Conservation of cofitness between Psyr_0039 and Psyr_1419 in Pseudomonas syringae pv. syringae B728a

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0039 luciferase 1.0 Psyr_1419 preQ(0) biosynthesis protein QueC 0.34 16
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0039 luciferase 1.00 Psyr_1419 preQ(0) biosynthesis protein QueC low > 86
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS00205 LLM class flavin-dependent oxidoreductase 0.90 PFLU_RS24040 7-cyano-7-deazaguanine synthase QueC low > 109
Pseudomonas fluorescens SBW25 0.87 PFLU_RS00205 LLM class flavin-dependent oxidoreductase 0.90 PFLU_RS24040 7-cyano-7-deazaguanine synthase QueC low > 109
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_4053 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 0.90 Pf6N2E2_5546 Queuosine Biosynthesis QueC ATPase low > 103
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_1836 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 0.87 Pf1N1B4_628 Queuosine Biosynthesis QueC ATPase low > 87
Pseudomonas simiae WCS417 0.86 PS417_00210 hypothetical protein 0.89 PS417_22400 7-cyano-7-deazaguanine synthase low > 88
Pseudomonas sp. RS175 0.86 PFR28_04710 hypothetical protein 0.89 PFR28_03403 7-cyano-7-deazaguanine synthase low > 88
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_10940 hypothetical protein 0.91 AO356_18070 7-cyano-7-deazaguanine synthase low > 104
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_571 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 0.85 PfGW456L13_1862 Queuosine Biosynthesis QueC ATPase low > 87
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_10735 hypothetical protein 0.89 AO353_03535 7-cyano-7-deazaguanine synthase low > 101
Pseudomonas putida KT2440 0.84 PP_0088 putative alkanal monooxygenase 0.88 PP_1226 pre-queuosine 0 synthase low > 96
Pseudomonas stutzeri RCH2 0.75 Psest_0077 luciferase family oxidoreductase, group 1 0.84 Psest_1506 queuosine biosynthesis protein QueC low > 67
Pseudomonas sp. S08-1 0.71 OH686_12400 Luciferase-like monooxygenase YhbW 0.82 OH686_19180 queuosine biosynthesis protein QueC low > 80
Acinetobacter radioresistens SK82 0.63 MPMX26_01171 hypothetical protein 0.60 MPMX26_02175 7-cyano-7-deazaguanine synthase — —
Shewanella sp. ANA-3 0.58 Shewana3_3090 luciferase family protein (RefSeq) 0.26 Shewana3_2164 queuosine biosynthesis protein QueC (RefSeq) low > 73
Acidovorax sp. GW101-3H11 0.58 Ac3H11_4052 Bacterial luciferase family protein 0.21 Ac3H11_4838 Queuosine Biosynthesis QueC ATPase low > 79
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS07630 alkane 1-monooxygenase 0.23 BPHYT_RS01500 7-cyano-7-deazaguanine synthase low > 109
Marinobacter adhaerens HP15 0.57 HP15_4079 flavin dependent oxidoreductase 0.32 HP15_3814 ExsB protein low > 73
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS23415 LLM class flavin-dependent oxidoreductase 0.23 QEN71_RS00200 7-cyano-7-deazaguanine synthase QueC low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.56 GFF4577 Bacterial luciferase family protein 0.19 GFF1402 Queuosine Biosynthesis QueC ATPase low > 90
Paraburkholderia graminis OAS925 0.55 ABIE53_001755 luciferase family oxidoreductase group 1 0.23 ABIE53_000396 7-cyano-7-deazaguanine synthase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_06466 luciferase family oxidoreductase, group 1 0.22 H281DRAFT_02232 preQ(0) biosynthesis protein QueC low > 103
Bosea sp. OAE506 0.55 ABIE41_RS08380 LLM class flavin-dependent oxidoreductase 0.26 ABIE41_RS11340 7-cyano-7-deazaguanine synthase QueC low > 77
Azospirillum brasilense Sp245 0.54 AZOBR_RS02685 alkane 1-monooxygenase 0.55 AZOBR_RS04150 7-cyano-7-deazaguanine synthase low > 97
