Conservation of cofitness between Psyr_4573 and Psyr_1542 in Pseudomonas syringae pv. syringae B728a

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4573 Histidine triad (HIT) protein 1.0 Psyr_1542 quinolinate synthetase 0.55 13
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4573 Histidine triad (HIT) protein 1.00 Psyr_1542 quinolinate synthetase low > 86
Pseudomonas sp. RS175 0.99 PFR28_04038 Purine nucleoside phosphoramidase 0.89 PFR28_03388 Quinolinate synthase A low > 88
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_4831 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) 0.89 Pf6N2E2_5553 Quinolinate synthetase (EC 2.5.1.72) low > 103
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_14465 zinc-binding protein 0.89 AO356_18145 quinolinate synthase A low > 104
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_07180 zinc-binding protein 0.90 AO353_03525 quinolinate synthase A low > 101
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_2554 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) 0.89 Pf1N1B4_626 Quinolinate synthetase (EC 2.5.1.72) low > 87
Pseudomonas fluorescens SBW25-INTG 0.94 PFLU_RS27340 histidine triad nucleotide-binding protein 0.89 PFLU_RS24025 quinolinate synthase NadA low > 109
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_1228 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) 0.89 PfGW456L13_1863 Quinolinate synthetase (EC 2.5.1.72) low > 87
Pseudomonas fluorescens SBW25 0.94 PFLU_RS27340 histidine triad nucleotide-binding protein 0.89 PFLU_RS24025 quinolinate synthase NadA low > 109
Pseudomonas putida KT2440 0.88 PP_0428 aminoacyl-adenylate hydrolase/purine nucleoside phosphoramidase 0.88 PP_1231 quinolinate synthase [4Fe-4S] cluster subunit 0.16 47
Pseudomonas simiae WCS417 0.88 PS417_25685 zinc-binding protein 0.90 PS417_22385 quinolinate synthase A low > 88
Pseudomonas stutzeri RCH2 0.78 Psest_3643 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.88 Psest_1509 quinolinate synthetase complex, A subunit low > 67
Pseudomonas sp. S08-1 0.78 OH686_15165 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) 0.91 OH686_19190 quinolinate synthetase complex, A subunit low > 80
Marinobacter adhaerens HP15 0.65 HP15_3384 HIT (histidine triad) family protein 0.75 HP15_2032 quinolinate synthetase complex, A subunit — —
Alteromonas macleodii MIT1002 0.64 MIT1002_00744 HIT-like protein 0.64 MIT1002_01344 Quinolinate synthase A — —
Synechococcus elongatus PCC 7942 0.61 Synpcc7942_1390 protein kinase C inhibitor 0.34 Synpcc7942_1448 nadA quinolinate synthetase low > 38
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_05660 hinT histidine triad nucleotide-binding protein 0.22 OKGIIK_00930 nadA quinolinate synthase NadA 0.55 7
Fusobacterium nucleatum SB010 0.56 HUW76_01775 histidine triad nucleotide-binding protein 0.24 HUW76_10740 quinolinate synthase NadA low > 35
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS01245 histidine triad nucleotide-binding protein 0.21 LRK54_RS13900 quinolinate synthase NadA low > 59
Rhodanobacter denitrificans MT42 0.54 LRK55_RS01015 histidine triad nucleotide-binding protein 0.21 LRK55_RS13615 quinolinate synthase NadA low > 63
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_09495 histidine triad nucleotide-binding protein 0.63 CSW01_09180 quinolinate synthase low > 62
Shewanella loihica PV-4 0.49 Shew_1731 histidine triad (HIT) protein (RefSeq) 0.64 Shew_1928 quinolinate synthetase (RefSeq) — —
