Conservation of cofitness between RR42_RS00940 and RR42_RS17010 in Cupriavidus basilensis FW507-4G11

76 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS00940 biotin synthase 1.0 RR42_RS17010 L-aspartate oxidase 0.69 4
Paraburkholderia sabiae LMG 24235 0.74 QEN71_RS01085 biotin synthase BioB 0.80 QEN71_RS03070 L-aspartate oxidase — —
Paraburkholderia graminis OAS925 0.73 ABIE53_000577 biotin synthase 0.81 ABIE53_003292 L-aspartate oxidase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_02097 biotin synthase 0.81 H281DRAFT_04069 L-aspartate oxidase low > 103
Burkholderia phytofirmans PsJN 0.73 BPHYT_RS02150 biotin synthase 0.80 BPHYT_RS15640 L-aspartate oxidase low > 109
Ralstonia solanacearum PSI07 0.71 RPSI07_RS22850 biotin synthase BioB 0.83 RPSI07_RS12660 L-aspartate oxidase low > 81
Ralstonia solanacearum GMI1000 0.71 RS_RS01305 biotin synthase 0.83 RS_RS12285 L-aspartate oxidase low > 80
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS10465 biotin synthase BioB 0.83 RALBFv3_RS04725 L-aspartate oxidase low > 76
Ralstonia solanacearum UW163 0.71 UW163_RS03115 biotin synthase BioB 0.83 UW163_RS08945 L-aspartate oxidase — —
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS06265 biotin synthase BioB 0.83 ABZR87_RS00345 L-aspartate oxidase 0.84 1
Hydrogenophaga sp. GW460-11-11-14-LB1 0.62 GFF3992 Biotin synthase (EC 2.8.1.6) 0.67 GFF1214 L-aspartate oxidase (EC 1.4.3.16) low > 90
Marinobacter adhaerens HP15 0.62 HP15_2486 biotin synthase 0.63 HP15_774 L-aspartate oxidase low > 73
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_0864 biotin synthase (EC 2.8.1.6) 0.63 B158DRAFT_2179 L-aspartate oxidase (EC 1.4.3.16) — —
Castellaniella sp019104865 MT123 0.61 ABCV34_RS15280 biotin synthase BioB 0.66 ABCV34_RS03690 L-aspartate oxidase low > 48
Pseudomonas stutzeri RCH2 0.61 Psest_0411 biotin synthetase 0.65 Psest_3101 L-aspartate oxidase low > 67
Pseudomonas putida KT2440 0.61 PP_0362 Biotin synthase 0.65 PP_1426 L-aspartate oxidase 0.51 39
Acidovorax sp. GW101-3H11 0.60 Ac3H11_2272 Biotin synthase (EC 2.8.1.6) 0.65 Ac3H11_3824 L-aspartate oxidase (EC 1.4.3.16) low > 79
Dechlorosoma suillum PS 0.60 Dsui_1297 biotin synthetase 0.71 Dsui_2452 L-aspartate oxidase — —
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS12235 biotin synthase 0.74 HSERO_RS11085 L-aspartate oxidase low > 78
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_4687 biotin synthase 0.65 Psyr_3959 L-aspartate oxidase low > 86
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_4687 biotin synthase 0.65 Psyr_3959 L-aspartate oxidase low > 86
Pseudomonas sp. S08-1 0.60 OH686_10355 biotin synthase 0.64 OH686_20040 L-aspartate oxidase low > 80
Alteromonas macleodii MIT1002 0.60 MIT1002_01379 Biotin synthase 0.58 MIT1002_02720 L-aspartate oxidase — —
Pseudomonas sp. RS175 0.60 PFR28_04103 Biotin synthase 0.65 PFR28_00689 L-aspartate oxidase 0.37 35
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) 0.63 Pf6N2E2_2758 L-aspartate oxidase (EC 1.4.3.16) low > 103
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_14135 biotin synthase 0.64 AO356_04580 L-aspartate oxidase low > 104
