| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_2000 | | amidophosphoribosyl transferase | 1.0 | PP_2371 | | Sulphite reductase hemoprotein, beta subunit | 0.37 | 18 |
| Pseudomonas fluorescens GW456-L13 | 0.94 | PfGW456L13_3935 | | Amidophosphoribosyltransferase (EC 2.4.2.14) | 0.91 | PfGW456L13_2843 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | — | — |
| Pseudomonas sp. RS175 | 0.94 | PFR28_02811 | | Amidophosphoribosyltransferase | 0.92 | PFR28_01366 | | Sulfite reductase [ferredoxin] | 0.63 | 15 |
| Pseudomonas fluorescens FW300-N2E3 | 0.94 | AO353_20690 | | amidophosphoribosyltransferase | 0.90 | AO353_22800 | | sulfite reductase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.94 | Pf6N2E2_76 | | Amidophosphoribosyltransferase (EC 2.4.2.14) | 0.91 | Pf6N2E2_2073 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | — | — |
| Pseudomonas simiae WCS417 | 0.94 | PS417_18535 | | amidophosphoribosyltransferase | 0.91 | PS417_12290 | | sulfite reductase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.94 | PFLU_RS20515 | | amidophosphoribosyltransferase | 0.91 | PFLU_RS12980 | | nitrite/sulfite reductase | 0.42 | 28 |
| Pseudomonas fluorescens SBW25 | 0.94 | PFLU_RS20515 | | amidophosphoribosyltransferase | 0.91 | PFLU_RS12980 | | nitrite/sulfite reductase | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.93 | AO356_21465 | | amidophosphoribosyltransferase | 0.91 | AO356_00555 | | sulfite reductase | 0.78 | 23 |
| Pseudomonas stutzeri RCH2 | 0.93 | Psest_2579 | | amidophosphoribosyltransferase | 0.82 | Psest_2089 | | Sulfite reductase, beta subunit (hemoprotein) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.92 | Psyr_1668 | | amidophosphoribosyltransferase | 0.91 | Psyr_2462 | | Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region | 0.54 | 71 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.92 | Psyr_1668 | | amidophosphoribosyltransferase | 0.91 | Psyr_2462 | | Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region | low | > 86 |
| Pseudomonas sp. S08-1 | 0.91 | OH686_04420 | | amidophosphoribosyltransferase | 0.86 | OH686_03470 | | Sulfite reductase [NADPH] hemoprotein beta-component | — | — |
| Marinobacter adhaerens HP15 | 0.76 | HP15_1821 | | amidophosphoribosyltransferase | 0.70 | HP15_1795 | | sulfite reductase hemoprotein, beta subunit | — | — |
| Acinetobacter radioresistens SK82 | 0.72 | MPMX26_01122 | | Amidophosphoribosyltransferase | 0.67 | MPMX26_00614 | | Sulfite reductase [ferredoxin] | 0.88 | 12 |
| Kangiella aquimarina DSM 16071 | 0.72 | B158DRAFT_1488 | | amidophosphoribosyltransferase (EC 2.4.2.14) | 0.09 | B158DRAFT_2161 | | sulfite reductase (NADPH) beta subunit (EC 1.8.1.2) | — | — |
| Rhodanobacter sp. FW510-T8 | 0.65 | OKGIIK_05570 | purF | amidophosphoribosyltransferase | 0.07 | OKGIIK_05965 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 52 |
| Shewanella amazonensis SB2B | 0.64 | Sama_2146 | | amidophosphoribosyltransferase (RefSeq) | 0.07 | Sama_2838 | | sulfite reductase subunit beta (RefSeq) | 0.82 | 20 |
| Dickeya dadantii 3937 | 0.64 | DDA3937_RS14435 | | amidophosphoribosyltransferase | 0.07 | DDA3937_RS16940 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.67 | 38 |
| Dickeya dianthicola 67-19 | 0.64 | HGI48_RS14405 | | amidophosphoribosyltransferase | 0.07 | HGI48_RS17010 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.71 | 20 |
