Conservation of cofitness between Psyr_0025 and Psyr_4609 in Pseudomonas syringae pv. syringae B728a

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0025 shikimate dehydrogenase 1.0 Psyr_4609 anthranilate synthase, component I 0.72 3
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0025 shikimate dehydrogenase 1.00 Psyr_4609 anthranilate synthase, component I 0.57 55
Pseudomonas simiae WCS417 0.83 PS417_00125 shikimate dehydrogenase 0.91 PS417_25725 anthranilate synthase component I
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_1906 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.90 Pf1N1B4_2545 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.52 39
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_644 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.89 PfGW456L13_1217 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.73 49
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_10670 shikimate dehydrogenase 0.91 AO353_07230 anthranilate synthase 0.73 23
Pseudomonas sp. RS175 0.81 PFR28_04655 Shikimate dehydrogenase (NADP(+)) 0.91 PFR28_04047 Anthranilate synthase component 1
Pseudomonas fluorescens SBW25-INTG 0.81 PFLU_RS00120 shikimate dehydrogenase 0.92 PFLU_RS27380 anthranilate synthase component I
Pseudomonas fluorescens SBW25 0.81 PFLU_RS00120 shikimate dehydrogenase 0.92 PFLU_RS27380 anthranilate synthase component I
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_11315 shikimate dehydrogenase 0.91 AO356_14420 anthranilate synthase 0.52 20
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_4130 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.91 Pf6N2E2_4822 Anthranilate synthase, aminase component (EC 4.1.3.27)
Pseudomonas putida KT2440 0.77 PP_0074 shikimate 5-dehydrogenase 0.87 PP_0417 Anthranilate synthase component 1
Pseudomonas sp. S08-1 0.75 OH686_12485 Shikimate 5-dehydrogenase I alpha 0.86 OH686_15125 anthranilate synthase component I low > 80
Pseudomonas stutzeri RCH2 0.73 Psest_0029 shikimate 5-dehydrogenase 0.83 Psest_3650 anthranilate synthase component I, non-proteobacterial lineages
Dechlorosoma suillum PS 0.56 Dsui_0443 shikimate 5-dehydrogenase 0.59 Dsui_0219 anthranilate synthase component I
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS01990 shikimate 5-dehydrogenase 0.53 HSERO_RS19435 anthranilate synthase subunit I 0.80 3
Shewanella sp. ANA-3 0.53 Shewana3_0043 aroE shikimate 5-dehydrogenase (RefSeq) 0.25 Shewana3_1520 anthranilate synthase component I (RefSeq) 0.95 4
Marinobacter adhaerens HP15 0.52 HP15_3750 shikimate dehydrogenase 0.65 HP15_3288 anthranilate synthase component I
Shewanella loihica PV-4 0.51 Shew_3727 shikimate 5-dehydrogenase (RefSeq) 0.25 Shew_2251 anthranilate synthase component I (RefSeq) 0.86 5
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS27130 shikimate dehydrogenase 0.54 QEN71_RS27550 anthranilate synthase component I 0.84 1
Paraburkholderia graminis OAS925 0.48 ABIE53_003560 shikimate dehydrogenase 0.53 ABIE53_003640 anthranilate synthase component 1
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_06291 shikimate dehydrogenase (EC 1.1.1.25) 0.53 H281DRAFT_05715 anthranilate synthase, component I
Ralstonia solanacearum GMI1000 0.48 RS_RS13890 shikimate dehydrogenase 0.53 RS_RS14430 anthranilate synthase component I 0.50 26
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS16975 shikimate 5-dehydrogenase 0.53 BPHYT_RS17390 anthranilate synthase subunit I 0.75 6
Ralstonia solanacearum PSI07 0.48 RPSI07_RS11300 shikimate dehydrogenase 0.53 RPSI07_RS10755 anthranilate synthase component I
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS05945 shikimate dehydrogenase 0.53 RALBFv3_RS06485 anthranilate synthase component I low > 76
Ralstonia solanacearum UW163 0.48 UW163_RS07680 shikimate dehydrogenase 0.53 UW163_RS07140 anthranilate synthase component I
Dickeya dianthicola ME23 0.47 DZA65_RS20315 shikimate dehydrogenase 0.26 DZA65_RS10965 anthranilate synthase component 1
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS01605 shikimate dehydrogenase 0.52 ABZR87_RS02140 anthranilate synthase component I 0.64 14
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS17645 shikimate dehydrogenase 0.54 RR42_RS18295 anthranilate synthase component I 0.80 17
Dickeya dianthicola 67-19 0.46 HGI48_RS19190 shikimate dehydrogenase 0.26 HGI48_RS10485 anthranilate synthase component 1
Dickeya dadantii 3937 0.46 DDA3937_RS19100 shikimate dehydrogenase 0.25 DDA3937_RS10485 anthranilate synthase component 1
