Conservation of cofitness between PP_0589 and PP_4352 in Pseudomonas putida KT2440

76 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0589 Bcr/CflA family multidrug resistance transporter 1.0 PP_4352 flagellin export apparatus, substrate specificity protein 0.14 15
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_21 Multidrug resistance transporter, Bcr/CflA family 0.76 PfGW456L13_4336 Flagellar biosynthesis protein FlhB low > 87
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_08050 MFS transporter 0.70 AO356_03755 flagellar biosynthetic protein FlhB low > 104
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_3484 Multidrug resistance transporter, Bcr/CflA family 0.71 Pf6N2E2_2577 Flagellar biosynthesis protein FlhB low > 103
Pseudomonas fluorescens SBW25 0.82 PFLU_RS03255 multidrug effflux MFS transporter 0.73 PFLU_RS21695 flagellar biosynthesis protein FlhB low > 109
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS03255 multidrug effflux MFS transporter 0.73 PFLU_RS21695 flagellar biosynthesis protein FlhB low > 109
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_0657 Drug resistance transporter Bcr/CflA subfamily 0.68 Psyr_3441 Flagellar biosynthetic protein FlhB low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_0657 Drug resistance transporter Bcr/CflA subfamily 0.68 Psyr_3441 Flagellar biosynthetic protein FlhB low > 86
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_1259 Multidrug resistance transporter, Bcr/CflA family 0.77 Pf1N1B4_3621 Flagellar biosynthesis protein FlhB low > 87
Pseudomonas simiae WCS417 0.81 PS417_03175 major facilitator transporter 0.73 PS417_19725 flagellar biosynthesis protein FlhB low > 88
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_06140 MFS transporter 0.70 AO353_18760 flagellar biosynthetic protein FlhB low > 101
Pseudomonas sp. RS175 0.79 PFR28_05247 Bicyclomycin resistance protein 0.70 PFR28_00848 Flagellar biosynthetic protein FlhB low > 88
Pseudomonas sp. S08-1 0.68 OH686_07365 Multidrug resistance transporter, Bcr/CflA family 0.69 OH686_02755 flagellar biosynthetic protein FlhB low > 80
Pseudomonas stutzeri RCH2 0.65 Psest_0741 drug resistance transporter, Bcr/CflA subfamily 0.67 Psest_1735 flagellar biosynthetic protein FlhB low > 67
Marinobacter adhaerens HP15 0.42 HP15_26 drug resistance transporter, Bcr/CflA family protein 0.48 HP15_2309 flagellar biosynthesis protein FlhB low > 73
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS28940 Bcr/CflA family drug resistance efflux transporter 0.37 RR42_RS35770 flagellar biosynthesis protein FlhB low > 128
Ralstonia solanacearum IBSBF1503 0.39 RALBFv3_RS03440 Bcr/CflA family drug resistance efflux transporter 0.33 RALBFv3_RS17465 flagellar type III secretion system protein FlhB low > 76
Ralstonia solanacearum UW163 0.39 UW163_RS10230 Bcr/CflA family drug resistance efflux transporter 0.33 UW163_RS21685 flagellar type III secretion system protein FlhB
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS23560 MFS transporter 0.36 HSERO_RS10140 flagellar biosynthesis protein FlhB low > 78
Ralstonia solanacearum GMI1000 0.39 RS_RS10900 Bcr/CflA family drug resistance efflux transporter 0.36 RS_RS23850 flagellar type III secretion system protein FlhB low > 80
Ralstonia solanacearum PSI07 0.38 RPSI07_RS13775 MFS transporter 0.36 RPSI07_RS06185 flagellar type III secretion system protein FlhB low > 81
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS15340 multidrug effflux MFS transporter 0.36 ABZR87_RS18015 flagellar biosynthesis protein FlhB low > 80
Azospirillum sp. SherDot2 0.34 MPMX19_06022 Bicyclomycin resistance protein 0.30 MPMX19_00867 Flagellar biosynthetic protein FlhB low > 112
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01288 multidrug resistance transporter, Bcr family 0.23 CCNA_01131 flagellar biosynthesis protein FlhB low > 67
Caulobacter crescentus NA1000 0.33 CCNA_01288 multidrug resistance transporter, Bcr family 0.23 CCNA_01131 flagellar biosynthesis protein FlhB low > 66
