Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_0025 | | shikimate dehydrogenase | 1.0 | Psyr_4609 | | anthranilate synthase, component I | 0.72 | 3 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_0025 | | shikimate dehydrogenase | 1.00 | Psyr_4609 | | anthranilate synthase, component I | 0.57 | 55 |
Pseudomonas simiae WCS417 | 0.83 | PS417_00125 | | shikimate dehydrogenase | 0.91 | PS417_25725 | | anthranilate synthase component I | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.83 | Pf1N1B4_1906 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.90 | Pf1N1B4_2545 | | Anthranilate synthase, aminase component (EC 4.1.3.27) | 0.52 | 39 |
Pseudomonas fluorescens GW456-L13 | 0.82 | PfGW456L13_644 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.89 | PfGW456L13_1217 | | Anthranilate synthase, aminase component (EC 4.1.3.27) | 0.73 | 49 |
Pseudomonas fluorescens FW300-N2E3 | 0.82 | AO353_10670 | | shikimate dehydrogenase | 0.91 | AO353_07230 | | anthranilate synthase | 0.73 | 23 |
Pseudomonas sp. RS175 | 0.81 | PFR28_04655 | | Shikimate dehydrogenase (NADP(+)) | 0.91 | PFR28_04047 | | Anthranilate synthase component 1 | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.81 | PFLU_RS00120 | | shikimate dehydrogenase | 0.92 | PFLU_RS27380 | | anthranilate synthase component I | — | — |
Pseudomonas fluorescens SBW25 | 0.81 | PFLU_RS00120 | | shikimate dehydrogenase | 0.92 | PFLU_RS27380 | | anthranilate synthase component I | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.81 | AO356_11315 | | shikimate dehydrogenase | 0.91 | AO356_14420 | | anthranilate synthase | 0.52 | 20 |
Pseudomonas fluorescens FW300-N2E2 | 0.81 | Pf6N2E2_4130 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.91 | Pf6N2E2_4822 | | Anthranilate synthase, aminase component (EC 4.1.3.27) | — | — |
Pseudomonas putida KT2440 | 0.77 | PP_0074 | | shikimate 5-dehydrogenase | 0.87 | PP_0417 | | Anthranilate synthase component 1 | — | — |
Pseudomonas sp. S08-1 | 0.75 | OH686_12485 | | Shikimate 5-dehydrogenase I alpha | 0.86 | OH686_15125 | | anthranilate synthase component I | low | > 80 |
Pseudomonas stutzeri RCH2 | 0.73 | Psest_0029 | | shikimate 5-dehydrogenase | 0.83 | Psest_3650 | | anthranilate synthase component I, non-proteobacterial lineages | — | — |
Dechlorosoma suillum PS | 0.56 | Dsui_0443 | | shikimate 5-dehydrogenase | 0.59 | Dsui_0219 | | anthranilate synthase component I | — | — |
Herbaspirillum seropedicae SmR1 | 0.55 | HSERO_RS01990 | | shikimate 5-dehydrogenase | 0.53 | HSERO_RS19435 | | anthranilate synthase subunit I | 0.80 | 3 |
Shewanella sp. ANA-3 | 0.53 | Shewana3_0043 | aroE | shikimate 5-dehydrogenase (RefSeq) | 0.25 | Shewana3_1520 | | anthranilate synthase component I (RefSeq) | 0.95 | 4 |
Marinobacter adhaerens HP15 | 0.52 | HP15_3750 | | shikimate dehydrogenase | 0.65 | HP15_3288 | | anthranilate synthase component I | — | — |
Shewanella loihica PV-4 | 0.51 | Shew_3727 | | shikimate 5-dehydrogenase (RefSeq) | 0.25 | Shew_2251 | | anthranilate synthase component I (RefSeq) | 0.86 | 5 |
Paraburkholderia sabiae LMG 24235 | 0.49 | QEN71_RS27130 | | shikimate dehydrogenase | 0.54 | QEN71_RS27550 | | anthranilate synthase component I | 0.84 | 1 |
Paraburkholderia graminis OAS925 | 0.48 | ABIE53_003560 | | shikimate dehydrogenase | 0.53 | ABIE53_003640 | | anthranilate synthase component 1 | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.48 | H281DRAFT_06291 | | shikimate dehydrogenase (EC 1.1.1.25) | 0.53 | H281DRAFT_05715 | | anthranilate synthase, component I | — | — |