| Shewanella sp. ANA-3 | 0.64 | Shewana3_1483 | | amidophosphoribosyltransferase (RefSeq) | 0.07 | Shewana3_0856 | | sulfite reductase subunit beta (RefSeq) | 0.88 | 24 |
| Dickeya dianthicola ME23 | 0.64 | DZA65_RS15335 | | amidophosphoribosyltransferase | 0.07 | DZA65_RS18085 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.65 | 38 |
| Pectobacterium carotovorum WPP14 | 0.64 | HER17_RS07020 | | amidophosphoribosyltransferase | 0.07 | HER17_RS04240 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.83 | 71 |
| Shewanella oneidensis MR-1 | 0.64 | SO3064 | purF | amidophosphoribosyltransferase (NCBI ptt file) | 0.07 | SO3737 | cysI | sulfite reductase (NADPH) hemoprotein beta-component (cysI) (NCBI ptt file) | 0.89 | 11 |
| Alteromonas macleodii MIT1002 | 0.64 | MIT1002_02524 | | Amidophosphoribosyltransferase | 0.07 | MIT1002_03379 | | Sulfite reductase [NADPH] hemoprotein beta-component | — | — |
| Escherichia coli BW25113 | 0.63 | b2312 | purF | amidophosphoribosyltransferase (NCBI) | 0.07 | b2763 | cysI | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) | 0.75 | 60 |
| Serratia liquefaciens MT49 | 0.63 | IAI46_17810 | | amidophosphoribosyltransferase | 0.07 | IAI46_03690 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 86 |
| Escherichia coli ECOR27 | 0.63 | NOLOHH_14335 | purF | amidophosphoribosyltransferase | 0.07 | NOLOHH_12190 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 57 |
| Escherichia coli ECRC62 | 0.63 | BNILDI_13255 | purF | amidophosphoribosyltransferase | 0.07 | BNILDI_10740 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Escherichia coli BL21 | 0.63 | ECD_02237 | | amidophosphoribosyltransferase | 0.07 | ECD_02608 | | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding | low | > 60 |
| Erwinia tracheiphila SCR3 | 0.63 | LU632_RS07865 | purF | amidophosphoribosyltransferase | 0.07 | LU632_RS06405 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 74 |
| Escherichia coli ECRC98 | 0.63 | JDDGAC_26675 | purF | amidophosphoribosyltransferase | 0.07 | JDDGAC_24040 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Escherichia coli ECRC101 | 0.63 | MCAODC_13755 | purF | amidophosphoribosyltransferase | 0.07 | MCAODC_10900 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Escherichia coli ECRC101 | 0.63 | OKFHMN_22715 | purF | amidophosphoribosyltransferase | 0.07 | OKFHMN_20375 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Shewanella loihica PV-4 | 0.63 | Shew_2302 | | amidophosphoribosyltransferase (RefSeq) | 0.08 | Shew_0666 | | sulfite reductase subunit beta (RefSeq) | low | > 60 |
| Escherichia coli ECRC99 | 0.63 | KEDOAH_05480 | purF | amidophosphoribosyltransferase | 0.07 | KEDOAH_07750 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Escherichia fergusonii Becca | 0.63 | EFB2_01546 | | Amidophosphoribosyltransferase | 0.07 | EFB2_01154 | | Sulfite reductase [NADPH] hemoprotein beta-component | low | > 86 |
| Escherichia coli ECRC102 | 0.63 | NIAGMN_20485 | purF | amidophosphoribosyltransferase | 0.07 | NIAGMN_18145 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Escherichia coli Nissle 1917 | 0.63 | ECOLIN_RS13405 | | amidophosphoribosyltransferase | 0.07 | ECOLIN_RS15405 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Escherichia coli ECOR38 | 0.63 | HEPCGN_21910 | purF | amidophosphoribosyltransferase | 0.07 | HEPCGN_19090 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.63 | GFF1927 | | Amidophosphoribosyltransferase (EC 2.4.2.14) | 0.07 | GFF4819 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | low | > 78 |
