Conservation of cofitness between RR42_RS17675 and RR42_RS15475 in Cupriavidus basilensis FW507-4G11

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS17675 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 1.0 RR42_RS15475 protein tolQ 0.47 15
Ralstonia solanacearum PSI07 0.79 RPSI07_RS11275 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.87 RPSI07_RS20315 protein TolQ low > 81
Ralstonia solanacearum GMI1000 0.79 RS_RS13915 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.83 RS_RS03685 protein TolQ low > 80
Ralstonia solanacearum UW163 0.78 UW163_RS07655 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.87 UW163_RS00655 protein TolQ — —
Ralstonia solanacearum IBSBF1503 0.78 RALBFv3_RS05970 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.87 RALBFv3_RS12910 protein TolQ low > 76
Ralstonia sp. UNC404CL21Col 0.78 ABZR87_RS01630 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.87 ABZR87_RS08970 protein TolQ low > 80
Paraburkholderia sabiae LMG 24235 0.73 QEN71_RS27145 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.74 QEN71_RS26250 protein TolQ — —
Paraburkholderia graminis OAS925 0.72 ABIE53_003563 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.73 ABIE53_000885 biopolymer transport protein TolQ low > 113
Paraburkholderia bryophila 376MFSha3.1 0.72 H281DRAFT_06288 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.73 H281DRAFT_04722 Cell division and transport-associated protein TolQ low > 103
Burkholderia phytofirmans PsJN 0.72 BPHYT_RS16990 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.74 BPHYT_RS03710 protein tolQ — —
Herbaspirillum seropedicae SmR1 0.71 HSERO_RS01965 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.69 HSERO_RS06125 protein tolQ — —
Methylophilus sp. DMC18 0.69 GFF2071 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-m eso-2,6-diaminoheptandioate ligase 0.60 GFF2329 Tol-Pal system protein TolQ — —
Dechlorosoma suillum PS 0.67 Dsui_0384 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.70 Dsui_0482 TolQ protein — —
Variovorax sp. SCN45 0.61 GFF4445 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (EC 6.3.2.-) 0.57 GFF575 Tol-Pal system protein TolQ low > 127
Castellaniella sp019104865 MT123 0.60 ABCV34_RS10690 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.62 ABCV34_RS09835 protein TolQ — —
Pseudomonas simiae WCS417 0.59 PS417_24800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.49 PS417_22435 protein tolQ — —
Pseudomonas fluorescens SBW25 0.59 PFLU_RS26735 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.50 PFLU_RS24075 protein TolQ — —
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS26735 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.50 PFLU_RS24075 protein TolQ — —
Variovorax sp. OAS795 0.59 ABID97_RS06355 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.57 ABID97_RS17970 protein TolQ low > 91
Pseudomonas lactucae CFBP13502 0.59 GEMAOFIL_05114 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.50 GEMAOFIL_04639 Tol-Pal system protein TolQ — —
Alteromonas macleodii MIT1002 0.59 MIT1002_00168 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.49 MIT1002_01335 Biopolymer transport protein ExbB — —
Pseudomonas sp. RS175 0.59 PFR28_03883 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.49 PFR28_03410 Tol-Pal system protein TolQ — —
Pseudomonas aeruginosa PA14 0.59 IKLFDK_20730 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.49 IKLFDK_04385 protein TolQ — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF583 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.57 GFF5173 MotA/TolQ/ExbB proton channel family protein — —
Shewanella loihica PV-4 0.58 Shew_3144 UDP-N-acetylmuramate (RefSeq) 0.48 Shew_1524 MotA/TolQ/ExbB proton channel (RefSeq) low > 60
Pseudomonas putida KT2440 0.58 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.48 PP_1219 subunit of a proton-driven complex used for maintenance of outer membrane stability — —
Shewanella oneidensis MR-1 0.58 SO3805 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (NCBI ptt file) 0.49 SO2751 MotA/TolQ/ExbB proton channel family protein (NCBI ptt file) — —
Pseudomonas sp. S08-1 0.58 OH686_09400 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.51 OH686_19145 protein TolQ — —