Ralstonia solanacearum GMI1000 | 0.48 | RS_RS13890 | | shikimate dehydrogenase | 0.53 | RS_RS14430 | | anthranilate synthase component I | 0.50 | 26 |
Burkholderia phytofirmans PsJN | 0.48 | BPHYT_RS16975 | | shikimate 5-dehydrogenase | 0.53 | BPHYT_RS17390 | | anthranilate synthase subunit I | 0.75 | 6 |
Ralstonia solanacearum PSI07 | 0.48 | RPSI07_RS11300 | | shikimate dehydrogenase | 0.53 | RPSI07_RS10755 | | anthranilate synthase component I | — | — |
Ralstonia solanacearum IBSBF1503 | 0.48 | RALBFv3_RS05945 | | shikimate dehydrogenase | 0.53 | RALBFv3_RS06485 | | anthranilate synthase component I | low | > 76 |
Ralstonia solanacearum UW163 | 0.48 | UW163_RS07680 | | shikimate dehydrogenase | 0.53 | UW163_RS07140 | | anthranilate synthase component I | — | — |
Dickeya dianthicola ME23 | 0.47 | DZA65_RS20315 | | shikimate dehydrogenase | 0.26 | DZA65_RS10965 | | anthranilate synthase component 1 | — | — |
Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS01605 | | shikimate dehydrogenase | 0.52 | ABZR87_RS02140 | | anthranilate synthase component I | 0.64 | 14 |
Cupriavidus basilensis FW507-4G11 | 0.46 | RR42_RS17645 | | shikimate dehydrogenase | 0.54 | RR42_RS18295 | | anthranilate synthase component I | 0.80 | 17 |
Dickeya dianthicola 67-19 | 0.46 | HGI48_RS19190 | | shikimate dehydrogenase | 0.26 | HGI48_RS10485 | | anthranilate synthase component 1 | — | — |
Dickeya dadantii 3937 | 0.46 | DDA3937_RS19100 | | shikimate dehydrogenase | 0.25 | DDA3937_RS10485 | | anthranilate synthase component 1 | — | — |
Erwinia tracheiphila SCR3 | 0.44 | LU632_RS22445 | aroE | shikimate dehydrogenase | 0.25 | LU632_RS12755 | | anthranilate synthase component 1 | low | > 74 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.43 | GFF5226 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.53 | GFF3106 | | Anthranilate synthase, aminase component (EC 4.1.3.27) | 0.57 | 23 |
Castellaniella sp019104865 MT123 | 0.40 | ABCV34_RS11620 | | shikimate dehydrogenase | 0.51 | ABCV34_RS10280 | | anthranilate synthase component I | low | > 48 |
Acidovorax sp. GW101-3H11 | 0.39 | Ac3H11_4044 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.53 | Ac3H11_767 | | Anthranilate synthase, aminase component (EC 4.1.3.27) | 0.96 | 3 |
Variovorax sp. SCN45 | 0.37 | GFF4456 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.52 | GFF5896 | | Anthranilate synthase, aminase component (EC 4.1.3.27) | low | > 127 |
Acinetobacter radioresistens SK82 | 0.35 | MPMX26_02748 | | Shikimate dehydrogenase (NADP(+)) | 0.51 | MPMX26_00199 | | Anthranilate synthase component 1 | low | > 36 |
Xanthomonas campestris pv. campestris strain 8004 | 0.35 | Xcc-8004.5020.1 | | Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) | 0.59 | Xcc-8004.608.1 | | Anthranilate synthase, aminase component (EC 4.1.3.27) | 0.91 | 6 |
Variovorax sp. OAS795 | 0.34 | ABID97_RS06300 | | shikimate dehydrogenase | 0.52 | ABID97_RS05250 | | anthranilate synthase component I | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.34 | ABZR86_RS14985 | | shikimate dehydrogenase | 0.55 | ABZR86_RS12180 | | anthranilate synthase component I | 0.97 | 8 |
Rhodanobacter denitrificans MT42 | 0.33 | LRK55_RS08360 | | shikimate dehydrogenase | 0.57 | LRK55_RS11145 | | anthranilate synthase component I | low | > 63 |
