Conservation of cofitness between PP_2324 and PP_1088 in Pseudomonas putida KT2440

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2324 tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase 1.0 PP_1088 Argininosuccinate synthase 0.40 4
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_2470 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.95 Pf6N2E2_5590 Argininosuccinate synthase (EC 6.3.4.5) — —
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_03200 phospho-2-dehydro-3-deoxyheptonate aldolase 0.95 AO356_18325 argininosuccinate synthase 0.40 45
Pseudomonas fluorescens SBW25 0.91 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase 0.96 PFLU_RS05725 argininosuccinate synthase — —
Pseudomonas simiae WCS417 0.91 PS417_08430 phospho-2-dehydro-3-deoxyheptonate aldolase 0.96 PS417_05640 argininosuccinate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase 0.96 PFLU_RS05725 argininosuccinate synthase — —
Pseudomonas sp. RS175 0.91 PFR28_00962 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.96 PFR28_03353 Argininosuccinate synthase — —
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_289 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.96 Pf1N1B4_742 Argininosuccinate synthase (EC 6.3.4.5) low > 87
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_19030 phospho-2-dehydro-3-deoxyheptonate aldolase 0.95 AO353_04105 argininosuccinate synthase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.95 Psyr_3892 argininosuccinate synthase — —
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.95 Psyr_3892 argininosuccinate synthase — —
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_2224 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.96 PfGW456L13_1749 Argininosuccinate synthase (EC 6.3.4.5) low > 87
Pseudomonas sp. S08-1 0.89 OH686_01760 3-deoxy-7-phosphoheptulonate synthase 0.95 OH686_03930 argininosuccinate synthase low > 80
Pseudomonas stutzeri RCH2 0.86 Psest_2331 phospho-2-dehydro-3-deoxyheptonate aldolase 0.95 Psest_3121 argininosuccinate synthase — —
Marinobacter adhaerens HP15 0.73 HP15_1814 phospho-2-dehydro-3-heoxyheptonate aldolase 0.82 HP15_2367 argininosuccinate synthase — —
Acinetobacter radioresistens SK82 0.69 MPMX26_01673 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.14 MPMX26_02260 Argininosuccinate synthase low > 36
Dechlorosoma suillum PS 0.62 Dsui_2381 phospho-2-dehydro-3-deoxyheptonate aldolase 0.79 Dsui_3248 argininosuccinate synthase — —
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_03635 3-deoxy-7-phosphoheptulonate synthase 0.48 CSW01_13370 argininosuccinate synthase low > 62
Erwinia tracheiphila SCR3 0.59 LU632_RS15450 3-deoxy-7-phosphoheptulonate synthase 0.47 LU632_RS19605 argininosuccinate synthase 0.49 26
Pantoea sp. MT58 0.58 IAI47_04400 3-deoxy-7-phosphoheptulonate synthase 0.46 IAI47_00915 argininosuccinate synthase low > 76
Shewanella loihica PV-4 0.58 Shew_1067 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.48 Shew_0205 argininosuccinate synthase (RefSeq) 0.57 45
Alteromonas macleodii MIT1002 0.58 MIT1002_01314 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.48 MIT1002_00468 Argininosuccinate synthase low > 70
Serratia liquefaciens MT49 0.58 IAI46_03955 3-deoxy-7-phosphoheptulonate synthase 0.48 IAI46_24505 argininosuccinate synthase 0.86 11
Pectobacterium carotovorum WPP14 0.57 HER17_RS05375 3-deoxy-7-phosphoheptulonate synthase 0.14 HER17_RS21055 argininosuccinate synthase low > 75
Dickeya dianthicola 67-19 0.57 HGI48_RS16260 3-deoxy-7-phosphoheptulonate synthase 0.14 HGI48_RS00355 argininosuccinate synthase — —
Dickeya dadantii 3937 0.57 DDA3937_RS16140 3-deoxy-7-phosphoheptulonate synthase 0.14 DDA3937_RS20890 argininosuccinate synthase — —