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_4982 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.48 Pf6N2E2_5539 MotA/TolQ/ExbB proton channel family protein — —
Pseudomonas sp. BP01 0.58 JOY50_RS23075 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.49 JOY50_RS01805 tolQ protein TolQ — —
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_06550 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.49 AO353_03570 protein TolQ — —
Pseudomonas sp. DMC3 0.58 GFF3860 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-m eso-2,6-diaminoheptandioate ligase 0.49 GFF5182 Tol-Pal system protein TolQ — —
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_1344 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.49 PfGW456L13_1855 MotA/TolQ/ExbB proton channel family protein — —
Shewanella sp. ANA-3 0.58 Shewana3_0791 UDP-N-acetylmuramate (RefSeq) 0.50 Shewana3_2534 MotA/TolQ/ExbB proton channel (RefSeq) — —
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_15235 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.48 AO356_18035 protein TolQ — —
Pseudomonas fluorescens FW300-N1B4 0.58 Pf1N1B4_2676 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.49 Pf1N1B4_635 MotA/TolQ/ExbB proton channel family protein — —
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_12875 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.48 CSW01_09210 protein TolQ — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_0630 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.48 Psyr_1412 Cell division and transport-associated protein TolQ — —
Pseudomonas sp. SVBP6 0.58 COO64_RS15685 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.49 COO64_RS20110 tolQ protein TolQ — —
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_0630 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.48 Psyr_1412 Cell division and transport-associated protein TolQ — —
Pseudomonas stutzeri RCH2 0.58 Psest_0673 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.49 Psest_1499 TolQ protein — —
Dickeya dadantii 3937 0.57 DDA3937_RS18580 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.48 DDA3937_RS06500 Tol-Pal system protein TolQ — —
Shewanella amazonensis SB2B 0.57 Sama_0769 UDP-N-acetylmuramate (RefSeq) 0.42 Sama_2089 MotA/TolQ/ExbB proton channel (RefSeq) — —
Dickeya dianthicola 67-19 0.57 HGI48_RS18515 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.48 HGI48_RS06545 Tol-Pal system protein TolQ low > 71
Dickeya dianthicola ME23 0.57 DZA65_RS19650 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.48 DZA65_RS06895 Tol-Pal system protein TolQ low > 75
Escherichia coli ECOR38 0.56 HEPCGN_10140 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.45 HEPCGN_01450 tolQ Tol-Pal system protein TolQ low > 88
Escherichia coli ECRC98 0.56 JDDGAC_15580 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.45 JDDGAC_10475 tolQ Tol-Pal system protein TolQ low > 87
Escherichia coli ECRC62 0.56 BNILDI_07315 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.45 BNILDI_21250 tolQ Tol-Pal system protein TolQ low > 75
Escherichia coli ECOR27 0.56 NOLOHH_04200 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.45 NOLOHH_23255 tolQ Tol-Pal system protein TolQ low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_03802 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.45 OHPLBJKB_02976 Protein TolQ low > 74
Escherichia coli ECRC101 0.56 MCAODC_02445 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.45 MCAODC_26040 tolQ Tol-Pal system protein TolQ low > 88
Escherichia coli BL21 0.56 ECD_04101 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.45 ECD_00697 membrane spanning protein in TolA-TolQ-TolR complex — —
Escherichia fergusonii Becca 0.56 EFB2_04300 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.45 EFB2_03369 Tol-Pal system protein TolQ low > 86
Escherichia coli ECRC99 0.56 KEDOAH_16215 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.45 KEDOAH_21145 tolQ Tol-Pal system protein TolQ — —
Klebsiella michiganensis M5al 0.56 BWI76_RS02820 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.47 BWI76_RS08520 colicin transporter TolQ low > 92
Escherichia coli ECRC100 0.56 OKFHMN_11940 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.45 OKFHMN_06820 tolQ Tol-Pal system protein TolQ — —
