 | DZA65_RS17455 | | nicotinamide-nucleotide amidase | 0.43 | DZA65_RS18435 | | YggS family pyridoxal phosphate-dependent enzyme | 0.53 | 23 |
| Escherichia coli ECOR27 | 0.52 | NOLOHH_12540 | pncC | nicotinamide-nucleotide amidase | 0.46 | NOLOHH_11125 | yggS | pyridoxal phosphate homeostasis protein | low | > 75 |
| Escherichia coli BL21 | 0.52 | ECD_02550 | | nicotinamide-nucleotide amidohydrolase; NMN amidohydrolase | 0.46 | ECD_02781 | | UPF0001 family protein, PLP-binding | low | > 61 |
| Escherichia coli ECRC62 | 0.52 | BNILDI_11100 | pncC | nicotinamide-nucleotide amidase | 0.46 | BNILDI_09705 | yggS | pyridoxal phosphate homeostasis protein | low | > 75 |
| Escherichia coli Nissle 1917 | 0.52 | ECOLIN_RS15065 | | nicotinamide-nucleotide amidase | 0.46 | ECOLIN_RS16415 | | pyridoxal phosphate homeostasis protein | low | > 55 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.52 | OHPLBJKB_01034 | | Nicotinamide-nucleotide amidohydrolase PncC | 0.46 | OHPLBJKB_00765 | | Pyridoxal phosphate homeostasis protein | low | > 73 |
| Marinobacter adhaerens HP15 | 0.52 | HP15_1046 | | competence damage-inducible protein A | 0.39 | HP15_288 | | alanine racemase domain protein | low | > 73 |
| Escherichia coli BW25113 | 0.52 | b2700 | ygaD | competence damage-inducible protein A (NCBI) | 0.46 | b2951 | yggS | predicted enzyme (NCBI) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.52 | MPMX20_03581 | | Nicotinamide-nucleotide amidohydrolase PncC | 0.42 | MPMX20_03809 | | Pyridoxal phosphate homeostasis protein | low | > 85 |
| Escherichia coli ECRC101 | 0.52 | MCAODC_11225 | pncC | nicotinamide-nucleotide amidase | 0.46 | MCAODC_09775 | yggS | pyridoxal phosphate homeostasis protein | low | > 87 |
| Escherichia coli ECOR38 | 0.52 | HEPCGN_19895 | pncC | nicotinamide-nucleotide amidase | 0.46 | HEPCGN_18560 | yggS | pyridoxal phosphate homeostasis protein | low | > 87 |
| Escherichia coli ECRC98 | 0.52 | JDDGAC_24365 | pncC | nicotinamide-nucleotide amidase | 0.46 | JDDGAC_22885 | yggS | pyridoxal phosphate homeostasis protein | low | > 86 |
| Enterobacter asburiae PDN3 | 0.52 | EX28DRAFT_2786 | | amidohydrolase, PncC family | 0.43 | EX28DRAFT_2989 | | pyridoxal phosphate enzyme, YggS family | 0.38 | 62 |
| Escherichia coli ECRC99 | 0.52 | KEDOAH_07435 | pncC | nicotinamide-nucleotide amidase | 0.46 | KEDOAH_08885 | yggS | pyridoxal phosphate homeostasis protein | — | — |
| Escherichia fergusonii Becca | 0.52 | EFB2_01224 | | Nicotinamide-nucleotide amidohydrolase PncC | 0.46 | EFB2_00951 | | Pyridoxal phosphate homeostasis protein | low | > 86 |
| Escherichia coli ECRC100 | 0.52 | OKFHMN_20700 | pncC | nicotinamide-nucleotide amidase | 0.46 | OKFHMN_19255 | yggS | pyridoxal phosphate homeostasis protein | 0.68 | 56 |
| Escherichia coli ECRC102 | 0.52 | NIAGMN_18470 | pncC | nicotinamide-nucleotide amidase | 0.46 | NIAGMN_17020 | yggS | pyridoxal phosphate homeostasis protein | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.50 | GFF4694 | | C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS | 0.46 | GFF3054 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 78 |
| Klebsiella michiganensis M5al | 0.49 | BWI76_RS22185 | | hypothetical protein | 0.48 | BWI76_RS24100 | | YggS family pyridoxal phosphate enzyme | low | > 92 |
| Paraburkholderia sabiae LMG 24235 | 0.47 | QEN71_RS27055 | | CinA family protein | 0.41 | QEN71_RS26595 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 153 |
| Serratia liquefaciens MT49 | 0.47 | IAI46_03835 | | nicotinamide-nucleotide amidase | 0.40 | IAI46_21410 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.46 | LU632_RS15740 | pncC | nicotinamide-nucleotide amidase | 0.42 | LU632_RS05460 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.46 | HER17_RS05040 | | nicotinamide-nucleotide amidase | 0.43 | HER17_RS03810 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 75 |
