Conservation of cofitness between QEN71_RS26640 and QEN71_RS28985 in Paraburkholderia sabiae LMG 24235

78 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS26640 tRNA guanosine(34) transglycosylase Tgt 1.0 QEN71_RS28985 chemotaxis response regulator protein-glutamate methylesterase 0.86 1
Burkholderia phytofirmans PsJN 0.92 BPHYT_RS03410 queuine tRNA-ribosyltransferase 0.87 BPHYT_RS18970 chemotaxis protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.89 H281DRAFT_04670 tRNA-guanine transglycosylase 0.87 H281DRAFT_05747 two-component system, chemotaxis family, response regulator CheB low > 103
Cupriavidus basilensis FW507-4G11 0.79 RR42_RS17400 queuine tRNA-ribosyltransferase 0.78 RR42_RS35785 chemotaxis protein low > 128
Herbaspirillum seropedicae SmR1 0.75 HSERO_RS06175 queuine tRNA-ribosyltransferase 0.68 HSERO_RS10125 chemotaxis protein low > 78
Ralstonia sp. UNC404CL21Col 0.74 ABZR87_RS01280 tRNA guanosine(34) transglycosylase Tgt 0.66 ABZR87_RS17990 chemotaxis response regulator protein-glutamate methylesterase low > 80
Ralstonia solanacearum IBSBF1503 0.72 RALBFv3_RS05685 tRNA guanosine(34) transglycosylase Tgt 0.65 RALBFv3_RS17415 chemotaxis response regulator protein-glutamate methylesterase low > 76
Ralstonia solanacearum UW163 0.72 UW163_RS07940 tRNA guanosine(34) transglycosylase Tgt 0.65 UW163_RS21735 chemotaxis response regulator protein-glutamate methylesterase — —
Ralstonia solanacearum GMI1000 0.72 RS_RS13575 tRNA guanosine(34) transglycosylase Tgt 0.66 RS_RS23895 chemotaxis response regulator protein-glutamate methylesterase low > 80
Ralstonia solanacearum PSI07 0.71 RPSI07_RS11615 tRNA guanosine(34) transglycosylase Tgt 0.64 RPSI07_RS06230 chemotaxis response regulator protein-glutamate methylesterase low > 81
Castellaniella sp019104865 MT123 0.68 ABCV34_RS15365 tRNA guanosine(34) transglycosylase Tgt 0.68 ABCV34_RS05815 chemotaxis response regulator protein-glutamate methylesterase low > 48
Dechlorosoma suillum PS 0.66 Dsui_3323 tRNA-guanine transglycosylase, queuosine-34-forming 0.54 Dsui_1713 chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain low > 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF2798 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.62 GFF1479 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 90
Acidovorax sp. GW101-3H11 0.64 Ac3H11_861 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.61 Ac3H11_1425 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 79
Variovorax sp. SCN45 0.63 GFF5534 Queuine tRNA-ribosyltransferase (EC 2.4.2.29) 0.76 GFF5767 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 127
Shewanella sp. ANA-3 0.61 Shewana3_1435 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.45 Shewana3_2213 response regulator receiver modulated CheB methylesterase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.61 Sama_2193 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.47 Sama_3499 protein-glutamate methylesterase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.61 SO3113 tgt queuine tRNA-ribosyltransferase (NCBI ptt file) 0.46 SO2327 cheB-2 protein-glutamate methylesterase CheB (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_03850 tRNA guanosine(34) transglycosylase Tgt 0.43 CSW01_19520 chemotaxis response regulator protein-glutamate methylesterase low > 62
Shewanella loihica PV-4 0.61 Shew_2337 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.47 Shew_0109 response regulator receiver modulated CheB methylesterase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.60 MIT1002_02813 Queuine tRNA-ribosyltransferase 0.32 MIT1002_01107 Chemotaxis response regulator protein-glutamate methylesterase of group 1 operon low > 70
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4305 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.67 GFF1664 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 78
Enterobacter sp. TBS_079 0.59 MPMX20_00997 Queuine tRNA-ribosyltransferase 0.69 MPMX20_02787 Protein-glutamate methylesterase/protein-glutamine glutaminase low > 85
Enterobacter asburiae PDN3 0.59 EX28DRAFT_2565 tRNA-guanine transglycosylase 0.69 EX28DRAFT_0673 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain low > 76
Dickeya dianthicola 67-19 0.59 HGI48_RS05530 tRNA guanosine(34) transglycosylase Tgt 0.71 HGI48_RS13570 chemotaxis response regulator protein-glutamate methylesterase low > 71
Dickeya dianthicola ME23 0.59 DZA65_RS05855 tRNA guanosine(34) transglycosylase Tgt 0.71 DZA65_RS14055 chemotaxis response regulator protein-glutamate methylesterase 0.58 63