Escherichia coli Nissle 1917 0.56 ECOLIN_RS24560 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.45 ECOLIN_RS03925 Tol-Pal system protein TolQ low > 55
Escherichia coli ECRC102 0.56 NIAGMN_09790 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase 0.45 NIAGMN_04870 tolQ Tol-Pal system protein TolQ low > 80
Escherichia coli BW25113 0.56 b4233 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (NCBI) 0.45 b0737 tolQ membrane spanning protein in TolA-TolQ-TolR complex (NCBI) low > 76
Klebsiella pneumoniae MKP103 0.56 KDGMDA_11310 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.48 KDGMDA_16775 Tol-Pal system protein TolQ 0.69 8
Pantoea agglomerans CFBP13505 P0401 0.56 PagCFBP13505_RS11350 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.48 PagCFBP13505_RS03605 Tol-Pal system protein TolQ low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF881 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.45 GFF4651 MotA/TolQ/ExbB proton channel family protein — —
Enterobacter sp. TBS_079 0.55 MPMX20_00515 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.47 MPMX20_01366 Tol-Pal system protein TolQ low > 85
Pantoea sp. MT58 0.55 IAI47_02755 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.48 IAI47_13700 Tol-Pal system protein TolQ low > 76
Pectobacterium carotovorum WPP14 0.55 HER17_RS02615 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.47 HER17_RS14880 Tol-Pal system protein TolQ low > 75
Serratia liquefaciens MT49 0.55 IAI46_01800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.48 IAI46_06320 Tol-Pal system protein TolQ — —
Enterobacter asburiae PDN3 0.55 EX28DRAFT_3420 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.48 EX28DRAFT_2254 TolQ protein — —
Acidovorax sp. GW101-3H11 0.54 Ac3H11_4032 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase (EC 6.3.2.-) 0.57 Ac3H11_3137 MotA/TolQ/ExbB proton channel family protein — —
Erwinia tracheiphila HP pepo 2.2 0.54 IJEDHG_06780 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.46 IJEDHG_02100 tolQ Tol-Pal system protein TolQ — —
Erwinia tracheiphila SCR3 0.54 LU632_RS02135 mpl UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.46 LU632_RS16045 tolQ Tol-Pal system protein TolQ — —
Erwinia amylovora T8 0.54 OLJFJH_02365 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.47 OLJFJH_16925 Tol-Pal system protein TolQ — —
Rahnella sp. WP5 0.54 EX31_RS08665 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.49 EX31_RS23480 Tol-Pal system protein TolQ low > 89
Marinobacter adhaerens HP15 0.52 HP15_616 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.45 HP15_2038 MotA/TolQ/ExbB proton channel — —
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_2035 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 0.48 B158DRAFT_1138 Cell division and transport-associated protein TolQ (TC 2.C.1.2.1) — —
Acinetobacter baumannii LAC-4 0.50 RR41_RS18930 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.44 RR41_RS04670 protein TolQ low > 55
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS17365 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.49 ABZR86_RS10820 protein TolQ — —
Rhodanobacter sp000427505 FW510-R12 0.49 LRK53_RS01800 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.46 LRK53_RS05140 protein TolQ — —
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_17020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-m eso-2,6-diaminoheptandioate ligase 0.47 OKGIIK_01860 tolQ protein TolQ — —
Acinetobacter radioresistens SK82 0.48 MPMX26_03053 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase 0.42 MPMX26_02191 Tol-Pal system protein TolQ low > 36
Rhodanobacter denitrificans MT42 0.48 LRK55_RS06355 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.46 LRK55_RS04670 protein TolQ — —
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS06610 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.46 LRK54_RS04890 protein TolQ — —
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.1107.1 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) 0.43 Xcc-8004.1441.1 MotA/TolQ/ExbB proton channel family protein — —
Lysobacter sp. OAE881 0.46 ABIE51_RS17450 Mur ligase family protein 0.51 ABIE51_RS05065 protein TolQ — —

Not shown: 2 genomes with orthologs for RR42_RS17675 only; 17 genomes with orthologs for RR42_RS15475 only