Serratia liquefaciens MT49 0.49 IAI46_09880 purine nucleoside phosphoramidase 0.65 IAI46_06380 quinolinate synthase NadA low > 86
Shewanella amazonensis SB2B 0.49 Sama_1448 HIT family protein (RefSeq) 0.65 Sama_1712 quinolinate synthetase (RefSeq) — —
Shewanella oneidensis MR-1 0.49 SO2723 HIT family protein (NCBI ptt file) 0.65 SO2342 nadA quinolinate synthetase complex, subunit A (NCBI ptt file) — —
Shewanella sp. ANA-3 0.49 Shewana3_2507 histidine triad (HIT) protein (RefSeq) 0.64 Shewana3_2128 quinolinate synthetase (RefSeq) — —
Klebsiella michiganensis M5al 0.48 BWI76_RS11145 histidine triad nucleotide-binding protein 0.62 BWI76_RS08580 quinolinate synthetase — —
Pectobacterium carotovorum WPP14 0.48 HER17_RS08705 purine nucleoside phosphoramidase 0.67 HER17_RS14820 quinolinate synthase NadA low > 75
Variovorax sp. SCN45 0.47 GFF5361 FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.58 GFF2575 Quinolinate synthetase (EC 2.5.1.72) low > 127
Dickeya dianthicola 67-19 0.47 HGI48_RS13135 purine nucleoside phosphoramidase 0.64 HGI48_RS06595 quinolinate synthase NadA low > 71
Variovorax sp. OAS795 0.47 ABID97_RS23085 histidine triad nucleotide-binding protein 0.58 ABID97_RS07415 quinolinate synthase NadA low > 91
Dickeya dianthicola ME23 0.47 DZA65_RS13605 purine nucleoside phosphoramidase 0.64 DZA65_RS06945 quinolinate synthase NadA low > 75
Dickeya dadantii 3937 0.47 DDA3937_RS13070 purine nucleoside phosphoramidase 0.64 DDA3937_RS06545 quinolinate synthase NadA low > 74
Rahnella sp. WP5 0.47 EX31_RS24480 purine nucleoside phosphoramidase 0.63 EX31_RS23525 quinolinate synthase NadA low > 89
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_0741 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.63 B158DRAFT_2453 quinolinate synthetase (EC 2.5.1.72) — —
Pantoea sp. MT58 0.46 IAI47_12015 purine nucleoside phosphoramidase 0.65 IAI47_13635 quinolinate synthase NadA low > 76
Acidovorax sp. GW101-3H11 0.46 Ac3H11_4739 FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.61 Ac3H11_3837 Quinolinate synthetase (EC 2.5.1.72) low > 79
Enterobacter asburiae PDN3 0.46 EX28DRAFT_1827 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.63 EX28DRAFT_2245 quinolinate synthetase (EC 2.5.1.72) low > 76
Escherichia coli ECOR27 0.45 NOLOHH_21055 hinT purine nucleoside phosphoramidase 0.63 NOLOHH_23190 nadA quinolinate synthase NadA low > 75
Escherichia coli ECRC62 0.45 BNILDI_19215 hinT purine nucleoside phosphoramidase 0.63 BNILDI_21185 nadA quinolinate synthase NadA low > 75
Escherichia coli ECOR38 0.45 HEPCGN_23960 hinT purine nucleoside phosphoramidase 0.63 HEPCGN_01515 nadA quinolinate synthase NadA low > 87
Escherichia coli ECRC101 0.45 MCAODC_22885 hinT purine nucleoside phosphoramidase 0.63 MCAODC_25980 nadA quinolinate synthase NadA low > 87
Escherichia fergusonii Becca 0.45 EFB2_02872 Purine nucleoside phosphoramidase 0.64 EFB2_03356 Quinolinate synthase A low > 86
Escherichia coli ECRC98 0.45 JDDGAC_07185 hinT purine nucleoside phosphoramidase 0.63 JDDGAC_10415 nadA quinolinate synthase NadA — —
Escherichia coli BL21 0.45 ECD_01099 purine nucleoside phosphoramidase, dadA activator protein 0.63 ECD_00703 quinolinate synthase, subunit A — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF3386 YcfF/hinT protein: a purine nucleoside phosphoramidase 0.63 GFF4 Quinolinate synthetase (EC 2.5.1.72) — —
Escherichia coli ECRC102 0.45 NIAGMN_24305 hinT purine nucleoside phosphoramidase 0.63 NIAGMN_04810 nadA quinolinate synthase NadA — —