Dickeya dadantii 3937 0.59 DDA3937_RS05470 tRNA guanosine(34) transglycosylase Tgt 0.71 DDA3937_RS13525 chemotaxis response regulator protein-glutamate methylesterase low > 74
Escherichia coli ECRC98 0.59 JDDGAC_12160 tgt tRNA guanosine(34) transglycosylase Tgt 0.68 JDDGAC_00725 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 86
Escherichia coli BL21 0.59 ECD_00354 tRNA-guanine transglycosylase 0.68 ECD_01854 fused chemotaxis regulator: protein-glutamate methylesterase in two-component regulatory system with CheA low > 61
Escherichia coli ECRC99 0.59 KEDOAH_19460 tgt tRNA guanosine(34) transglycosylase Tgt 0.68 KEDOAH_01955 cheB protein-glutamate methylesterase/protein glutamine deamidase — —
Escherichia coli ECOR38 0.59 HEPCGN_07145 tgt tRNA guanosine(34) transglycosylase Tgt 0.68 HEPCGN_04570 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 87
Escherichia fergusonii Becca 0.59 EFB2_03651 Queuine tRNA-ribosyltransferase 0.68 EFB2_02060 Protein-glutamate methylesterase/protein-glutamine glutaminase low > 86
Escherichia coli Nissle 1917 0.59 ECOLIN_RS02445 tRNA guanosine(34) transglycosylase Tgt 0.68 ECOLIN_RS10755 protein-glutamate methylesterase/protein glutamine deamidase — —
Escherichia coli ECRC62 0.59 BNILDI_22855 tgt tRNA guanosine(34) transglycosylase Tgt 0.68 BNILDI_15380 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 75
Escherichia coli ECRC101 0.59 MCAODC_27730 tgt tRNA guanosine(34) transglycosylase Tgt 0.68 MCAODC_19255 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 87
Escherichia coli ECRC100 0.59 OKFHMN_08505 tgt tRNA guanosine(34) transglycosylase Tgt 0.68 OKFHMN_26150 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 80
Escherichia coli BW25113 0.59 b0406 tgt queuine tRNA-ribosyltransferase (NCBI) 0.68 b1883 cheB chemotaxis-specific methylesterase (NCBI) low > 76
Escherichia coli ECRC102 0.59 NIAGMN_06560 tgt tRNA guanosine(34) transglycosylase Tgt 0.68 NIAGMN_01910 cheB protein-glutamate methylesterase/protein glutamine deamidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_03270 Queuine tRNA-ribosyltransferase 0.68 OHPLBJKB_01845 Chemotaxis response regulator protein-glutamate methylesterase low > 73
Escherichia coli ECOR27 0.59 NOLOHH_01440 tgt tRNA guanosine(34) transglycosylase Tgt 0.68 NOLOHH_16590 cheB protein-glutamate methylesterase/protein glutamine deamidase low > 75
Pantoea sp. MT58 0.59 IAI47_14805 tRNA guanosine(34) transglycosylase Tgt 0.69 IAI47_08330 chemotaxis response regulator protein-glutamate methylesterase low > 76
Rahnella sp. WP5 0.59 EX31_RS22095 tRNA guanosine(34) transglycosylase Tgt 0.70 EX31_RS11360 chemotaxis response regulator protein-glutamate methylesterase low > 89
Pectobacterium carotovorum WPP14 0.58 HER17_RS15990 tRNA guanosine(34) transglycosylase Tgt 0.71 HER17_RS08120 chemotaxis response regulator protein-glutamate methylesterase 0.77 4
Erwinia tracheiphila SCR3 0.58 LU632_RS18500 tgt tRNA guanosine(34) transglycosylase Tgt 0.68 LU632_RS13525 chemotaxis response regulator protein-glutamate methylesterase low > 74
Serratia liquefaciens MT49 0.58 IAI46_04840 tRNA guanosine(34) transglycosylase Tgt 0.70 IAI46_16015 chemotaxis response regulator protein-glutamate methylesterase low > 86
Pseudomonas sp. S08-1 0.57 OH686_17430 tRNA-guanine transglycosylase 0.45 OH686_21840 Chemotaxis response regulator protein-glutamate methylesterase CheB low > 80
Pseudomonas stutzeri RCH2 0.57 Psest_1242 tRNA-guanine transglycosylase, queuosine-34-forming 0.47 Psest_0653 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain — —
Pseudomonas sp. RS175 0.57 PFR28_00277 Queuine tRNA-ribosyltransferase 0.46 PFR28_02517 Protein-glutamate methylesterase/protein-glutamine glutaminase low > 88
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_06690 queuine tRNA-ribosyltransferase 0.47 AO356_22645 chemotaxis protein CheY low > 104
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_3198 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.47 Pf6N2E2_413 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 103
Pseudomonas putida KT2440 0.56 PP_0833 queuine tRNA-ribosyltransferase 0.30 PP_4337 chemotaxis response regulator protein-glutamate methylesterase of group 1 operon low > 96
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1228 tRNA-guanine transglycosylase 0.48 Psyr_0781 Protein-glutamate methylesterase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1228 tRNA-guanine transglycosylase 0.48 Psyr_0781 Protein-glutamate methylesterase — —