Variovorax sp. SCN45 0.32 GFF1385 Multidrug resistance transporter, Bcr/CflA family 0.37 GFF5770 Flagellar biosynthesis protein FlhB low > 127
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS00225 multidrug effflux MFS transporter 0.37 ABZR86_RS20245 flagellar biosynthesis protein FlhB low > 74
Paraburkholderia sabiae LMG 24235 0.30 QEN71_RS03315 Bcr/CflA family multidrug efflux MFS transporter 0.36 QEN71_RS28960 flagellar biosynthesis protein FlhB low > 153
Paraburkholderia graminis OAS925 0.29 ABIE53_003239 DHA1 family bicyclomycin/chloramphenicol resistance-like MFS transporter 0.37 ABIE53_000114 flagellar biosynthetic protein FlhB low > 113
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS15365 Bcr/CflA family drug resistance efflux transporter 0.39 BPHYT_RS18945 flagellar biosynthesis protein FlhB low > 109
Paraburkholderia bryophila 376MFSha3.1 0.28 H281DRAFT_04016 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein 0.37 H281DRAFT_05752 flagellar biosynthetic protein FlhB low > 103
Bosea sp. OAE506 0.28 ABIE41_RS02750 multidrug effflux MFS transporter 0.29 ABIE41_RS13350 flagellar biosynthesis protein FlhB low > 77
Dickeya dianthicola ME23 0.27 DZA65_RS09505 Bcr/CflA family multidrug efflux MFS transporter 0.41 DZA65_RS14040 flagellar type III secretion system protein FlhB low > 75
Magnetospirillum magneticum AMB-1 0.27 AMB_RS01475 MFS transporter 0.26 AMB_RS03190 flagellar biosynthesis protein FlhB low > 64
Dickeya dadantii 3937 0.27 DDA3937_RS01640 multidrug effflux MFS transporter 0.41 DDA3937_RS13510 flagellar type III secretion system protein FlhB low > 74
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_08215 Bcr/CflA family drug resistance efflux transporter 0.46 CSW01_10580 flagellar biosynthesis protein FlhB low > 62
Rahnella sp. WP5 0.27 EX31_RS23035 multidrug effflux MFS transporter 0.30 EX31_RS11345 flagellar type III secretion system protein FlhB low > 89
Dickeya dianthicola 67-19 0.27 HGI48_RS09205 Bcr/CflA family multidrug efflux MFS transporter 0.41 HGI48_RS13555 flagellar type III secretion system protein FlhB low > 71
Pectobacterium carotovorum WPP14 0.26 HER17_RS13830 multidrug effflux MFS transporter 0.36 HER17_RS08135 flagellar type III secretion system protein FlhB low > 75
Serratia liquefaciens MT49 0.26 IAI46_17340 Bcr/CflA family multidrug efflux MFS transporter 0.37 IAI46_16000 flagellar type III secretion system protein FlhB low > 86
Escherichia coli ECRC100 0.25 OKFHMN_02485 araJ Bcr/CflA family drug resistance efflux transporter 0.35 OKFHMN_26165 flhB flagellar biosynthesis protein FlhB low > 80
Escherichia coli ECOR38 0.25 HEPCGN_25715 araJ Bcr/CflA family drug resistance efflux transporter 0.35 HEPCGN_04585 flhB flagellar biosynthesis protein FlhB low > 87
Escherichia coli ECRC102 0.25 NIAGMN_26655 araJ Bcr/CflA family drug resistance efflux transporter 0.35 NIAGMN_01895 flhB flagellar biosynthesis protein FlhB
Escherichia coli Nissle 1917 0.25 ECOLIN_RS07800 multidrug effflux MFS transporter 0.35 ECOLIN_RS10740 flagellar biosynthesis protein FlhB low > 55
Escherichia coli ECRC99 0.25 KEDOAH_26290 araJ Bcr/CflA family drug resistance efflux transporter 0.35 KEDOAH_01940 flhB flagellar biosynthesis protein FlhB
Escherichia coli ECRC101 0.25 MCAODC_15785 araJ Bcr/CflA family drug resistance efflux transporter 0.35 MCAODC_19240 flhB flagellar biosynthesis protein FlhB low > 87
Escherichia fergusonii Becca 0.25 EFB2_02631 Bicyclomycin resistance protein 0.35 EFB2_02063 Flagellar biosynthetic protein FlhB low > 86
Escherichia coli ECRC98 0.25 JDDGAC_05030 araJ Bcr/CflA family drug resistance efflux transporter 0.35 JDDGAC_00740 flhB flagellar biosynthesis protein FlhB low > 86
Pantoea sp. MT58 0.25 IAI47_06590 Bcr/CflA family multidrug efflux MFS transporter 0.34 IAI47_08345 flagellar type III secretion system protein FlhB low > 76
Azospirillum brasilense Sp245 0.25 AZOBR_RS00095 MFS transporter permease 0.32 AZOBR_RS11110 flagellar biosynthesis protein low > 97
Erwinia tracheiphila SCR3 0.24 LU632_RS17590 Bcr/CflA family multidrug efflux MFS transporter 0.32 LU632_RS13510 flhB flagellar type III secretion system protein FlhB low > 74