| Pseudomonas stutzeri RCH2 | 0.46 | Psest_2873 | | competence/damage-inducible protein CinA C-terminal domain | 0.41 | Psest_0284 | | pyridoxal phosphate enzyme, YggS family | low | > 67 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.46 | Psyr_1377 | | CinA, C-terminal | 0.39 | Psyr_0477 | | Protein of unknown function UPF0001 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.46 | Psyr_1377 | | CinA, C-terminal | 0.39 | Psyr_0477 | | Protein of unknown function UPF0001 | low | > 86 |
| Vibrio cholerae E7946 ATCC 55056 | 0.46 | CSW01_02870 | | CinA family protein | 0.41 | CSW01_02455 | | YggS family pyridoxal phosphate enzyme | low | > 62 |
| Burkholderia phytofirmans PsJN | 0.45 | BPHYT_RS16895 | | competence damage-inducible protein A | 0.41 | BPHYT_RS03495 | | hypothetical protein | low | > 109 |
| Pantoea sp. MT58 | 0.45 | IAI47_04295 | | nicotinamide-nucleotide amidase | 0.43 | IAI47_03595 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 76 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_06305 | | nicotinamide-nucleotide amidase | 0.42 | H281DRAFT_04680 | | hypothetical protein | low | > 103 |
| Pseudomonas sp. S08-1 | 0.44 | OH686_18200 | | Nicotinamide-nucleotide amidase | 0.39 | OH686_10975 | | Pyridoxal phosphate-containing protein YggS | low | > 80 |
| Paraburkholderia graminis OAS925 | 0.44 | ABIE53_003546 | | nicotinamide-nucleotide amidase | 0.40 | ABIE53_000841 | | pyridoxal phosphate enzyme (YggS family) | low | > 113 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.44 | DVU1033 | cinA | competence/damage-inducible protein CinA protein, truncation (TIGR) | 0.26 | DVU0051 | | conserved hypothetical protein TIGR00044 (TIGR) | low | > 55 |
| Pseudomonas fluorescens SBW25 | 0.44 | PFLU_RS05880 | | CinA family protein | 0.38 | PFLU_RS28370 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.44 | PFLU_RS05880 | | CinA family protein | 0.38 | PFLU_RS28370 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 109 |
| Pseudomonas simiae WCS417 | 0.44 | PS417_05810 | | damage-inducible protein CinA | 0.39 | PS417_26725 | | hypothetical protein | low | > 88 |
| Alteromonas macleodii MIT1002 | 0.44 | MIT1002_00954 | | Nicotinamide-nucleotide amidohydrolase PncC | 0.44 | MIT1002_03061 | | pyridoxal phosphate enzyme, YggS family | low | > 70 |
| Dechlorosoma suillum PS | 0.43 | Dsui_0710 | | competence/damage-inducible protein CinA-like protein | 0.38 | Dsui_0603 | | pyridoxal phosphate enzyme, YggS family | low | > 51 |
| Pseudomonas fluorescens FW300-N2E3 | 0.43 | AO353_16800 | | damage-inducible protein CinA | 0.38 | AO353_08160 | | hypothetical protein | low | > 101 |
| Ralstonia sp. UNC404CL21Col | 0.43 | ABZR87_RS01580 | | CinA family protein | 0.40 | ABZR87_RS01225 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 80 |
| Rahnella sp. WP5 | 0.43 | EX31_RS07805 | | nicotinamide-nucleotide amidase | 0.43 | EX31_RS02685 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 89 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.43 | GFF3091 | | C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS | 0.37 | GFF2722 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 90 |
| Herbaspirillum seropedicae SmR1 | 0.42 | HSERO_RS16840 | | competence damage-inducible protein A | 0.41 | HSERO_RS18995 | | hypothetical protein | low | > 78 |
| Ralstonia solanacearum UW163 | 0.42 | UW163_RS07710 | | CinA family protein | 0.37 | UW163_RS08050 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.42 | PfGW456L13_4669 | | C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS | 0.39 | PfGW456L13_1011 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 87 |
| Ralstonia solanacearum IBSBF1503 | 0.42 | RALBFv3_RS05915 | | CinA family protein | 0.37 | RALBFv3_RS05575 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 76 |
| Cupriavidus basilensis FW507-4G11 | 0.42 | RR42_RS17625 | | damage-inducible protein CinA | 0.43 | RR42_RS17355 | | hypothetical protein | low | > 128 |
| Ralstonia solanacearum PSI07 | 0.42 | RPSI07_RS11330 | | CinA family protein | 0.35 | RPSI07_RS11725 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.42 | Pf1N1B4_3142 | | C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS | 0.38 | Pf1N1B4_2342 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.42 | AO356_05675 | | damage-inducible protein CinA | 0.39 | AO356_13425 | | hypothetical protein | low | > 104 |