Escherichia coli BW25113 0.45 b1103 ycfF orf, hypothetical protein (VIMSS) 0.63 b0750 nadA quinolinate synthetase (NCBI) low > 76
Escherichia coli ECRC99 0.45 KEDOAH_24230 hinT purine nucleoside phosphoramidase 0.63 KEDOAH_21205 nadA quinolinate synthase NadA — —
Escherichia coli ECRC100 0.45 OKFHMN_03525 hinT purine nucleoside phosphoramidase 0.63 OKFHMN_06760 nadA quinolinate synthase NadA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_02563 Purine nucleoside phosphoramidase 0.63 OHPLBJKB_02963 Quinolinate synthase A — —
Enterobacter sp. TBS_079 0.45 MPMX20_01784 Purine nucleoside phosphoramidase 0.63 MPMX20_01377 Quinolinate synthase A low > 85
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS18865 hydrolase 0.60 RR42_RS17020 quinolinate synthetase low > 128
Escherichia coli Nissle 1917 0.44 ECOLIN_RS06370 purine nucleoside phosphoramidase 0.64 ECOLIN_RS03990 quinolinate synthase NadA — —
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS20300 HIT family hydrolase 0.63 HSERO_RS11065 quinolinate synthetase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF1304 FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.60 GFF1216 Quinolinate synthetase (EC 2.5.1.72) low > 90
Dechlorosoma suillum PS 0.43 Dsui_1421 HIT family hydrolase, diadenosine tetraphosphate hydrolase 0.14 Dsui_1043 quinolinate synthetase complex, A subunit — —
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS27815 histidine triad nucleotide-binding protein 0.61 QEN71_RS03060 quinolinate synthase NadA low > 153
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_05663 histidine triad (HIT) family protein 0.59 H281DRAFT_04071 quinolinate synthetase low > 103
Castellaniella sp019104865 MT123 0.41 ABCV34_RS11265 histidine triad nucleotide-binding protein 0.55 ABCV34_RS03700 quinolinate synthase NadA — —
Paraburkholderia graminis OAS925 0.41 ABIE53_003691 histidine triad (HIT) family protein 0.60 ABIE53_003294 quinolinate synthase low > 113
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS17660 HIT family hydrolase 0.60 BPHYT_RS15650 quinolinate synthetase low > 109
Rhodospirillum rubrum S1H 0.39 Rru_A3592 Histidine triad (HIT) protein (NCBI) 0.23 Rru_A1434 Quinolinate synthetase A (NCBI) — —
Magnetospirillum magneticum AMB-1 0.36 AMB_RS22915 histidine triad nucleotide-binding protein 0.34 AMB_RS19660 quinolinate synthase NadA — —
Bifidobacterium breve UCC2003 0.35 BBR_RS15155 histidine triad nucleotide-binding protein 0.15 BBR_RS16730 quinolinate synthase NadA low > 34
Azospirillum brasilense Sp245 0.33 AZOBR_RS01695 hypothetical protein 0.23 AZOBR_RS18690 quinolinate synthetase low > 97
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_1052 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.35 Ga0059261_0051 quinolinate synthetase (EC 2.5.1.72) — —
Azospirillum sp. SherDot2 0.32 MPMX19_02540 Purine nucleoside phosphoramidase 0.23 MPMX19_05670 Quinolinate synthase A low > 112
Phaeobacter inhibens DSM 17395 0.31 PGA1_c06720 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.23 PGA1_c27790 quinolinate synthetase A low > 62
Desulfovibrio vulgaris Miyazaki F 0.29 DvMF_1561 histidine triad (HIT) protein (RefSeq) 0.15 DvMF_0525 quinolinate synthetase (RefSeq) — —
Methanococcus maripaludis JJ 0.29 MMJJ_RS03610 HIT family protein 0.19 MMJJ_RS07960 quinolinate synthase NadA low > 28
Methanococcus maripaludis S2 0.29 MMP_RS01765 HIT family protein 0.19 MMP_RS06390 quinolinate synthase NadA — —

Not shown: 5 genomes with orthologs for Psyr_4573 only; 21 genomes with orthologs for Psyr_1542 only