Conservation of cofitness between Rv0480c and Rv2899c in Mycobacterium tuberculosis H37Rv

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Mycobacterium tuberculosis H37Rv 1.0 Rv0480c Possible amidohydrolase 1.0 Rv2899c Possible FdhD protein homolog 0.49 13
Klebsiella pneumoniae MKP103 0.31 KDGMDA_16350 deaminated glutathione amidase 0.19 KDGMDA_09080 formate dehydrogenase accessory sulfurtransferase FdhD low > 95
Klebsiella michiganensis M5al 0.30 BWI76_RS07990 carbon-nitrogen hydrolase 0.18 BWI76_RS00475 sulfurtransferase FdhD — —
Pantoea agglomerans CFBP13505 P0401 0.29 PagCFBP13505_RS03225 deaminated glutathione amidase 0.20 PagCFBP13505_RS15775 formate dehydrogenase accessory sulfurtransferase FdhD low > 74
Dickeya dianthicola ME23 0.29 DZA65_RS06520 deaminated glutathione amidase 0.20 DZA65_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD low > 75
Dickeya dianthicola 67-19 0.29 HGI48_RS06175 deaminated glutathione amidase 0.20 HGI48_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD low > 71
Dickeya dadantii 3937 0.29 DDA3937_RS06130 deaminated glutathione amidase 0.19 DDA3937_RS20955 formate dehydrogenase accessory sulfurtransferase FdhD low > 74
Pantoea sp. MT58 0.27 IAI47_14065 deaminated glutathione amidase 0.19 IAI47_18740 formate dehydrogenase accessory sulfurtransferase FdhD low > 76
Erwinia amylovora T8 0.27 OLJFJH_17270 deaminated glutathione amidase 0.18 OLJFJH_05050 formate dehydrogenase accessory sulfurtransferase FdhD low > 58
Enterobacter asburiae PDN3 0.27 EX28DRAFT_2337 Predicted amidohydrolase 0.19 EX28DRAFT_4379 formate dehydrogenase family accessory protein FdhD low > 76
Enterobacter sp. TBS_079 0.25 MPMX20_01285 Deaminated glutathione amidase 0.19 MPMX20_04574 Sulfur carrier protein FdhD low > 85
Rahnella sp. WP5 0.25 EX31_RS23065 deaminated glutathione amidase 0.19 EX31_RS05780 formate dehydrogenase accessory sulfurtransferase FdhD low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF4538 Aliphatic amidase AmiE (EC 3.5.1.4) 0.16 GFF2254 Formate dehydrogenase chain D (EC 1.2.1.2) low > 78
Pectobacterium carotovorum WPP14 0.24 HER17_RS17575 deaminated glutathione amidase 0.20 HER17_RS21105 formate dehydrogenase accessory sulfurtransferase FdhD low > 75
Pseudomonas putida KT2440 0.23 PP_4463 Carbon-nitrogen hydrolase family protein 0.17 PP_0257 protein sulfur transferase low > 96
Escherichia coli ECRC62 0.23 BNILDI_21795 tatE deaminated glutathione amidase 0.18 BNILDI_05455 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 75
Escherichia coli Nissle 1917 0.23 ECOLIN_RS03410 deaminated glutathione amidase 0.18 ECOLIN_RS22460 formate dehydrogenase accessory sulfurtransferase FdhD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_03080 Deaminated glutathione amidase 0.18 OHPLBJKB_04155 Sulfur carrier protein FdhD low > 74
Escherichia coli ECRC98 0.23 JDDGAC_11055 tatE deaminated glutathione amidase 0.18 JDDGAC_17575 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 87
Escherichia coli ECRC99 0.23 KEDOAH_20560 tatE deaminated glutathione amidase 0.18 KEDOAH_14205 fdhD formate dehydrogenase accessory sulfurtransferase FdhD — —
Escherichia coli ECOR27 0.23 NOLOHH_23785 tatE deaminated glutathione amidase 0.18 NOLOHH_06070 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 76
