Conservation of cofitness between QEN71_RS03000 and QEN71_RS29210 in Paraburkholderia sabiae LMG 24235

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS03000 ATP-dependent Clp protease adapter ClpS 1.0 QEN71_RS29210 glycine cleavage system protein GcvH 0.68 12
Burkholderia phytofirmans PsJN 0.97 BPHYT_RS15715 ATP-dependent Clp protease adapter protein ClpS 0.88 BPHYT_RS19325 glycine cleavage system H protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_04083 ATP-dependent Clp protease adaptor protein ClpS 0.88 H281DRAFT_02410 glycine cleavage system H protein low > 103
Paraburkholderia graminis OAS925 0.97 ABIE53_003307 ATP-dependent Clp protease adaptor protein ClpS 0.86 ABIE53_000237 glycine cleavage system H protein low > 113
Cupriavidus basilensis FW507-4G11 0.84 RR42_RS17110 ATP-dependent Clp protease adapter protein ClpS 0.63 RR42_RS20065 glycine cleavage system protein H low > 128
Ralstonia solanacearum GMI1000 0.83 RS_RS12375 ATP-dependent Clp protease adaptor ClpS 0.59 RS_RS16505 glycine cleavage system protein H low > 80
Ralstonia solanacearum IBSBF1503 0.82 RALBFv3_RS04815 ATP-dependent Clp protease adaptor ClpS 0.59 RALBFv3_RS08655 glycine cleavage system protein H low > 76
Ralstonia solanacearum PSI07 0.82 RPSI07_RS12570 ATP-dependent Clp protease adaptor ClpS 0.57 RPSI07_RS08580 glycine cleavage system protein H low > 81
Ralstonia sp. UNC404CL21Col 0.82 ABZR87_RS00440 ATP-dependent Clp protease adapter ClpS 0.57 ABZR87_RS03930 glycine cleavage system protein GcvH low > 80
Ralstonia solanacearum UW163 0.82 UW163_RS08855 ATP-dependent Clp protease adaptor ClpS 0.59 UW163_RS04955 glycine cleavage system protein H — —
Herbaspirillum seropedicae SmR1 0.79 HSERO_RS07025 ATP-dependent Clp protease ClpS 0.50 HSERO_RS07915 glycine cleavage system protein H 0.35 26
Variovorax sp. OAS795 0.72 ABID97_RS16915 ATP-dependent Clp protease adapter ClpS 0.43 ABID97_RS19650 glycine cleavage system protein GcvH — —
Dechlorosoma suillum PS 0.67 Dsui_0008 hypothetical protein 0.59 Dsui_2736 glycine cleavage system H protein low > 51
Acidovorax sp. GW101-3H11 0.67 Ac3H11_2457 ATP-dependent Clp protease adaptor protein ClpS 0.42 Ac3H11_166 Glycine cleavage system H protein low > 79
Azospirillum sp. SherDot2 0.56 MPMX19_00504 ATP-dependent Clp protease adapter protein ClpS 0.42 MPMX19_01030 Glycine cleavage system H protein low > 112
Agrobacterium fabrum C58 0.54 Atu1363 ATP-dependent Clp protease adaptor protein ClpS 0.42 Atu1463 glycine cleavage system component H — —
Caulobacter crescentus NA1000 Δfur 0.53 CCNA_02552 ATP-dependent Clp protease adaptor protein ClpS 0.43 CCNA_03464 glycine cleavage system H protein low > 67
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_05800 ATP-dependent Clp protease adaptor ClpS 0.51 CSW01_15335 glycine cleavage system protein H low > 62
Pectobacterium carotovorum WPP14 0.53 HER17_RS12405 ATP-dependent Clp protease adapter ClpS 0.55 HER17_RS18000 glycine cleavage system protein GcvH low > 75
Caulobacter crescentus NA1000 0.53 CCNA_02552 ATP-dependent Clp protease adaptor protein ClpS 0.43 CCNA_03464 glycine cleavage system H protein low > 66
Dickeya dadantii 3937 0.53 DDA3937_RS09555 ATP-dependent Clp protease adapter ClpS 0.51 DDA3937_RS03250 glycine cleavage system protein GcvH low > 74
Pantoea sp. MT58 0.53 IAI47_12950 ATP-dependent Clp protease adapter ClpS 0.57 IAI47_03770 glycine cleavage system protein GcvH low > 76
Sinorhizobium meliloti 1021 0.52 SMc02110 ATP-dependent Clp protease adaptor protein ClpS 0.43 SMc02048 glycine cleavage system protein H — —
Dickeya dianthicola ME23 0.52 DZA65_RS09880 ATP-dependent Clp protease adapter ClpS 0.54 DZA65_RS03440 glycine cleavage system protein GcvH low > 75