Rahnella sp. WP5 0.54 EX31_RS08505 luciferase-like monooxygenase 0.29 EX31_RS22280 7-cyano-7-deazaguanine synthase QueC low > 89
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS21685 hypothetical protein 0.66 RR42_RS15445 7-cyano-7-deazaguanine synthase low > 128
Sinorhizobium meliloti 1021 0.54 SMc03968 oxidoreductase 0.30 SM_b20940 hypothetical protein low > 103
Dickeya dianthicola 67-19 0.53 HGI48_RS03280 luciferase-like monooxygenase 0.30 HGI48_RS05715 7-cyano-7-deazaguanine synthase QueC low > 71
Dickeya dadantii 3937 0.53 DDA3937_RS03105 LLM class flavin-dependent oxidoreductase 0.30 DDA3937_RS05670 7-cyano-7-deazaguanine synthase QueC low > 74
Variovorax sp. SCN45 0.53 GFF4914 Luciferase-like monooxygenase YhbW 0.24 GFF5214 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) low > 127
Dickeya dianthicola ME23 0.53 DZA65_RS03275 LLM class flavin-dependent oxidoreductase 0.30 DZA65_RS06040 7-cyano-7-deazaguanine synthase QueC low > 75
Dechlorosoma suillum PS 0.53 Dsui_1879 luciferase family oxidoreductase, group 1 0.67 Dsui_0549 queuosine biosynthesis protein QueC low > 51
Klebsiella michiganensis M5al 0.52 BWI76_RS24980 LLM class flavin-dependent oxidoreductase 0.31 BWI76_RS06560 7-cyano-7-deazaguanine synthase QueC low > 92
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_02034 luciferase-like monooxygenase 0.22 CCNA_03262 queuosine biosynthesis protein QueC low > 67
Enterobacter asburiae PDN3 0.52 EX28DRAFT_3209 luciferase family oxidoreductase, group 1 0.31 EX28DRAFT_2526 queuosine biosynthesis protein QueC low > 76
Caulobacter crescentus NA1000 0.52 CCNA_02034 luciferase-like monooxygenase 0.22 CCNA_03262 queuosine biosynthesis protein QueC low > 66
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.3159.1 Luciferase-like 0.63 Xcc-8004.1450.1 Queuosine Biosynthesis QueC ATPase low > 74
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS00255 LLM class flavin-dependent oxidoreductase 0.64 ABZR86_RS10785 7-cyano-7-deazaguanine synthase QueC low > 74
Agrobacterium fabrum C58 0.52 Atu3726 flavin dependent oxidoreductase 0.28 Atu3346 succinoglycan biosynthesis regulator low > 89
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS18895 alkane 1-monooxygenase 0.22 HSERO_RS20880 7-cyano-7-deazaguanine synthase low > 78
Enterobacter sp. TBS_079 0.51 MPMX20_04064 hypothetical protein 0.31 MPMX20_01035 7-cyano-7-deazaguanine synthase low > 85
Azospirillum sp. SherDot2 0.51 MPMX19_05887 hypothetical protein 0.59 MPMX19_00425 7-cyano-7-deazaguanine synthase low > 112
Escherichia coli ECOR38 0.51 HEPCGN_17040 yhbW luciferase-like monooxygenase 0.30 HEPCGN_06910 queC 7-cyano-7-deazaguanine synthase QueC low > 87
Escherichia coli Nissle 1917 0.51 ECOLIN_RS18150 luciferase-like monooxygenase 0.30 ECOLIN_RS02660 7-cyano-7-deazaguanine synthase QueC low > 55
Escherichia coli ECOR27 0.51 NOLOHH_09965 yhbW luciferase-like monooxygenase 0.30 NOLOHH_01230 queC 7-cyano-7-deazaguanine synthase QueC low > 75
Escherichia coli ECRC62 0.51 BNILDI_01565 yhbW luciferase-like monooxygenase 0.30 BNILDI_22645 queC 7-cyano-7-deazaguanine synthase QueC low > 75
Escherichia fergusonii Becca 0.51 EFB2_00663 hypothetical protein 0.30 EFB2_03613 7-cyano-7-deazaguanine synthase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_00540 hypothetical protein 0.30 OHPLBJKB_03229 7-cyano-7-deazaguanine synthase low > 73
Escherichia coli BW25113 0.51 b3160 yhbW predicted enzyme (NCBI) 0.30 b0444 ybaX predicted aluminum resistance protein (NCBI) low > 76
Castellaniella sp019104865 MT123 0.51 ABCV34_RS14830 LLM class flavin-dependent oxidoreductase 0.22 ABCV34_RS10950 7-cyano-7-deazaguanine synthase QueC low > 48
Escherichia coli BL21 0.51 ECD_03027 putative luciferase-like monooxygenase 0.30 ECD_00396 7-cyano-7-deazaguanine (preQ0) synthase; queuosine biosynthesis low > 61