| Lysobacter sp. OAE881 | 0.63 | ABIE51_RS06180 | | amidophosphoribosyltransferase | 0.07 | ABIE51_RS15830 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 62 |
| Klebsiella michiganensis M5al | 0.63 | BWI76_RS20350 | | amidophosphoribosyltransferase | 0.08 | BWI76_RS22760 | | sulfite reductase subunit beta | 0.80 | 33 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.63 | OHPLBJKB_01393 | | Amidophosphoribosyltransferase | 0.07 | OHPLBJKB_00970 | | Sulfite reductase [NADPH] hemoprotein beta-component | low | > 73 |
| Enterobacter asburiae PDN3 | 0.63 | EX28DRAFT_0292 | | amidophosphoribosyltransferase (EC 2.4.2.14) | 0.08 | EX28DRAFT_2852 | | sulfite reductase (NADPH) hemoprotein, beta-component | low | > 76 |
| Enterobacter sp. TBS_079 | 0.63 | MPMX20_03247 | | Amidophosphoribosyltransferase | 0.07 | MPMX20_03642 | | Sulfite reductase [NADPH] hemoprotein beta-component | 0.64 | 70 |
| Pantoea sp. MT58 | 0.63 | IAI47_06275 | | amidophosphoribosyltransferase | 0.08 | IAI47_04155 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.74 | 63 |
| Rahnella sp. WP5 | 0.63 | EX31_RS19570 | | amidophosphoribosyltransferase | 0.07 | EX31_RS07900 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.86 | 63 |
| Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS16445 | | amidophosphoribosyltransferase | 0.68 | HSERO_RS15550 | | sulfite reductase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.60 | H281DRAFT_06060 | | amidophosphoribosyltransferase | 0.67 | H281DRAFT_00114 | | sulfite reductase (NADPH) beta subunit | 0.42 | 32 |
| Ralstonia sp. UNC404CL21Col | 0.60 | ABZR87_RS14465 | | amidophosphoribosyltransferase | 0.63 | ABZR87_RS00210 | | nitrite/sulfite reductase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.60 | RALBFv3_RS02550 | | amidophosphoribosyltransferase | 0.64 | RALBFv3_RS04600 | | sulfite reductase | — | — |
| Ralstonia solanacearum UW163 | 0.60 | UW163_RS11175 | | amidophosphoribosyltransferase | 0.64 | UW163_RS09070 | | sulfite reductase | — | — |
| Paraburkholderia graminis OAS925 | 0.60 | ABIE53_004816 | | amidophosphoribosyltransferase | 0.67 | ABIE53_001226 | | sulfite reductase (NADPH) hemoprotein beta-component | — | — |
| Burkholderia phytofirmans PsJN | 0.60 | BPHYT_RS33840 | | amidophosphoribosyltransferase | 0.67 | BPHYT_RS04725 | | sulfite reductase | 0.75 | 56 |
| Ralstonia solanacearum GMI1000 | 0.60 | RS_RS09930 | | amidophosphoribosyltransferase | 0.63 | RS_RS12170 | | nitrite/sulfite reductase | — | — |
| Ralstonia solanacearum PSI07 | 0.60 | RPSI07_RS14765 | | amidophosphoribosyltransferase | 0.64 | RPSI07_RS12775 | | nitrite/sulfite reductase | — | — |
| Dechlorosoma suillum PS | 0.59 | Dsui_3186 | | amidophosphoribosyltransferase | 0.69 | Dsui_1986 | | sulfite reductase, beta subunit (hemoprotein) | — | — |
| Castellaniella sp019104865 MT123 | 0.59 | ABCV34_RS04130 | | amidophosphoribosyltransferase | 0.08 | ABCV34_RS00215 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.59 | RR42_RS14325 | | amidophosphoribosyltransferase | 0.64 | RR42_RS16270 | | sulfite reductase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.58 | QEN71_RS17680 | | amidophosphoribosyltransferase | 0.67 | QEN71_RS25255 | | nitrite/sulfite reductase | 0.82 | 30 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.57 | GFF300 | | Amidophosphoribosyltransferase (EC 2.4.2.14) | 0.54 | GFF4293 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | — | — |
| Acidovorax sp. GW101-3H11 | 0.57 | Ac3H11_2608 | | Amidophosphoribosyltransferase (EC 2.4.2.14) | 0.56 | Ac3H11_577 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.75 | 29 |
| Variovorax sp. OAS795 | 0.56 | ABID97_RS21635 | | amidophosphoribosyltransferase | 0.55 | ABID97_RS15380 | | nitrite/sulfite reductase | — | — |
| Variovorax sp. SCN45 | 0.56 | GFF3089 | | Amidophosphoribosyltransferase (EC 2.4.2.14) | 0.53 | GFF1206 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.80 | 39 |
| Synechococcus elongatus PCC 7942 | 0.31 | Synpcc7942_0004 | purF | amidophosphoribosyltransferase | 0.14 | Synpcc7942_1240 | nirA | ferredoxin-nitrite reductase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.30 | CCNA_01730 | | amidophosphoribosyltransferase | 0.56 | CCNA_01177 | | sulfite reductase, beta subunit | low | > 67 |
| Caulobacter crescentus NA1000 | 0.30 | CCNA_01730 | | amidophosphoribosyltransferase | 0.56 | CCNA_01177 | | sulfite reductase, beta subunit | low | > 66 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.29 | A4249_RS03735 | | amidophosphoribosyltransferase | 0.56 | A4249_RS09665 | | nitrite/sulfite reductase | — | — |
| Azospirillum sp. SherDot2 | 0.28 | MPMX19_00906 | | Amidophosphoribosyltransferase | 0.55 | MPMX19_00652 | | Sulfite reductase [ferredoxin] | 0.94 | 3 |
| Rhodopseudomonas palustris CGA009 | 0.28 | TX73_015990 | | amidophosphoribosyltransferase | 0.56 | TX73_021840 | | nitrite/sulfite reductase | — | — |
| Rhodospirillum rubrum S1H | 0.28 | Rru_A0404 | | Amidophosphoribosyl transferase (NCBI) | 0.56 | Rru_A1931 | | Ferredoxin--nitrite reductase (NCBI) | — | — |
| Azospirillum brasilense Sp245 | 0.28 | AZOBR_RS08310 | | amidophosphoribosyltransferase | 0.57 | AZOBR_RS10125 | | sulfite reductase | 0.65 | 22 |
| Bosea sp. OAE506 | 0.28 | ABIE41_RS17810 | | amidophosphoribosyltransferase | 0.57 | ABIE41_RS15335 | | nitrite/sulfite reductase | low | > 77 |
| Phaeobacter inhibens DSM 17395 | 0.27 | PGA1_c10810 | | amidophosphoribosyltransferase PurF | 0.50 | PGA1_c20760 | | putative nitrite/sulfite reductase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.27 | Dshi_2132 | | amidophosphoribosyltransferase (RefSeq) | 0.52 | Dshi_1153 | | nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein (RefSeq) | — | — |
| Agrobacterium fabrum C58 | 0.27 | Atu1075 | | amidophosphoribosyltransferase | 0.54 | Atu1456 | | sulfite reductase (NADPH) hemoprotein beta-component | 0.82 | 44 |
| Rhizobium sp. OAE497 | 0.27 | ABIE40_RS06270 | | amidophosphoribosyltransferase | 0.58 | ABIE40_RS20885 | | DUF2849 domain-containing protein | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.26 | SMc00554 | | amidophosphoribosyltransferase | 0.54 | SMc02124 | | nitrite reductase | 0.92 | 29 |
| Sphingomonas koreensis DSMZ 15582 | 0.25 | Ga0059261_3626 | | amidophosphoribosyltransferase (EC 2.4.2.14) | 0.58 | Ga0059261_1498 | | Sulfite reductase, beta subunit (hemoprotein) | — | — |
Not shown: 14 genomes with orthologs for PP_2000 only; 1 genomes with orthologs for PP_2371 only