Shewanella amazonensis SB2B 0.59 Sama_1438 biotin synthase (RefSeq) 0.62 Sama_0873 L-aspartate oxidase (RefSeq) — —
Pseudomonas simiae WCS417 0.59 PS417_26005 biotin synthase 0.64 PS417_07115 L-aspartate oxidase low > 88
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_1147 Biotin synthase (EC 2.8.1.6) 0.64 PfGW456L13_4517 L-aspartate oxidase (EC 1.4.3.16) 0.61 78
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_07525 biotin synthase 0.65 AO353_17620 L-aspartate oxidase low > 101
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_2487 Biotin synthase (EC 2.8.1.6) 0.64 Pf1N1B4_3322 L-aspartate oxidase (EC 1.4.3.16) low > 87
Shewanella sp. ANA-3 0.59 Shewana3_2519 biotin synthase (RefSeq) 0.61 Shewana3_3033 L-aspartate oxidase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_05645 biotin synthase 0.61 CSW01_12495 L-aspartate oxidase low > 62
Shewanella oneidensis MR-1 0.59 SO2740 bioB biotin synthase (NCBI ptt file) 0.61 SO1341 nadB L-aspartate oxidase (NCBI ptt file) — —
Pantoea sp. MT58 0.59 IAI47_13530 biotin synthase BioB 0.60 IAI47_04845 L-aspartate oxidase low > 76
Pseudomonas fluorescens SBW25 0.59 PFLU_RS27650 biotin synthase BioB 0.64 PFLU_RS07225 L-aspartate oxidase 0.74 3
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS27650 biotin synthase BioB 0.64 PFLU_RS07225 L-aspartate oxidase 0.56 8
Sphingomonas koreensis DSMZ 15582 0.59 Ga0059261_3989 biotin synthase (EC 2.8.1.6) 0.57 Ga0059261_2248 L-aspartate oxidase (EC 1.4.3.16) — —
Variovorax sp. OAS795 0.59 ABID97_RS13955 biotin synthase BioB 0.68 ABID97_RS07440 L-aspartate oxidase low > 91
Variovorax sp. SCN45 0.58 GFF937 Biotin synthase (EC 2.8.1.6) 0.70 GFF2580 L-aspartate oxidase (EC 1.4.3.16) low > 127
Escherichia coli Nissle 1917 0.58 ECOLIN_RS04130 biotin synthase BioB 0.59 ECOLIN_RS14570 L-aspartate oxidase low > 55
Escherichia fergusonii Becca 0.58 EFB2_03330 Biotin synthase 0.59 EFB2_01322 L-aspartate oxidase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_02938 Biotin synthase 0.59 OHPLBJKB_01133 L-aspartate oxidase low > 73
Escherichia coli BW25113 0.58 b0775 bioB biotin synthase (NCBI) 0.60 b2574 nadB L-aspartate oxidase (NCBI) 0.49 6
Escherichia coli ECRC98 0.58 JDDGAC_10035 bioB biotin synthase BioB 0.59 JDDGAC_25035 nadB L-aspartate oxidase low > 86
Escherichia coli ECOR38 0.58 HEPCGN_01640 bioB biotin synthase BioB 0.59 HEPCGN_20515 nadB L-aspartate oxidase low > 87
Escherichia coli ECRC102 0.58 NIAGMN_04445 bioB biotin synthase BioB 0.59 NIAGMN_19140 nadB L-aspartate oxidase — —
Escherichia coli ECRC100 0.58 OKFHMN_06400 bioB biotin synthase BioB 0.59 OKFHMN_21370 nadB L-aspartate oxidase low > 80
Escherichia coli ECRC62 0.58 BNILDI_21040 bioB biotin synthase BioB 0.60 BNILDI_11845 nadB L-aspartate oxidase low > 75
Escherichia coli ECRC101 0.58 MCAODC_25615 bioB biotin synthase BioB 0.59 MCAODC_11900 nadB L-aspartate oxidase 0.89 5
Escherichia coli ECOR27 0.58 NOLOHH_22770 bioB biotin synthase BioB 0.60 NOLOHH_13045 nadB L-aspartate oxidase 0.71 5
Escherichia coli BL21 0.58 ECD_00742 biotin synthase 0.59 ECD_02468 quinolinate synthase, L-aspartate oxidase (B protein) subunit low > 61