Dickeya dianthicola ME23 0.57 DZA65_RS17355 3-deoxy-7-phosphoheptulonate synthase 0.14 DZA65_RS00355 argininosuccinate synthase — —
Shewanella sp. ANA-3 0.57 Shewana3_3013 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.46 Shewana3_3902 argininosuccinate synthase (RefSeq) 0.74 63
Escherichia fergusonii Becca 0.57 EFB2_01291 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.13 EFB2_00651 Argininosuccinate synthase low > 86
Escherichia coli ECOR27 0.57 NOLOHH_12890 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.13 NOLOHH_09890 argG argininosuccinate synthase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_01107 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.13 OHPLBJKB_00528 Argininosuccinate synthase low > 73
Escherichia coli Nissle 1917 0.57 ECOLIN_RS14705 3-deoxy-7-phosphoheptulonate synthase AroF 0.13 ECOLIN_RS18275 argininosuccinate synthase low > 52
Enterobacter sp. TBS_079 0.57 MPMX20_03469 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.14 MPMX20_04077 Argininosuccinate synthase 0.75 13
Escherichia coli BL21 0.57 ECD_02490 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible 0.13 ECD_03038 argininosuccinate synthetase low > 60
Rahnella sp. WP5 0.57 EX31_RS07595 3-deoxy-7-phosphoheptulonate synthase 0.15 EX31_RS13445 argininosuccinate synthase 0.81 43
Escherichia coli ECRC62 0.57 BNILDI_11695 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.13 BNILDI_01645 argG argininosuccinate synthase — —
Escherichia coli ECOR38 0.57 HEPCGN_20335 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.13 HEPCGN_16965 argG argininosuccinate synthase low > 85
Escherichia coli ECRC99 0.57 KEDOAH_07005 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.13 KEDOAH_10060 argG argininosuccinate synthase — —
Escherichia coli BW25113 0.57 b2601 aroF 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible (NCBI) 0.13 b3172 argG argininosuccinate synthase (NCBI) 0.80 5
Escherichia coli ECRC98 0.57 JDDGAC_24880 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.13 JDDGAC_21715 argG argininosuccinate synthase — —
Escherichia coli ECRC101 0.57 OKFHMN_21215 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.13 OKFHMN_18090 argG argininosuccinate synthase — —
Escherichia coli ECRC101 0.57 MCAODC_11745 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.13 MCAODC_08610 argG argininosuccinate synthase — —
Escherichia coli ECRC102 0.57 NIAGMN_18985 aroF 3-deoxy-7-phosphoheptulonate synthase AroF 0.13 NIAGMN_15850 argG argininosuccinate synthase — —
Enterobacter asburiae PDN3 0.57 EX28DRAFT_2702 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) 0.14 EX28DRAFT_3224 argininosuccinate synthase (EC 6.3.4.5) 0.80 15
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF4176 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.13 GFF2913 Argininosuccinate synthase (EC 6.3.4.5) low > 78
Klebsiella michiganensis M5al 0.56 BWI76_RS21480 phospho-2-dehydro-3-deoxyheptonate aldolase 0.14 BWI76_RS25115 argininosuccinate synthase 0.65 32
Shewanella oneidensis MR-1 0.56 SO1361 aroF phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive (NCBI ptt file) 0.46 SO0278 argG argininosuccinate synthase (NCBI ptt file) 0.74 29
Shewanella amazonensis SB2B 0.54 Sama_0893 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.46 Sama_0259 argininosuccinate synthase (RefSeq) 0.77 25
Synechococcus elongatus PCC 7942 0.53 Synpcc7942_2501 aroF phospho-2-dehydro-3-heoxyheptonate aldolase 0.42 Synpcc7942_0009 argG argininosuccinate synthase — —
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_1384 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) 0.21 B158DRAFT_1976 argininosuccinate synthase (EC 6.3.4.5) low > 40
Acidovorax sp. GW101-3H11 0.48 Ac3H11_4034 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.14 Ac3H11_2616 Argininosuccinate synthase (EC 6.3.4.5) — —
