Conservation of cofitness between RR42_RS18310 and RR42_RS15050 in Cupriavidus basilensis FW507-4G11

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS18310 indole-3-glycerol-phosphate synthase 1.0 RR42_RS15050 DNA polymerase I 0.35 4
Ralstonia sp. UNC404CL21Col 0.74 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC 0.78 ABZR87_RS15680 DNA polymerase I low > 80
Ralstonia solanacearum GMI1000 0.72 RS_RS14450 Indole-3-glycerol phosphate synthase 1 0.78 RS_RS11195 DNA polymerase I — —
Ralstonia solanacearum UW163 0.71 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC 0.78 UW163_RS09920 DNA polymerase I — —
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC 0.78 RALBFv3_RS03750 DNA polymerase I — —
Ralstonia solanacearum PSI07 0.70 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC 0.78 RPSI07_RS13480 DNA polymerase I — —
Herbaspirillum seropedicae SmR1 0.69 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.71 HSERO_RS02260 DNA polymerase I low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.57 GFF5584 DNA polymerase I (EC 2.7.7.7) low > 90
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC 0.66 QEN71_RS17885 DNA polymerase I — —
Acidovorax sp. GW101-3H11 0.60 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.57 Ac3H11_1648 DNA polymerase I (EC 2.7.7.7) — —
Variovorax sp. SCN45 0.59 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.59 GFF4006 DNA polymerase I (EC 2.7.7.7) — —
Variovorax sp. OAS795 0.59 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC 0.59 ABID97_RS09180 DNA polymerase I 0.47 25
Dechlorosoma suillum PS 0.58 Dsui_0168 Indole-3-glycerol phosphate synthase 0.60 Dsui_0459 DNA polymerase I — —
Pseudomonas sp. S08-1 0.58 OH686_15140 Indole-3-glycerol phosphate synthase 0.51 OH686_12215 DNA polymerase I low > 80
Castellaniella sp019104865 MT123 0.57 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC 0.57 ABCV34_RS02195 DNA polymerase I — —
Pseudomonas simiae WCS417 0.57 PS417_25710 indole-3-glycerol-phosphate synthase 0.49 PS417_00405 DNA polymerase I low > 88
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_05712 indole-3-glycerol phosphate synthase 0.64 H281DRAFT_06022 DNA polymerase I low > 103
Pseudomonas fluorescens SBW25 0.56 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.49 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.49 PFLU_RS00395 DNA polymerase I low > 109
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.49 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_4579 indole-3-glycerol phosphate synthase 0.47 Psyr_0270 DNA polymerase I low > 86
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_4579 indole-3-glycerol phosphate synthase 0.47 Psyr_0270 DNA polymerase I low > 86
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.48 PfGW456L13_594 DNA polymerase I (EC 2.7.7.7) low > 87
Pseudomonas stutzeri RCH2 0.55 Psest_3647 Indole-3-glycerol phosphate synthase 0.49 Psest_4219 DNA polymerase I low > 67
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.48 Pf1N1B4_1875 DNA polymerase I (EC 2.7.7.7) — —
Pseudomonas sp. RS175 0.55 PFR28_04043 Indole-3-glycerol phosphate synthase 0.49 PFR28_04624 DNA polymerase I — —
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.65 BPHYT_RS33610 DNA polymerase I low > 109
Lysobacter sp. OAE881 0.55 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC 0.50 ABIE51_RS02010 DNA polymerase I low > 62
Paraburkholderia graminis OAS925 0.55 ABIE53_003643 indole-3-glycerol phosphate synthase 0.65 ABIE53_004852 DNA polymerase-1 — —
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_14440 indole-3-glycerol-phosphate synthase 0.49 AO356_11465 DNA polymerase I low > 104
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_07210 indole-3-glycerol-phosphate synthase 0.49 AO353_10930 DNA polymerase I low > 101
Pseudomonas putida KT2440 0.54 PP_0422 Indole-3-glycerol phosphate synthase 0.50 PP_0123 DNA polymerase I, 5 low > 96
Marinobacter adhaerens HP15 0.53 HP15_3291 indole-3-glycerol phosphate synthase 0.48 HP15_293 DNA polymerase I low > 73
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC 0.52 ABZR86_RS17015 DNA polymerase I low > 74
