Conservation of cofitness between QEN71_RS03060 and QEN71_RS04085 in Paraburkholderia sabiae LMG 24235

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS03060 quinolinate synthase NadA 1.0 QEN71_RS04085 3-phosphoshikimate 1-carboxyvinyltransferase 0.75 11
Burkholderia phytofirmans PsJN 0.91 BPHYT_RS15650 quinolinate synthetase 0.90 BPHYT_RS14895 3-phosphoshikimate 1-carboxyvinyltransferase 0.43 39
Paraburkholderia graminis OAS925 0.90 ABIE53_003294 quinolinate synthase 0.88 ABIE53_003154 3-phosphoshikimate 1-carboxyvinyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.90 H281DRAFT_04071 quinolinate synthetase 0.91 H281DRAFT_03922 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia sp. UNC404CL21Col 0.76 ABZR87_RS00355 quinolinate synthase NadA 0.71 ABZR87_RS09465 3-phosphoshikimate 1-carboxyvinyltransferase low > 80
Herbaspirillum seropedicae SmR1 0.76 HSERO_RS11065 quinolinate synthetase 0.63 HSERO_RS18420 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum GMI1000 0.75 RS_RS12295 quinolinate synthase 0.70 RS_RS04510 3-phosphoshikimate 1-carboxyvinyltransferase low > 80
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS17020 quinolinate synthetase 0.68 RR42_RS04475 3-phosphoshikimate 1-carboxyvinyltransferase low > 128
Ralstonia solanacearum PSI07 0.75 RPSI07_RS12650 quinolinate synthase NadA 0.69 RPSI07_RS19695 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum UW163 0.75 UW163_RS08935 quinolinate synthase NadA 0.69 UW163_RS16035 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum IBSBF1503 0.75 RALBFv3_RS04735 quinolinate synthase NadA 0.69 RALBFv3_RS13775 3-phosphoshikimate 1-carboxyvinyltransferase low > 76
Shewanella amazonensis SB2B 0.61 Sama_1712 quinolinate synthetase (RefSeq) 0.56 Sama_1734 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) — —
Shewanella loihica PV-4 0.60 Shew_1928 quinolinate synthetase (RefSeq) 0.55 Shew_1952 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.59 SO2342 nadA quinolinate synthetase complex, subunit A (NCBI ptt file) 0.55 SO2404 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.59 Shewana3_2128 quinolinate synthetase (RefSeq) 0.55 Shewana3_1975 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) — —
Pectobacterium carotovorum WPP14 0.59 HER17_RS14820 quinolinate synthase NadA 0.51 HER17_RS12285 3-phosphoshikimate 1-carboxyvinyltransferase 0.85 69
Serratia liquefaciens MT49 0.58 IAI46_06380 quinolinate synthase NadA 0.54 IAI46_08640 3-phosphoshikimate 1-carboxyvinyltransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF4 Quinolinate synthetase (EC 2.5.1.72) 0.54 GFF3665 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) — —
Alteromonas macleodii MIT1002 0.58 MIT1002_01344 Quinolinate synthase A 0.53 MIT1002_02191 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli Nissle 1917 0.58 ECOLIN_RS03990 quinolinate synthase NadA 0.54 ECOLIN_RS04810 3-phosphoshikimate 1-carboxyvinyltransferase 0.53 31
Escherichia coli ECRC98 0.58 JDDGAC_10415 nadA quinolinate synthase NadA 0.54 JDDGAC_09095 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 86
Escherichia coli ECRC100 0.58 OKFHMN_06760 nadA quinolinate synthase NadA 0.54 OKFHMN_05485 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 80
Escherichia coli ECRC102 0.58 NIAGMN_04810 nadA quinolinate synthase NadA 0.54 NIAGMN_03205 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dickeya dianthicola 67-19 0.58 HGI48_RS06595 quinolinate synthase NadA 0.52 HGI48_RS09685 3-phosphoshikimate 1-carboxyvinyltransferase — —
Enterobacter asburiae PDN3 0.58 EX28DRAFT_2245 quinolinate synthetase (EC 2.5.1.72) 0.55 EX28DRAFT_2027 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) low > 76