Variovorax sp. SCN45 0.48 GFF4447 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) 0.14 GFF3096 Argininosuccinate synthase (EC 6.3.4.5) — —
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS07160 phospho-2-dehydro-3-deoxyheptonate aldolase 0.14 HSERO_RS07180 argininosuccinate synthase — —
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS02730 3-deoxy-7-phosphoheptulonate synthase 0.21 LRK54_RS02400 argininosuccinate synthase low > 59
Rhodanobacter denitrificans MT42 0.48 LRK55_RS02485 3-deoxy-7-phosphoheptulonate synthase 0.21 LRK55_RS02155 argininosuccinate synthase low > 63
Hydrogenophaga sp. GW460-11-11-14-LB1 0.47 GFF581 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) 0.13 GFF294 Argininosuccinate synthase (EC 6.3.4.5) — —
Ralstonia solanacearum UW163 0.47 UW163_RS00610 3-deoxy-7-phosphoheptulonate synthase 0.14 UW163_RS08445 argininosuccinate synthase — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS12955 3-deoxy-7-phosphoheptulonate synthase 0.14 RALBFv3_RS05180 argininosuccinate synthase — —
Variovorax sp. OAS795 0.47 ABID97_RS06345 3-deoxy-7-phosphoheptulonate synthase 0.14 ABID97_RS21670 argininosuccinate synthase — —
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_09785 3-deoxy-7-phosphoheptulonate synthase 0.20 OKGIIK_09465 argG argininosuccinate synthase low > 52
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS05860 phospho-2-dehydro-3-deoxyheptonate aldolase 0.77 RR42_RS17170 argininosuccinate synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.704.1 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) 0.21 Xcc-8004.2318.1 Argininosuccinate synthase (EC 6.3.4.5) low > 74
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS00390 3-deoxy-7-phosphoheptulonate synthase 0.21 ABZR86_RS08715 arginosuccinate synthetase (EC 6.3.4.5) (from data) 0.61 21
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS12205 3-deoxy-7-phosphoheptulonate synthase 0.14 ABZR87_RS00835 argininosuccinate synthase low > 80
Ralstonia solanacearum GMI1000 0.46 RS_RS13320 3-deoxy-7-phosphoheptulonate synthase 0.14 RS_RS12800 argininosuccinate synthase — —
Ralstonia solanacearum PSI07 0.46 RPSI07_RS11845 3-deoxy-7-phosphoheptulonate synthase 0.14 RPSI07_RS12120 argininosuccinate synthase — —
Paraburkholderia graminis OAS925 0.46 ABIE53_003992 3-deoxy-7-phosphoheptulonate synthase 0.76 ABIE53_003355 argininosuccinate synthase — —
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS26560 3-deoxy-7-phosphoheptulonate synthase AroG 0.14 QEN71_RS09235 argininosuccinate synthase 0.39 113
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS23245 phospho-2-dehydro-3-deoxyheptonate aldolase 0.76 BPHYT_RS15920 argininosuccinate synthase low > 109
Rhodopseudomonas palustris CGA009 0.45 TX73_000140 3-deoxy-7-phosphoheptulonate synthase 0.14 TX73_002040 argininosuccinate synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_01349 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.76 H281DRAFT_04120 argininosuccinate synthase low > 103
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_01463 3-deoxy-7-phosphoheptulonate synthase 0.67 CCNA_00128 argininosuccinate synthase low > 67
Caulobacter crescentus NA1000 0.45 CCNA_01463 3-deoxy-7-phosphoheptulonate synthase 0.67 CCNA_00128 argininosuccinate synthase — —
Bifidobacterium breve UCC2003 0.44 BBR_RS19195 3-deoxy-7-phosphoheptulonate synthase 0.37 BBR_RS13915 argininosuccinate synthase low > 34
Castellaniella sp019104865 MT123 0.43 ABCV34_RS06825 3-deoxy-7-phosphoheptulonate synthase AroG 0.14 ABCV34_RS05390 argininosuccinate synthase — —

Not shown: 0 genomes with orthologs for PP_2324 only; 28 genomes with orthologs for PP_1088 only