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC 0.51 OKGIIK_16785 polA DNA polymerase I low > 52
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.49 Xcc-8004.5105.1 DNA polymerase I (EC 2.7.7.7) — —
Rhodanobacter denitrificans MT42 0.49 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC 0.51 LRK55_RS06585 DNA polymerase I low > 63
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC 0.51 LRK54_RS06840 DNA polymerase I low > 59
Rhizobium sp. OAE497 0.48 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC 0.38 ABIE40_RS00490 DNA polymerase I — —
Rhodopseudomonas palustris CGA009 0.48 TX73_014985 indole-3-glycerol phosphate synthase TrpC 0.36 TX73_024545 DNA polymerase I — —
Agrobacterium fabrum C58 0.47 Atu1688 indole-3-glycerol-phosphate synthase 0.38 Atu0110 DNA polymerase I — —
Sinorhizobium meliloti 1021 0.46 SMc00236 Indole-3-glycerol phosphate synthase 0.38 SMc02850 DNA polymerase I low > 103
Acinetobacter radioresistens SK82 0.44 MPMX26_00983 Indole-3-glycerol phosphate synthase 0.42 MPMX26_00574 DNA polymerase I low > 36
Sphingomonas koreensis DSMZ 15582 0.44 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.36 Ga0059261_2244 DNA polymerase I (EC 2.7.7.7) low > 68
Magnetospirillum magneticum AMB-1 0.43 AMB_RS14415 indole-3-glycerol phosphate synthase TrpC 0.38 AMB_RS21305 DNA polymerase I — —
Rhodospirillum rubrum S1H 0.43 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) 0.37 Rru_A3514 DNA polymerase A (NCBI) — —
Bosea sp. OAE506 0.43 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC 0.35 ABIE41_RS03570 DNA polymerase I — —
Dinoroseobacter shibae DFL-12 0.43 Dshi_1800 Indole-3-glycerol-phosphate synthase (RefSeq) 0.37 Dshi_2909 DNA polymerase I (RefSeq) — —
Azospirillum sp. SherDot2 0.42 MPMX19_01014 Indole-3-glycerol phosphate synthase 0.37 MPMX19_04869 DNA polymerase I low > 112
Azospirillum brasilense Sp245 0.41 AZOBR_RS07450 indole-3-glycerol-phosphate synthase 0.37 AZOBR_RS30685 DNA polymerase low > 97
Phaeobacter inhibens DSM 17395 0.40 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC 0.39 PGA1_c31780 DNA polymerase I — —
Caulobacter crescentus NA1000 Δfur 0.39 CCNA_01976 Indole-3-glycerol phosphate synthase 0.39 CCNA_03577 DNA polymerase I low > 67
Caulobacter crescentus NA1000 0.39 CCNA_01976 Indole-3-glycerol phosphate synthase 0.39 CCNA_03577 DNA polymerase I low > 66
Bacteroides ovatus ATCC 8483 0.39 BACOVA_03783 indole-3-glycerol phosphate synthase 0.34 BACOVA_01357 DNA-directed DNA polymerase low > 94
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC 0.40 A4249_RS13840 DNA polymerase I — —
Bacteroides thetaiotaomicron VPI-5482 0.38 BT0529 indole-3-glycerol phosphate synthase (NCBI ptt file) 0.35 BT3260 DNA polymerase I (NCBI ptt file) low > 81
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS22900 indole-3-glycerol phosphate synthase 0.34 CA265_RS19630 DNA polymerase I low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.34 Echvi_2508 Indole-3-glycerol phosphate synthase 0.35 Echvi_1032 DNA polymerase I — —
Synechococcus elongatus PCC 7942 0.34 Synpcc7942_1197 trpC indole-3-glycerol-phosphate synthase 0.29 Synpcc7942_0194 polA DNA polymerase I — —
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS00130 indole-3-glycerol phosphate synthase TrpC 0.36 HMPREF1078_RS06335 DNA polymerase I low > 61
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS15340 indole-3-glycerol phosphate synthase TrpC 0.34 HMPREF1181_RS02070 DNA polymerase I low > 56
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS16605 indole-3-glycerol phosphate synthase TrpC 0.35 ABZR88_RS20185 DNA polymerase I — —
Phocaeicola vulgatus CL09T03C04 0.27 HMPREF1058_RS07190 indole-3-glycerol phosphate synthase TrpC 0.34 HMPREF1058_RS11500 DNA polymerase I low > 67
Phocaeicola dorei CL03T12C01 0.27 ABI39_RS21065 indole-3-glycerol phosphate synthase TrpC 0.34 ABI39_RS05440 DNA polymerase I — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.22 CA264_05070 indole-3-glycerol phosphate synthase 0.34 CA264_16535 DNA polymerase I — —

Not shown: 0 genomes with orthologs for RR42_RS18310 only; 34 genomes with orthologs for RR42_RS15050 only