Escherichia coli BL21 0.23 ECD_00595 putative NAD(P)-binding amidase-type enzyme YbeM (C-N hydrolase family) 0.18 ECD_03780 formate dehydrogenase formation protein low > 61
Escherichia coli ECRC102 0.23 NIAGMN_05465 tatE deaminated glutathione amidase 0.18 NIAGMN_11705 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 80
Escherichia coli ECOR38 0.23 HEPCGN_00865 tatE deaminated glutathione amidase 0.18 HEPCGN_12585 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 88
Escherichia coli ECRC101 0.23 MCAODC_26625 tatE deaminated glutathione amidase 0.18 MCAODC_04450 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 87
Escherichia coli ECRC100 0.23 OKFHMN_07410 tatE deaminated glutathione amidase 0.18 OKFHMN_13950 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 79
Escherichia fergusonii Becca 0.23 EFB2_03466 Deaminated glutathione amidase 0.18 EFB2_04720 Sulfur carrier protein FdhD low > 86
Dinoroseobacter shibae DFL-12 0.22 Dshi_3506 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.12 Dshi_3282 formate dehydrogenase subunit FdhD (RefSeq) low > 64
Rhodopseudomonas palustris CGA009 0.21 TX73_003100 carbon-nitrogen hydrolase family protein 0.21 TX73_003800 formate dehydrogenase accessory sulfurtransferase FdhD low > 86
Sinorhizobium meliloti 1021 0.21 SMc02442 hydrolase 0.17 SMc03085 formate dehydrogenase accessory protein low > 103
Vibrio cholerae E7946 ATCC 55056 0.21 CSW01_02215 carbon-nitrogen hydrolase family protein 0.13 CSW01_07625 sulfurtransferase FdhD low > 62
Xanthobacter sp. DMC5 0.21 GFF102 Deaminated glutathione amidase 0.20 GFF208 Sulfur carrier protein FdhD — —
Azospirillum sp. SherDot2 0.19 MPMX19_02429 Deaminated glutathione amidase 0.23 MPMX19_03500 Sulfur carrier protein FdhD low > 112
Pseudomonas stutzeri RCH2 0.19 Psest_3321 Predicted amidohydrolase 0.18 Psest_3964 formate dehydrogenase family accessory protein FdhD low > 67
Rhizobium sp. OAE497 0.19 ABIE40_RS17345 carbon-nitrogen hydrolase family protein 0.20 ABIE40_RS17840 formate dehydrogenase accessory sulfurtransferase FdhD low > 107
Pseudomonas sp. BP01 0.18 JOY50_RS11065 carbon-nitrogen hydrolase family protein 0.17 JOY50_RS26450 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 84
Burkholderia phytofirmans PsJN 0.18 BPHYT_RS03545 apolipoprotein acyltransferase 0.20 BPHYT_RS03240 formate dehydrogenase accessory protein FdhD low > 109
Azospirillum brasilense Sp245 0.18 AZOBR_RS02920 amidohydrolase 0.24 AZOBR_RS18415 formate dehydrogenase accessory protein FdhD low > 97
Pseudomonas sp. DMC3 0.18 GFF1815 Deaminated glutathione amidase 0.18 GFF4166 Sulfur carrier protein FdhD low > 89
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS05880 acyltransferase 0.22 RR42_RS03765 formate dehydrogenase low > 128
Marinobacter adhaerens HP15 0.18 HP15_2449 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.18 HP15_4175 formate dehydrogenase, subunit FdhD low > 73
Caulobacter crescentus NA1000 0.18 CCNA_00871 carbon-nitrogen hydrolase family protein 0.19 CCNA_01300 formate dehydrogenase accessory protein fdhD low > 66
Caulobacter crescentus NA1000 Δfur 0.18 CCNA_00871 carbon-nitrogen hydrolase family protein 0.19 CCNA_01300 formate dehydrogenase accessory protein fdhD low > 67