Castellaniella sp019104865 MT123 0.52 ABCV34_RS05310 ATP-dependent Clp protease adapter ClpS 0.54 ABCV34_RS08840 glycine cleavage system protein GcvH low > 48
Pseudomonas simiae WCS417 0.52 PS417_16515 Clp protease ClpS 0.59 PS417_27250 glycine cleavage system protein H low > 88
Dickeya dianthicola 67-19 0.52 HGI48_RS09570 ATP-dependent Clp protease adapter ClpS 0.55 HGI48_RS03395 glycine cleavage system protein GcvH low > 71
Escherichia coli ECRC102 0.52 NIAGMN_03830 clpS ATP-dependent Clp protease adapter ClpS 0.57 NIAGMN_17290 gcvH glycine cleavage system protein GcvH — —
Pseudomonas putida KT2440 0.52 PP_4009 ATP-dependent Clp protease adapter protein ClpS 0.62 PP_5193 glycine cleavage system H protein 2 low > 96
Escherichia coli ECRC98 0.52 JDDGAC_09425 clpS ATP-dependent Clp protease adapter ClpS 0.57 JDDGAC_23165 gcvH glycine cleavage system protein GcvH low > 86
Escherichia coli ECRC100 0.52 OKFHMN_05790 clpS ATP-dependent Clp protease adapter ClpS 0.57 OKFHMN_19525 gcvH glycine cleavage system protein GcvH low > 80
Sphingomonas koreensis DSMZ 15582 0.52 Ga0059261_1285 Uncharacterized conserved protein 0.44 Ga0059261_3257 glycine cleavage system H protein low > 68
Escherichia coli BW25113 0.52 b0881 clpS ATP-dependent Clp protease adaptor protein ClpS (NCBI) 0.57 b2904 gcvH glycine cleavage system protein H (NCBI) low > 76
Escherichia coli BL21 0.52 ECD_00886 regulatory protein for ClpA substrate specificity 0.57 ECD_02736 glycine cleavage complex lipoylprotein low > 61
Klebsiella michiganensis M5al 0.52 BWI76_RS09610 ATP-dependent Clp protease adaptor ClpS 0.55 BWI76_RS23875 glycine cleavage system protein H low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF4902 ATP-dependent Clp protease adaptor protein ClpS 0.57 GFF3004 Glycine cleavage system H protein low > 78
Escherichia fergusonii Becca 0.52 EFB2_03180 ATP-dependent Clp protease adapter protein ClpS 0.57 EFB2_00998 Glycine cleavage system H protein low > 86
Escherichia coli ECOR38 0.52 HEPCGN_22895 clpS ATP-dependent Clp protease adapter ClpS 0.59 HEPCGN_18815 gcvH glycine cleavage system protein GcvH low > 87
Shewanella loihica PV-4 0.52 Shew_1565 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) 0.55 Shew_3063 glycine cleavage system protein H (RefSeq) — —
Escherichia coli Nissle 1917 0.52 ECOLIN_RS04690 ATP-dependent Clp protease adapter ClpS 0.58 ECOLIN_RS16170 glycine cleavage system protein GcvH low > 55
Escherichia coli ECOR27 0.52 NOLOHH_22185 clpS ATP-dependent Clp protease adapter ClpS 0.57 NOLOHH_11440 gcvH glycine cleavage system protein GcvH low > 75
Escherichia coli ECRC101 0.52 MCAODC_25005 clpS ATP-dependent Clp protease adapter ClpS 0.57 MCAODC_10045 gcvH glycine cleavage system protein GcvH low > 87
Brevundimonas sp. GW460-12-10-14-LB2 0.52 A4249_RS08395 ATP-dependent Clp protease adapter ClpS 0.48 A4249_RS09330 glycine cleavage system protein GcvH low > 48
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_02787 ATP-dependent Clp protease adapter protein ClpS 0.57 OHPLBJKB_00811 Glycine cleavage system H protein low > 73
Rahnella sp. WP5 0.52 EX31_RS18565 ATP-dependent Clp protease adapter ClpS 0.54 EX31_RS21515 glycine cleavage system protein GcvH low > 89
Escherichia coli ECRC99 0.52 KEDOAH_22120 clpS ATP-dependent Clp protease adapter ClpS 0.57 KEDOAH_08615 gcvH glycine cleavage system protein GcvH — —
Escherichia coli ECRC62 0.52 BNILDI_20440 clpS ATP-dependent Clp protease adapter ClpS 0.57 BNILDI_09975 gcvH glycine cleavage system protein GcvH low > 75
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_22145 ATP-dependent Clp protease adaptor ClpS 0.60 AO356_13040 glycine cleavage system protein H low > 104
Alteromonas macleodii MIT1002 0.51 MIT1002_01833 ATP-dependent Clp protease adapter protein ClpS 0.54 MIT1002_02972 Glycine cleavage system H protein low > 70