Erwinia tracheiphila SCR3 0.44 LU632_RS22445 aroE shikimate dehydrogenase 0.25 LU632_RS12755 anthranilate synthase component 1 low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF5226 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.53 GFF3106 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.57 23
Castellaniella sp019104865 MT123 0.40 ABCV34_RS11620 shikimate dehydrogenase 0.51 ABCV34_RS10280 anthranilate synthase component I low > 48
Acidovorax sp. GW101-3H11 0.39 Ac3H11_4044 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.53 Ac3H11_767 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.96 3
Variovorax sp. SCN45 0.37 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.52 GFF5896 Anthranilate synthase, aminase component (EC 4.1.3.27) low > 127
Acinetobacter radioresistens SK82 0.35 MPMX26_02748 Shikimate dehydrogenase (NADP(+)) 0.51 MPMX26_00199 Anthranilate synthase component 1 low > 36
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.5020.1 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.59 Xcc-8004.608.1 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.91 6
Variovorax sp. OAS795 0.34 ABID97_RS06300 shikimate dehydrogenase 0.52 ABID97_RS05250 anthranilate synthase component I
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS14985 shikimate dehydrogenase 0.55 ABZR86_RS12180 anthranilate synthase component I 0.97 8
Rhodanobacter denitrificans MT42 0.33 LRK55_RS08360 shikimate dehydrogenase 0.57 LRK55_RS11145 anthranilate synthase component I low > 63
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS08595 shikimate dehydrogenase 0.58 LRK54_RS11415 anthranilate synthase component I 0.79 3
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_15365 aroE shikimate dehydrogenase 0.56 OKGIIK_12405 trpE anthranilate synthase component I low > 52
Lysobacter sp. OAE881 0.31 ABIE51_RS01815 shikimate dehydrogenase 0.55 ABIE51_RS04150 anthranilate synthase component I 0.81 3
Dinoroseobacter shibae DFL-12 0.25 Dshi_3450 shikimate 5-dehydrogenase (RefSeq) 0.41 Dshi_1796 anthranilate synthase component I (RefSeq)
Phaeobacter inhibens DSM 17395 0.22 PGA1_c35150 shikimate dehydrogenase AroE 0.41 PGA1_c16860 anthranilate synthase component 1
Methanococcus maripaludis S2 0.21 MMP_RS04855 shikimate dehydrogenase 0.27 MMP_RS05205 anthranilate synthase component I
Desulfovibrio vulgaris Hildenborough JW710 0.21 DVU0115 aroE shikimate 5-dehydrogenase (TIGR) 0.28 DVU0465 trpE anthranilate synthase, component I (TIGR)
Methanococcus maripaludis JJ 0.21 MMJJ_RS00280 shikimate dehydrogenase 0.27 MMJJ_RS09175 anthranilate synthase component I
Azospirillum brasilense Sp245 0.20 AZOBR_RS01765 shikimate 5-dehydrogenase 0.40 AZOBR_RS07490 anthranilate synthase subunit I
Rhodospirillum rubrum S1H 0.19 Rru_A3613 Quinate/Shikimate 5-dehydrogenase (NCBI) 0.41 Rru_A1891 Anthranilate synthase component I (NCBI)
Desulfovibrio vulgaris Miyazaki F 0.19 DvMF_1962 shikimate 5-dehydrogenase (RefSeq) 0.30 DvMF_1746 Anthranilate synthase (RefSeq)
Bosea sp. OAE506 0.19 ABIE41_RS04650 shikimate dehydrogenase 0.38 ABIE41_RS15730 anthranilate synthase component I
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_00003 shikimate 5-dehydrogenase 0.37 CCNA_01972 anthranilate synthase component I low > 67
Caulobacter crescentus NA1000 0.19 CCNA_00003 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.37 CCNA_01972 anthranilate synthase component I 0.93 8
Azospirillum sp. SherDot2 0.18 MPMX19_02560 Shikimate dehydrogenase (NADP(+)) 0.41 MPMX19_00893 Anthranilate synthase component 1
Magnetospirillum magneticum AMB-1 0.18 AMB_RS23010 shikimate dehydrogenase 0.41 AMB_RS09175 anthranilate synthase component I
Sphingomonas koreensis DSMZ 15582 0.16 Ga0059261_2194 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.35 Ga0059261_0256 anthranilate synthase component I, non-proteobacterial lineages 0.94 3
Brevundimonas sp. GW460-12-10-14-LB2 0.15 A4249_RS13660 shikimate dehydrogenase 0.38 A4249_RS06155 anthranilate synthase component I
Pedobacter sp. GW460-11-11-14-LB5 0.13 CA265_RS19745 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.26 CA265_RS22890 anthranilate synthase component I
Mucilaginibacter yixingensis YX-36 DSM 26809 0.12 ABZR88_RS20055 shikimate dehydrogenase 0.28 ABZR88_RS16595 anthranilate synthase component I family protein

Not shown: 30 genomes with orthologs for Psyr_0025 only; 11 genomes with orthologs for Psyr_4609 only