Pseudomonas fluorescens FW300-N2E3 0.17 AO353_05220 carbon-nitrogen hydrolase 0.20 AO353_11830 formate dehydrogenase family accessory protein FdhD low > 101
Agrobacterium fabrum C58 0.17 Atu3510 amidohydrolase 0.21 Atu2619 NAD-dependent formate dehydrogenase, C subunit protein low > 89
Pseudomonas simiae WCS417 0.17 PS417_04280 carbon-nitrogen hydrolase 0.18 PS417_01270 iron ABC transporter substrate-binding protein low > 88
Pseudomonas sp. SVBP6 0.17 COO64_RS04220 carbon-nitrogen hydrolase family protein 0.17 COO64_RS00630 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 93
Shewanella oneidensis MR-1 0.17 SO4092 hydrolase, carbon-nitrogen family (NCBI ptt file) 0.20 SO0107 fdhD formate dehydrogenase accessory protein FdhD (NCBI ptt file) low > 76
Pseudomonas orientalis W4I3 0.17 QF045_RS12970 carbon-nitrogen hydrolase family protein 0.18 QF045_RS04395 formate dehydrogenase accessory sulfurtransferase FdhD low > 93
Pseudomonas lactucae CFBP13502 0.17 GEMAOFIL_01061 Deaminated glutathione amidase 0.18 GEMAOFIL_00479 Sulfur carrier protein FdhD low > 96
Pseudomonas fluorescens FW300-N2C3 0.17 AO356_07100 carbon-nitrogen hydrolase 0.21 AO356_10100 formate dehydrogenase family accessory protein FdhD low > 104
Pseudomonas fluorescens FW300-N1B4 0.17 Pf1N1B4_1093 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.19 Pf1N1B4_1673 Formate dehydrogenase chain D (EC 1.2.1.2) low > 87
Pseudomonas fluorescens FW300-N2E2 0.17 Pf6N2E2_3281 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.21 Pf6N2E2_3890 Formate dehydrogenase chain D (EC 1.2.1.2) low > 103
Pseudomonas fluorescens SBW25-INTG 0.17 PFLU_RS04335 carbon-nitrogen hydrolase family protein 0.19 PFLU_RS01365 formate dehydrogenase accessory sulfurtransferase FdhD low > 109
Pseudomonas fluorescens SBW25 0.17 PFLU_RS04335 carbon-nitrogen hydrolase family protein 0.19 PFLU_RS01365 formate dehydrogenase accessory sulfurtransferase FdhD low > 109
Pseudomonas sp. RS175 0.17 PFR28_00160 Deaminated glutathione amidase 0.20 PFR28_04882 Sulfur carrier protein FdhD low > 88
Pseudomonas fluorescens GW456-L13 0.17 PfGW456L13_5027 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.19 PfGW456L13_408 Formate dehydrogenase chain D (EC 1.2.1.2) low > 87
Sphingomonas koreensis DSMZ 15582 0.17 Ga0059261_3603 Predicted amidohydrolase 0.19 Ga0059261_3871 formate dehydrogenase family accessory protein FdhD low > 68
Pseudomonas aeruginosa PA14 0.17 IKLFDK_01705 carbon-nitrogen hydrolase 0.18 IKLFDK_27585 formate dehydrogenase accessory sulfurtransferase FdhD low > 98
Pseudomonas segetis P6 0.17 MPMX49_03866 Deaminated glutathione amidase 0.16 MPMX49_04389 Sulfur carrier protein FdhD low > 75
Pseudomonas aeruginosa MRSN321 0.16 DY961_RS24100 carbon-nitrogen hydrolase family protein 0.19 DY961_RS11760 fdhD;go_component=formate formate dehydrogenase accessory sulfurtransferase FdhD low > 100
Pseudomonas aeruginosa PUPa3 0.16 DQ20_RS56560 carbon-nitrogen hydrolase family protein 0.20 DQ20_RS50350 fdhD;go_component=formate formate dehydrogenase accessory sulfurtransferase FdhD low > 101