Dickeya dadantii 3937 0.58 DDA3937_RS06545 quinolinate synthase NadA 0.52 DDA3937_RS09675 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECRC101 0.58 MCAODC_25980 nadA quinolinate synthase NadA 0.54 MCAODC_24875 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 87
Escherichia coli ECRC99 0.58 KEDOAH_21205 nadA quinolinate synthase NadA 0.54 KEDOAH_22250 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia fergusonii Becca 0.58 EFB2_03356 Quinolinate synthase A 0.54 EFB2_03156 3-phosphoshikimate 1-carboxyvinyltransferase low > 86
Dickeya dianthicola ME23 0.58 DZA65_RS06945 quinolinate synthase NadA 0.52 DZA65_RS09995 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECRC62 0.58 BNILDI_21185 nadA quinolinate synthase NadA 0.54 BNILDI_20300 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 75
Escherichia coli ECOR27 0.58 NOLOHH_23190 nadA quinolinate synthase NadA 0.54 NOLOHH_22045 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 75
Enterobacter sp. TBS_079 0.58 MPMX20_01377 Quinolinate synthase A 0.55 MPMX20_01567 3-phosphoshikimate 1-carboxyvinyltransferase 0.52 51
Escherichia coli ECOR38 0.58 HEPCGN_01515 nadA quinolinate synthase NadA 0.54 HEPCGN_23035 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.68 45
Escherichia coli BL21 0.58 ECD_00703 quinolinate synthase, subunit A 0.54 ECD_00912 5-enolpyruvylshikimate-3-phosphate synthetase low > 61
Escherichia coli BW25113 0.58 b0750 nadA quinolinate synthetase (NCBI) 0.54 b0908 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) 0.62 40
Klebsiella michiganensis M5al 0.57 BWI76_RS08580 quinolinate synthetase 0.54 BWI76_RS09760 3-phosphoshikimate 1-carboxyvinyltransferase low > 92
Pseudomonas simiae WCS417 0.57 PS417_22385 quinolinate synthase A 0.22 PS417_12855 3-phosphoshikimate 1-carboxyvinyltransferase 0.47 35
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_1542 quinolinate synthetase 0.26 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_1542 quinolinate synthetase 0.26 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pantoea sp. MT58 0.57 IAI47_13635 quinolinate synthase NadA 0.53 IAI47_12860 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS24025 quinolinate synthase NadA 0.22 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase low > 109
Pseudomonas fluorescens SBW25 0.57 PFLU_RS24025 quinolinate synthase NadA 0.22 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase low > 109
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_02963 Quinolinate synthase A 0.54 OHPLBJKB_02760 3-phosphoshikimate 1-carboxyvinyltransferase low > 73
Rahnella sp. WP5 0.56 EX31_RS23525 quinolinate synthase NadA 0.54 EX31_RS18250 3-phosphoshikimate 1-carboxyvinyltransferase — —
Kangiella aquimarina DSM 16071 0.56 B158DRAFT_2453 quinolinate synthetase (EC 2.5.1.72) 0.20 B158DRAFT_2432 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) — —
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_09180 quinolinate synthase 0.56 CSW01_08705 3-phosphoshikimate 1-carboxyvinyltransferase low > 62
Bacteroides thetaiotaomicron VPI-5482 0.35 BT3164 quinolinate synthetase A (NCBI ptt file) 0.27 BT2186 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (from data) — —
Phocaeicola vulgatus CL09T03C04 0.35 HMPREF1058_RS11230 quinolinate synthase NadA 0.26 HMPREF1058_RS13970 3-phosphoshikimate 1-carboxyvinyltransferase — —
Phocaeicola dorei CL03T12C01 0.35 ABI39_RS05755 quinolinate synthase NadA 0.26 ABI39_RS09575 3-phosphoshikimate 1-carboxyvinyltransferase — —