Rhodanobacter denitrificans FW104-10B01 | 0.33 | LRK54_RS08595 | | shikimate dehydrogenase | 0.58 | LRK54_RS11415 | | anthranilate synthase component I | 0.79 | 3 |
Rhodanobacter sp. FW510-T8 | 0.32 | OKGIIK_15365 | aroE | shikimate dehydrogenase | 0.56 | OKGIIK_12405 | trpE | anthranilate synthase component I | low | > 52 |
Lysobacter sp. OAE881 | 0.31 | ABIE51_RS01815 | | shikimate dehydrogenase | 0.55 | ABIE51_RS04150 | | anthranilate synthase component I | 0.81 | 3 |
Dinoroseobacter shibae DFL-12 | 0.25 | Dshi_3450 | | shikimate 5-dehydrogenase (RefSeq) | 0.41 | Dshi_1796 | | anthranilate synthase component I (RefSeq) | — | — |
Phaeobacter inhibens DSM 17395 | 0.22 | PGA1_c35150 | | shikimate dehydrogenase AroE | 0.41 | PGA1_c16860 | | anthranilate synthase component 1 | — | — |
Methanococcus maripaludis S2 | 0.21 | MMP_RS04855 | | shikimate dehydrogenase | 0.27 | MMP_RS05205 | | anthranilate synthase component I | — | — |
Desulfovibrio vulgaris Hildenborough JW710 | 0.21 | DVU0115 | aroE | shikimate 5-dehydrogenase (TIGR) | 0.28 | DVU0465 | trpE | anthranilate synthase, component I (TIGR) | — | — |
Methanococcus maripaludis JJ | 0.21 | MMJJ_RS00280 | | shikimate dehydrogenase | 0.27 | MMJJ_RS09175 | | anthranilate synthase component I | — | — |
Azospirillum brasilense Sp245 | 0.20 | AZOBR_RS01765 | | shikimate 5-dehydrogenase | 0.40 | AZOBR_RS07490 | | anthranilate synthase subunit I | — | — |
Rhodospirillum rubrum S1H | 0.19 | Rru_A3613 | | Quinate/Shikimate 5-dehydrogenase (NCBI) | 0.41 | Rru_A1891 | | Anthranilate synthase component I (NCBI) | — | — |
Desulfovibrio vulgaris Miyazaki F | 0.19 | DvMF_1962 | | shikimate 5-dehydrogenase (RefSeq) | 0.30 | DvMF_1746 | | Anthranilate synthase (RefSeq) | — | — |
Bosea sp. OAE506 | 0.19 | ABIE41_RS04650 | | shikimate dehydrogenase | 0.38 | ABIE41_RS15730 | | anthranilate synthase component I | — | — |
Caulobacter crescentus NA1000 Δfur | 0.19 | CCNA_00003 | | shikimate 5-dehydrogenase | 0.37 | CCNA_01972 | | anthranilate synthase component I | low | > 67 |
Caulobacter crescentus NA1000 | 0.19 | CCNA_00003 | | shikimate dehydrogenase (EC 1.1.1.25) (from data) | 0.37 | CCNA_01972 | | anthranilate synthase component I | 0.93 | 8 |
Azospirillum sp. SherDot2 | 0.18 | MPMX19_02560 | | Shikimate dehydrogenase (NADP(+)) | 0.41 | MPMX19_00893 | | Anthranilate synthase component 1 | — | — |
Magnetospirillum magneticum AMB-1 | 0.18 | AMB_RS23010 | | shikimate dehydrogenase | 0.41 | AMB_RS09175 | | anthranilate synthase component I | — | — |
Sphingomonas koreensis DSMZ 15582 | 0.16 | Ga0059261_2194 | | shikimate dehydrogenase (EC 1.1.1.25) (from data) | 0.35 | Ga0059261_0256 | | anthranilate synthase component I, non-proteobacterial lineages | 0.94 | 3 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.15 | A4249_RS13660 | | shikimate dehydrogenase | 0.38 | A4249_RS06155 | | anthranilate synthase component I | — | — |
Pedobacter sp. GW460-11-11-14-LB5 | 0.13 | CA265_RS19745 | | shikimate dehydrogenase (EC 1.1.1.25) (from data) | 0.26 | CA265_RS22890 | | anthranilate synthase component I | — | — |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.12 | ABZR88_RS20055 | | shikimate dehydrogenase | 0.28 | ABZR88_RS16595 | | anthranilate synthase component I family protein | — | — |
Not shown: 30 genomes with orthologs for Psyr_0025 only; 11 genomes with orthologs for Psyr_4609 only