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_4882 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.30 PfGW456L13_4327 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 87
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt 0.47 PFLU_RS24965 chemotaxis response regulator protein-glutamate methylesterase low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt 0.47 PFLU_RS24965 chemotaxis response regulator protein-glutamate methylesterase low > 109
Pseudomonas simiae WCS417 0.55 PS417_23245 queuine tRNA-ribosyltransferase 0.30 PS417_19675 chemotaxis protein CheY — —
Lysobacter sp. OAE881 0.55 ABIE51_RS15020 tRNA guanosine(34) transglycosylase Tgt 0.51 ABIE51_RS16960 chemotaxis response regulator protein-glutamate methylesterase low > 62
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS03130 tRNA guanosine(34) transglycosylase Tgt 0.47 LRK54_RS13670 chemotaxis response regulator protein-glutamate methylesterase low > 59
Rhodanobacter denitrificans MT42 0.55 LRK55_RS02880 tRNA guanosine(34) transglycosylase Tgt 0.47 LRK55_RS13410 chemotaxis response regulator protein-glutamate methylesterase low > 63
Dyella japonica UNC79MFTsu3.2 0.54 ABZR86_RS09540 tRNA guanosine(34) transglycosylase Tgt 0.48 ABZR86_RS22205 chemotaxis response regulator protein-glutamate methylesterase low > 74
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_10000 tgt tRNA guanosine(34) transglycosylase Tgt 0.45 OKGIIK_02915 cheB Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains low > 52
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.2168.1 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.50 Xcc-8004.2888.1 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) low > 74
Rhodospirillum rubrum S1H 0.49 Rru_A0280 Queuine tRNA-ribosyltransferase (NCBI) 0.50 Rru_A1406 Two component CheB methylesterase (NCBI) low > 58
Azospirillum brasilense Sp245 0.49 AZOBR_RS06295 queuine tRNA-ribosyltransferase 0.44 AZOBR_RS14260 chemotaxis protein low > 97
Azospirillum sp. SherDot2 0.48 MPMX19_01697 Queuine tRNA-ribosyltransferase 0.47 MPMX19_06748 Protein-glutamate methylesterase/protein-glutamine glutaminase of group 3 operon low > 112
Desulfovibrio vulgaris Hildenborough JW710 0.47 DVU0726 tgt queuine tRNA-ribosyltransferase (TIGR) 0.47 DVU1596 cheB-1 protein-glutamate methylesterase CheB (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.47 DvMF_2757 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.45 DvMF_0465 response regulator receiver modulated CheB methylesterase (RefSeq) low > 51
Magnetospirillum magneticum AMB-1 0.46 AMB_RS03090 tRNA guanosine(34) transglycosylase Tgt 0.27 AMB_RS01635 chemotaxis response regulator protein-glutamate methylesterase low > 64
Rhodopseudomonas palustris CGA009 0.44 TX73_013485 tRNA guanosine(34) transglycosylase Tgt 0.49 TX73_000705 chemotaxis response regulator protein-glutamate methylesterase low > 86
Sinorhizobium meliloti 1021 0.44 SMc01206 queuine tRNA-ribosyltransferase 0.43 SMc03010 chemotaxis-specific methylesterase low > 103
Agrobacterium fabrum C58 0.43 Atu1677 queuine tRNA-ribosyltransferase 0.43 Atu0519 protein-glutamate methylesterase low > 89
Rhizobium sp. OAE497 0.43 ABIE40_RS09435 tRNA guanosine(34) transglycosylase Tgt 0.49 ABIE40_RS15975 chemotaxis response regulator protein-glutamate methylesterase low > 107
Bosea sp. OAE506 0.43 ABIE41_RS18290 tRNA guanosine(34) transglycosylase Tgt 0.46 ABIE41_RS01665 chemotaxis response regulator protein-glutamate methylesterase low > 77
Sphingomonas koreensis DSMZ 15582 0.43 Ga0059261_1017 tRNA-guanine transglycosylase 0.49 Ga0059261_1084 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain low > 68
Pontibacter actiniarum KMM 6156, DSM 19842 0.42 CA264_00655 tRNA-guanine(34) transglycosylase 0.23 CA264_07600 chemotaxis response regulator protein-glutamate methylesterase low > 74
Caulobacter crescentus NA1000 0.40 CCNA_01659 queuine tRNA-ribosyltransferase 0.44 CCNA_00445 receiver domain-glutamate methylesterase cheBI low > 66
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_01659 queuine tRNA-ribosyltransferase 0.44 CCNA_00445 receiver domain-glutamate methylesterase cheBI low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.39 A4249_RS02905 tRNA guanosine(34) transglycosylase Tgt 0.41 A4249_RS15580 chemotaxis response regulator protein-glutamate methylesterase low > 48

Not shown: 21 genomes with orthologs for QEN71_RS26640 only; 3 genomes with orthologs for QEN71_RS28985 only