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_27680 ATP-dependent Clp protease adaptor ClpS 0.59 AO353_08730 glycine cleavage system protein H low > 101
Pseudomonas stutzeri RCH2 0.51 Psest_2026 Uncharacterized conserved protein 0.55 Psest_0182 glycine cleavage system H protein low > 67
Pseudomonas fluorescens SBW25 0.51 PFLU_RS18555 ATP-dependent Clp protease adapter ClpS 0.59 PFLU_RS28910 glycine cleavage system protein GcvH low > 109
Enterobacter sp. TBS_079 0.51 MPMX20_01543 ATP-dependent Clp protease adapter protein ClpS 0.56 MPMX20_03763 Glycine cleavage system H protein low > 85
Serratia liquefaciens MT49 0.51 IAI46_08510 ATP-dependent Clp protease adapter ClpS 0.53 IAI46_20855 glycine cleavage system protein GcvH low > 86
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS18555 ATP-dependent Clp protease adapter ClpS 0.59 PFLU_RS28910 glycine cleavage system protein GcvH low > 109
Enterobacter asburiae PDN3 0.51 EX28DRAFT_2051 Uncharacterized conserved protein 0.57 EX28DRAFT_2956 glycine cleavage system H protein low > 76
Erwinia tracheiphila SCR3 0.50 LU632_RS09700 clpS ATP-dependent Clp protease adapter ClpS 0.54 LU632_RS05910 gcvH glycine cleavage system protein GcvH low > 74
Shewanella sp. ANA-3 0.50 Shewana3_1752 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) 0.55 Shewana3_3500 glycine cleavage system protein H (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.50 TX73_016275 ATP-dependent Clp protease adapter ClpS 0.39 TX73_019930 glycine cleavage system protein GcvH low > 86
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS00425 ATP-dependent Clp protease adapter ClpS 0.44 LRK54_RS05505 glycine cleavage system protein GcvH low > 59
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_06885 clpS ATP-dependent Clp protease adapter ClpS 0.50 OKGIIK_01310 gcvH glycine cleavage system protein GcvH low > 52
Rhodanobacter denitrificans MT42 0.50 LRK55_RS00165 ATP-dependent Clp protease adapter ClpS 0.44 LRK55_RS05275 glycine cleavage system protein GcvH 0.55 53
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS02195 ATP-dependent Clp protease adapter ClpS 0.51 ABZR86_RS18880 glycine cleavage system protein GcvH low > 74
Azospirillum brasilense Sp245 0.50 AZOBR_RS05180 Clp protease ClpS 0.45 AZOBR_RS10465 glycine cleavage system protein H — —
Shewanella oneidensis MR-1 0.50 SO2627 conserved hypothetical protein (NCBI ptt file) 0.55 SO0780 gcvH glycine cleavage system H protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.50 Sama_2057 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) 0.57 Sama_2720 glycine cleavage system protein H (RefSeq) low > 62
Pseudomonas sp. S08-1 0.49 OH686_00230 ATP-dependent Clp protease adaptor protein ClpS 0.57 OH686_11170 glycine cleavage system H protein low > 80
Phaeobacter inhibens DSM 17395 0.46 PGA1_c30000 ATP-dependent Clp protease adaptor protein ClpS 0.48 PGA1_c05560 glycine cleavage system protein GcvH low > 62
Desulfovibrio vulgaris Miyazaki F 0.44 DvMF_0459 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) 0.40 DvMF_0225 glycine cleavage system protein H (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.43 DVU1601 ATP-dependent Clp protease adaptor protein ClpS (TIGR) 0.45 DVU1426 gcvH glycine cleavage system H protein (TIGR) low > 55
Phocaeicola vulgatus CL09T03C04 0.37 HMPREF1058_RS09035 ATP-dependent Clp protease adaptor ClpS 0.45 HMPREF1058_RS12495 glycine cleavage system protein GcvH low > 67
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS03340 ATP-dependent Clp protease adaptor ClpS 0.45 ABI39_RS04240 glycine cleavage system protein GcvH low > 72

Not shown: 1 genomes with orthologs for QEN71_RS03000 only; 27 genomes with orthologs for QEN71_RS29210 only