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS15890 LLM class flavin-dependent oxidoreductase 0.64 LRK54_RS04855 7-cyano-7-deazaguanine synthase QueC low > 59
Serratia liquefaciens MT49 0.50 IAI46_01985 luciferase-like monooxygenase 0.28 IAI46_05045 7-cyano-7-deazaguanine synthase QueC low > 86
Rhodanobacter denitrificans MT42 0.50 LRK55_RS15645 LLM class flavin-dependent oxidoreductase 0.64 LRK55_RS04635 7-cyano-7-deazaguanine synthase QueC low > 63
Escherichia coli ECRC101 0.50 MCAODC_08685 yhbW luciferase-like monooxygenase 0.30 MCAODC_27520 queC 7-cyano-7-deazaguanine synthase QueC low > 87
Escherichia coli ECRC98 0.50 JDDGAC_21790 yhbW luciferase-like monooxygenase 0.30 JDDGAC_11950 queC 7-cyano-7-deazaguanine synthase QueC low > 86
Escherichia coli ECRC99 0.50 KEDOAH_09985 yhbW luciferase-like monooxygenase 0.30 KEDOAH_19670 queC 7-cyano-7-deazaguanine synthase QueC — —
Escherichia coli ECRC100 0.50 OKFHMN_18165 yhbW luciferase-like monooxygenase 0.30 OKFHMN_08295 queC 7-cyano-7-deazaguanine synthase QueC low > 80
Escherichia coli ECRC102 0.50 NIAGMN_15925 yhbW luciferase-like monooxygenase 0.30 NIAGMN_06350 queC 7-cyano-7-deazaguanine synthase QueC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF1508 Luciferase-like monooxygenase (EC 1.14.-.-) 0.31 GFF4360 Queuosine Biosynthesis QueC ATPase low > 78
Lysobacter sp. OAE881 0.50 ABIE51_RS11215 LLM class flavin-dependent oxidoreductase 0.70 ABIE51_RS05105 7-cyano-7-deazaguanine synthase QueC low > 62
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_04540 ssuD LLM class flavin-dependent oxidoreductase 0.65 OKGIIK_01895 queC 7-cyano-7-deazaguanine synthase QueC low > 52
Pectobacterium carotovorum WPP14 0.49 HER17_RS18170 LLM class flavin-dependent oxidoreductase 0.30 HER17_RS15815 7-cyano-7-deazaguanine synthase QueC low > 75
Pantoea sp. MT58 0.48 IAI47_16975 luciferase-like monooxygenase 0.29 IAI47_14620 7-cyano-7-deazaguanine synthase QueC low > 76
Alteromonas macleodii MIT1002 0.47 MIT1002_03895 Alkanal monooxygenase alpha chain 0.34 MIT1002_01263 7-cyano-7-deazaguanine synthase low > 70
Rhodospirillum rubrum S1H 0.47 Rru_A0927 luciferase-like (NCBI) 0.57 Rru_A1957 ExsB (NCBI) low > 58
Sphingomonas koreensis DSMZ 15582 0.46 Ga0059261_1372 luciferase family oxidoreductase, group 1 0.58 Ga0059261_3209 queuosine biosynthesis protein QueC low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS12650 LLM class flavin-dependent oxidoreductase 0.21 A4249_RS08700 7-cyano-7-deazaguanine synthase QueC — —
Phaeobacter inhibens DSM 17395 0.45 PGA1_c19970 luciferase family oxidoreductase, group 1 0.30 PGA1_c05600 queuosine biosynthesis protein QueC low > 62
Rhodopseudomonas palustris CGA009 0.35 TX73_019170 LLM class flavin-dependent oxidoreductase 0.25 TX73_014550 7-cyano-7-deazaguanine synthase QueC low > 86
Ralstonia solanacearum UW163 0.28 UW163_RS08870 LLM class flavin-dependent oxidoreductase 0.67 UW163_RS00625 7-cyano-7-deazaguanine synthase QueC — —
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS04800 LLM class flavin-dependent oxidoreductase 0.67 RALBFv3_RS12940 7-cyano-7-deazaguanine synthase QueC low > 76
Ralstonia solanacearum GMI1000 0.28 RS_RS12360 LLM class flavin-dependent oxidoreductase 0.66 RS_RS03715 7-cyano-7-deazaguanine synthase low > 80
Ralstonia solanacearum PSI07 0.27 RPSI07_RS12585 LLM class flavin-dependent oxidoreductase 0.67 RPSI07_RS20285 7-cyano-7-deazaguanine synthase QueC low > 81
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS00425 LLM class flavin-dependent oxidoreductase 0.66 ABZR87_RS09000 7-cyano-7-deazaguanine synthase QueC low > 80

Not shown: 6 genomes with orthologs for Psyr_0039 only; 18 genomes with orthologs for Psyr_1419 only