Escherichia coli ECRC99 0.58 KEDOAH_21510 bioB biotin synthase BioB 0.59 KEDOAH_06850 nadB L-aspartate oxidase — —
Klebsiella michiganensis M5al 0.58 BWI76_RS08760 biotin synthase 0.59 BWI76_RS21360 L-aspartate oxidase 0.31 26
Enterobacter sp. TBS_079 0.58 MPMX20_01403 Biotin synthase 0.58 MPMX20_03445 L-aspartate oxidase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF671 Biotin synthase (EC 2.8.1.6) 0.60 GFF2106 L-aspartate oxidase (EC 1.4.3.16) low > 78
Rahnella sp. WP5 0.58 EX31_RS23695 biotin synthase BioB 0.60 EX31_RS21795 L-aspartate oxidase low > 89
Serratia liquefaciens MT49 0.58 IAI46_06525 biotin synthase BioB 0.61 IAI46_19590 L-aspartate oxidase low > 86
Enterobacter asburiae PDN3 0.58 EX28DRAFT_2216 biotin synthase (EC 2.8.1.6) 0.59 EX28DRAFT_0071 L-aspartate oxidase (EC 1.4.3.16) low > 76
Dickeya dadantii 3937 0.58 DDA3937_RS08510 biotin synthase BioB 0.60 DDA3937_RS15770 L-aspartate oxidase 0.65 53
Pectobacterium carotovorum WPP14 0.58 HER17_RS13460 biotin synthase BioB 0.59 HER17_RS05775 L-aspartate oxidase low > 75
Dickeya dianthicola ME23 0.57 DZA65_RS08965 biotin synthase BioB 0.60 DZA65_RS16935 L-aspartate oxidase 0.56 40
Dickeya dianthicola 67-19 0.57 HGI48_RS08675 biotin synthase BioB 0.61 HGI48_RS15855 L-aspartate oxidase low > 71
Magnetospirillum magneticum AMB-1 0.57 AMB_RS13865 biotin synthase 0.57 AMB_RS19650 L-aspartate oxidase — —
Shewanella loihica PV-4 0.57 Shew_1719 biotin synthase (RefSeq) 0.60 Shew_1047 L-aspartate oxidase (RefSeq) — —
Acinetobacter radioresistens SK82 0.56 MPMX26_01785 Biotin synthase 0.59 MPMX26_02162 L-aspartate oxidase low > 36
Agrobacterium fabrum C58 0.56 Atu3997 biotin synthetase 0.27 Atu4097 L-aspartate oxidase 0.82 9
Rhodopseudomonas palustris CGA009 0.55 TX73_010535 biotin synthase BioB 0.28 TX73_005420 L-aspartate oxidase — —
Rhizobium sp. OAE497 0.55 ABIE40_RS21075 biotin synthase BioB 0.24 ABIE40_RS23260 L-aspartate oxidase low > 107
Synechococcus elongatus PCC 7942 0.52 Synpcc7942_0419 bioB biotin synthase 0.34 Synpcc7942_1881 nadB L-aspartate oxidase — —
Pedobacter sp. GW460-11-11-14-LB5 0.47 CA265_RS09475 biotin synthase BioB 0.46 CA265_RS21185 L-aspartate oxidase low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.47 ABZR88_RS10190 biotin synthase BioB 0.45 ABZR88_RS20645 L-aspartate oxidase — —
Mycobacterium tuberculosis H37Rv 0.25 Rv1589 Probable biotin synthetase BioB 0.26 Rv1595 Probable L-aspartate oxidase NadB — —
Parabacteroides merdae CL09T00C40 0.25 HMPREF1078_RS15300 biotin synthase BioB 0.44 HMPREF1078_RS06605 L-aspartate oxidase — —
Desulfovibrio vulgaris Hildenborough JW710 0.23 DVU2558 bioB biotin synthase (Dmitry Rodionov) 0.36 DVU1809 nadB L-aspartate oxidase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.23 DvMF_1001 biotin synthase (RefSeq) 0.36 DvMF_0526 L-aspartate oxidase (RefSeq) — —
Phocaeicola dorei CL03T12C01 0.22 ABI39_RS14240 biotin synthase BioB 0.43 ABI39_RS05945 L-aspartate oxidase — —

Not shown: 15 genomes with orthologs for RR42_RS00940 only; 8 genomes with orthologs for RR42_RS17010 only