| Ralstonia solanacearum GMI1000 | 0.42 | RS_RS13860 | | CinA family protein | 0.34 | RS_RS13435 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.41 | Pf6N2E2_2994 | | C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS | 0.38 | Pf6N2E2_4601 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 103 |
| Azospirillum brasilense Sp245 | 0.41 | AZOBR_RS14405 | | competence damage-inducible protein A | 0.27 | AZOBR_RS01870 | | alanine racemase | — | — |
| Pseudomonas sp. RS175 | 0.41 | PFR28_00471 | | Nicotinamide-nucleotide amidohydrolase PncC | 0.38 | PFR28_04242 | | Pyridoxal phosphate homeostasis protein | low | > 88 |
| Pseudomonas putida KT2440 | 0.41 | PP_1628 | | NMN amidohydrolase | 0.41 | PP_5094 | | putative enzyme with PLP binding domain | low | > 96 |
| Azospirillum sp. SherDot2 | 0.40 | MPMX19_01107 | | Nicotinamide-nucleotide amidohydrolase PncC | 0.27 | MPMX19_00050 | | Pyridoxal phosphate homeostasis protein | low | > 112 |
| Phocaeicola dorei CL03T12C01 | 0.40 | ABI39_RS17105 | | CinA family protein | 0.24 | ABI39_RS20000 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.40 | HMPREF1058_RS04115 | | CinA family protein | 0.24 | HMPREF1058_RS06240 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 67 |
| Magnetospirillum magneticum AMB-1 | 0.40 | AMB_RS12830 | | CinA family protein | 0.27 | AMB_RS00120 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Acidovorax sp. GW101-3H11 | 0.39 | Ac3H11_738 | | C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS | 0.37 | Ac3H11_4474 | | Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC | low | > 79 |
| Sinorhizobium meliloti 1021 | 0.39 | SMc01039 | | hypothetical protein | 0.26 | SMc02812 | | hypothetical protein | low | > 103 |
| Bacteroides stercoris CC31F | 0.38 | HMPREF1181_RS16315 | | CinA family protein | 0.25 | HMPREF1181_RS10865 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Rhizobium sp. OAE497 | 0.37 | ABIE40_RS09070 | | CinA family protein | 0.26 | ABIE40_RS19180 | | YggS family pyridoxal phosphate-dependent enzyme | — | — |
| Variovorax sp. SCN45 | 0.37 | GFF6273 | | Nicotinamide-nucleotide amidase (EC 3.5.1.42) | 0.41 | GFF3744 | | Pyridoxal phosphate-containing protein YggS | — | — |
| Kangiella aquimarina DSM 16071 | 0.37 | B158DRAFT_1530 | | competence/damage-inducible protein CinA C-terminal domain | 0.43 | B158DRAFT_0196 | | pyridoxal phosphate enzyme, YggS family | low | > 40 |
| Agrobacterium fabrum C58 | 0.36 | Atu1442 | | competence/damage-inducible protein CinA | 0.25 | Atu2747 | | hypothetical protein | 0.13 | 84 |
| Parabacteroides merdae CL09T00C40 | 0.35 | HMPREF1078_RS09765 | | CinA family protein | 0.24 | HMPREF1078_RS15965 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 61 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.35 | A4249_RS04795 | | CinA family protein | 0.27 | A4249_RS13760 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 48 |
| Castellaniella sp019104865 MT123 | 0.33 | ABCV34_RS10110 | | CinA family protein | 0.28 | ABCV34_RS02955 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 48 |
| Caulobacter crescentus NA1000 | 0.33 | CCNA_01811 | | competence/damage-inducible protein CinA | 0.28 | CCNA_03861 | | pyridoxal 5'-phosphate dependent enzyme class III | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.33 | CCNA_01811 | | competence/damage-inducible protein CinA | 0.28 | CCNA_03861 | | pyridoxal 5'-phosphate dependent enzyme class III | low | > 67 |
| Bosea sp. OAE506 | 0.26 | ABIE41_RS16805 | | CinA family protein | 0.29 | ABIE41_RS04720 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 77 |
| Bifidobacterium breve UCC2003 | 0.22 | BBR_RS16545 | | CinA family protein | 0.21 | BBR_RS11570 | | YggS family pyridoxal phosphate-dependent enzyme | low | > 34 |
Not shown: 0 genomes with orthologs for Xcc-8004.3118.1 only; 21 genomes with orthologs for Xcc-8004.1711.1 only