Pseudomonas syringae pv. syringae B728a 0.16 Psyr_4157 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.19 Psyr_4945 Formate dehydrogenase, subunit FdhD low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.16 Psyr_4157 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.19 Psyr_4945 Formate dehydrogenase, subunit FdhD low > 86
Methylophilus sp. DMC18 0.16 GFF381 Deaminated glutathione amidase 0.21 GFF2440 Sulfur carrier protein FdhD low > 43
Serratia liquefaciens MT49 0.16 IAI46_22690 carbon-nitrogen hydrolase family protein 0.20 IAI46_00205 formate dehydrogenase accessory sulfurtransferase FdhD low > 87
Shewanella sp. ANA-3 0.16 Shewana3_3642 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.20 Shewana3_0108 formate dehydrogenase accessory protein (RefSeq) low > 73
Castellaniella sp019104865 MT123 0.16 ABCV34_RS02585 carbon-nitrogen hydrolase family protein 0.18 ABCV34_RS00240 formate dehydrogenase accessory sulfurtransferase FdhD low > 48
Sphingobium sp. HT1-2 0.16 GFF2532 FIG147869: Carbon-nitrogen hydrolase 0.16 GFF769 Sulfur carrier protein FdhD low > 95
Shewanella amazonensis SB2B 0.16 Sama_0473 carbon-nitrogen family hydrolase (RefSeq) 0.11 Sama_3619 formate dehydrogenase accessory protein FdhD, putative (RefSeq) low > 62
Ralstonia solanacearum GMI1000 0.16 RS_RS13310 carbon-nitrogen hydrolase family protein 0.19 RS_RS22200 sulfurtransferase FdhD — —
Ralstonia solanacearum PSI07 0.16 RPSI07_RS11855 carbon-nitrogen hydrolase family protein 0.22 RPSI07_RS04845 sulfurtransferase FdhD low > 81
Xanthomonas campestris pv. campestris strain 8004 0.16 Xcc-8004.2374.1 N-carbamoylputrescine amidase (3.5.1.53) / Aliphatic amidase AmiE (EC 3.5.1.4) 0.26 Xcc-8004.2194.1 Formate dehydrogenase chain D (EC 1.2.1.2) — —
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS00080 carbon-nitrogen hydrolase family protein 0.20 QEN71_RS02080 formate dehydrogenase accessory sulfurtransferase FdhD low > 153
Herbaspirillum seropedicae SmR1 0.16 HSERO_RS07150 apolipoprotein acyltransferase 0.21 HSERO_RS07435 formate dehydrogenase accessory protein FdhD low > 78
Ralstonia sp. UNC404CL21Col 0.15 ABZR87_RS01100 carbon-nitrogen hydrolase family protein 0.20 ABZR87_RS19685 formate dehydrogenase accessory sulfurtransferase FdhD low > 80
Shewanella loihica PV-4 0.15 Shew_0409 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.11 Shew_0053 formate dehydrogenase, subunit FdhD (RefSeq) low > 60
Ralstonia solanacearum UW163 0.15 UW163_RS08175 carbon-nitrogen hydrolase family protein 0.22 UW163_RS20380 sulfurtransferase FdhD — —
Ralstonia solanacearum IBSBF1503 0.15 RALBFv3_RS05450 carbon-nitrogen hydrolase family protein 0.22 RALBFv3_RS18750 sulfurtransferase FdhD — —
Dyella japonica UNC79MFTsu3.2 0.14 ABZR86_RS02125 amidohydrolase 0.24 ABZR86_RS03590 formate dehydrogenase accessory sulfurtransferase FdhD low > 74
Lysobacter sp. OAE881 0.13 ABIE51_RS09320 carbon-nitrogen hydrolase 0.23 ABIE51_RS14800 formate dehydrogenase accessory sulfurtransferase FdhD — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.13 ABZR88_RS03405 amidohydrolase 0.43 ABZR88_RS07865 formate dehydrogenase accessory sulfurtransferase FdhD 0.49 18
Alteromonas macleodii MIT1002 0.12 MIT1002_00226 (R)-stereoselective amidase 0.18 MIT1002_01712 formate dehydrogenase accessory protein low > 70

Not shown: 28 genomes with orthologs for Rv0480c only; 5 genomes with orthologs for Rv2899c only