Rhizobium sp. OAE497 0.23 ABIE40_RS09565 multidrug effflux MFS transporter 0.22 ABIE40_RS02930 flagellar biosynthesis protein FlhB low > 107
Enterobacter sp. TBS_079 0.23 MPMX20_03148 Bicyclomycin resistance protein 0.38 MPMX20_02784 Flagellar biosynthetic protein FlhB low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF3754 MFS family multidrug transport protein, bicyclomycin resistance protein 0.39 GFF1661 Flagellar biosynthesis protein FlhB low > 78
Escherichia coli ECRC62 0.23 BNILDI_13860 bcr multidrug efflux MFS transporter Bcr 0.35 BNILDI_15395 flhB flagellar biosynthesis protein FlhB low > 75
Escherichia coli BW25113 0.23 b2182 bcr bicyclomycin/multidrug efflux system (NCBI) 0.35 b1880 flhB flagellar biosynthesis protein B (NCBI) low > 76
Escherichia coli BL21 0.23 ECD_02112 bicyclomycin/cysteine/sulfonamide efflux transporter 0.35 ECD_01851 flagellin export apparatus, substrate specificity protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_01527 Bicyclomycin resistance protein 0.35 OHPLBJKB_01848 Flagellar biosynthetic protein FlhB low > 73
Escherichia coli ECOR27 0.23 NOLOHH_14940 bcr multidrug efflux MFS transporter Bcr 0.35 NOLOHH_16605 flhB flagellar biosynthesis protein FlhB low > 75
Enterobacter asburiae PDN3 0.23 EX28DRAFT_0379 drug resistance transporter, Bcr/CflA subfamily 0.37 EX28DRAFT_0680 flagellar biosynthetic protein FlhB low > 76
Shewanella amazonensis SB2B 0.21 Sama_2017 bicyclomycin resistance protein (RefSeq) 0.45 Sama_2284 flhB flagellar biosynthesis protein FlhB (RefSeq) low > 62
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1673 MFS transporter 0.29 Ac3H11_1385 Flagellar biosynthesis protein FlhB low > 79
Phaeobacter inhibens DSM 17395 0.21 PGA1_c21620 putative bicyclomycin resistance protein 0.20 PGA1_c35730 flagellar biosynthetic protein FlhB low > 62
Shewanella loihica PV-4 0.21 Shew_3588 Bcr/CflA subfamily drug resistance transporter (RefSeq) 0.47 Shew_1379 flhB flagellar biosynthesis protein FlhB (RefSeq) low > 60
Shewanella sp. ANA-3 0.20 Shewana3_2062 inner membrane transport protein YdhC (RefSeq) 0.46 Shewana3_1355 flhB flagellar biosynthesis protein FlhB (RefSeq) low > 73
Brevundimonas sp. GW460-12-10-14-LB2 0.19 A4249_RS14555 multidrug effflux MFS transporter 0.29 A4249_RS15235 flagellar biosynthesis protein FlhB low > 48
Rhodopseudomonas palustris CGA009 0.19 TX73_018225 multidrug effflux MFS transporter 0.30 TX73_020135 flagellar biosynthesis protein FlhB low > 86
Shewanella oneidensis MR-1 0.19 SO2373 drug resistance transporter, Bcr/CflA family protein (NCBI ptt file) 0.46 SO3215 flhB flagellar biosynthetic protein FlhB (NCBI ptt file) low > 76
Sinorhizobium meliloti 1021 0.19 SMc03825 transporter 0.23 SMc03018 flagellar biosynthesis protein FlhB low > 103
Lysobacter sp. OAE881 0.19 ABIE51_RS14645 multidrug effflux MFS transporter 0.35 ABIE51_RS16845 flagellar biosynthesis protein FlhB low > 62
Xanthomonas campestris pv. campestris strain 8004 0.19 Xcc-8004.3876.1 MFS transporter 0.37 Xcc-8004.2827.1 Flagellar biosynthesis protein FlhB low > 74
Agrobacterium fabrum C58 0.18 Atu2666 MFS permease 0.25 Atu0564 flagellar biosynthetic protein low > 89
Rhodospirillum rubrum S1H 0.18 Rru_A2971 Drug resistance transporter Bcr/CflA subfamily (NCBI) 0.25 Rru_A2821 Flagellar biosynthetic protein FlhB (NCBI) low > 58
Hydrogenophaga sp. GW460-11-11-14-LB1 0.18 GFF5490 Multidrug resistance transporter, Bcr/CflA family 0.28 GFF4088 Flagellar biosynthesis protein FlhB low > 90
Dinoroseobacter shibae DFL-12 0.16 Dshi_0717 drug resistance transporter, Bcr/CflA subfamily (RefSeq) 0.21 Dshi_3256 type III secretion exporter (RefSeq) low > 64
Sphingomonas koreensis DSMZ 15582 0.16 Ga0059261_2714 drug resistance transporter, Bcr/CflA subfamily 0.28 Ga0059261_2059 Flagellar biosynthesis pathway, component FlhB low > 68
Alteromonas macleodii MIT1002 0.16 MIT1002_04046 Sulfonamide resistance protein 0.44 MIT1002_01098 Flagellar biosynthetic protein FlhB low > 70

Not shown: 10 genomes with orthologs for PP_0589 only; 7 genomes with orthologs for PP_4352 only