Bacteroides ovatus ATCC 8483 0.35 BACOVA_02839 quinolinate synthetase complex, A subunit 0.27 BACOVA_03157 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS21180 quinolinate synthase 0.23 CA265_RS11640 3-phosphoshikimate 1-carboxyvinyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.34 Ga0059261_0051 quinolinate synthetase (EC 2.5.1.72) 0.15 Ga0059261_0167 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) — —
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS06555 quinolinate synthase NadA 0.26 HMPREF1078_RS05635 3-phosphoshikimate 1-carboxyvinyltransferase — —
Magnetospirillum magneticum AMB-1 0.34 AMB_RS19660 quinolinate synthase NadA 0.15 AMB_RS21555 3-phosphoshikimate 1-carboxyvinyltransferase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.34 ABZR88_RS20650 quinolinate synthase NadA 0.24 ABZR88_RS07000 3-phosphoshikimate 1-carboxyvinyltransferase — —
Bacteroides stercoris CC31F 0.33 HMPREF1181_RS01920 quinolinate synthase NadA 0.25 HMPREF1181_RS09330 3-phosphoshikimate 1-carboxyvinyltransferase — —
Synechococcus elongatus PCC 7942 0.32 Synpcc7942_1448 nadA quinolinate synthetase 0.16 Synpcc7942_0232 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Fusobacterium nucleatum SB010 0.24 HUW76_10740 quinolinate synthase NadA 0.19 HUW76_05445 3-phosphoshikimate 1-carboxyvinyltransferase low > 35
Mycobacterium tuberculosis H37Rv 0.23 Rv1594 Probable quinolinate synthetase NadA 0.17 Rv3227 3-phosphoshikimate 1-carboxyvinyltransferase AroA (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) — —
Rhizobium sp. OAE497 0.23 ABIE40_RS23255 quinolinate synthase NadA 0.25 ABIE40_RS05420 3-phosphoshikimate 1-carboxyvinyltransferase — —
Azospirillum brasilense Sp245 0.22 AZOBR_RS18690 quinolinate synthetase 0.13 AZOBR_RS03090 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodospirillum rubrum S1H 0.22 Rru_A1434 Quinolinate synthetase A (NCBI) 0.12 Rru_A0295 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) — —
Azospirillum sp. SherDot2 0.22 MPMX19_05670 Quinolinate synthase A 0.12 MPMX19_02233 3-phosphoshikimate 1-carboxyvinyltransferase — —
Agrobacterium fabrum C58 0.22 Atu4098 quinolinate synthetase 0.23 Atu0642 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS13900 quinolinate synthase NadA 0.16 LRK54_RS00390 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodanobacter denitrificans MT42 0.22 LRK55_RS13615 quinolinate synthase NadA 0.18 LRK55_RS00130 3-phosphoshikimate 1-carboxyvinyltransferase low > 63
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_00930 nadA quinolinate synthase NadA 0.18 OKGIIK_06920 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.21 A4249_RS00620 quinolinate synthase NadA 0.15 A4249_RS10920 3-phosphoshikimate 1-carboxyvinyltransferase — —
Sinorhizobium meliloti 1021 0.21 SMc02601 quinolinate synthetase 0.17 SMc00333 3-phosphoshikimate 1-carboxyvinyltransferase — —
Phaeobacter inhibens DSM 17395 0.21 PGA1_c27790 quinolinate synthetase A 0.13 PGA1_c04810 3-phosphoshikimate 1-carboxyvinyltransferase AroA — —
Methanococcus maripaludis S2 0.20 MMP_RS06390 quinolinate synthase NadA 0.24 MMP_RS06205 3-phosphoshikimate 1-carboxyvinyltransferase — —
Methanococcus maripaludis JJ 0.20 MMJJ_RS07960 quinolinate synthase NadA 0.25 MMJJ_RS08145 3-phosphoshikimate 1-carboxyvinyltransferase — —
Bifidobacterium breve UCC2003 0.17 BBR_RS16730 quinolinate synthase NadA 0.17 BBR_RS14370 3-phosphoshikimate 1-carboxyvinyltransferase low > 34
Desulfovibrio vulgaris Miyazaki F 0.13 DvMF_0525 quinolinate synthetase (RefSeq) 0.30 DvMF_1748 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) — —

Not shown: 17 genomes with orthologs for QEN71_RS03060 only; 12 genomes with orthologs for QEN71_RS04085 only