| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_2324 | | tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase | 1.0 | PP_1025 | | 2-isopropylmalate synthase | 0.39 | 5 |
| Pseudomonas fluorescens FW300-N2E2 | 0.91 | Pf6N2E2_2470 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.91 | Pf6N2E2_3170 | | 2-isopropylmalate synthase (EC 2.3.3.13) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.91 | AO356_03200 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.91 | AO356_06550 | | 2-isopropylmalate synthase | 0.40 | 43 |
| Pseudomonas simiae WCS417 | 0.91 | PS417_08430 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.91 | PS417_23110 | | 2-isopropylmalate synthase | 0.48 | 4 |
| Pseudomonas fluorescens SBW25-INTG | 0.91 | PFLU_RS08380 | | 3-deoxy-7-phosphoheptulonate synthase | 0.91 | PFLU_RS24765 | | 2-isopropylmalate synthase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.91 | PFLU_RS08380 | | 3-deoxy-7-phosphoheptulonate synthase | 0.91 | PFLU_RS24765 | | 2-isopropylmalate synthase | low | > 109 |
| Pseudomonas sp. RS175 | 0.91 | PFR28_00962 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.91 | PFR28_00305 | | 2-isopropylmalate synthase | 0.25 | 83 |
| Pseudomonas fluorescens FW300-N2E3 | 0.91 | AO353_19030 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.91 | AO353_15925 | | 2-isopropylmalate synthase | 0.26 | 77 |
| Pseudomonas fluorescens FW300-N1B4 | 0.91 | Pf1N1B4_289 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.91 | Pf1N1B4_847 | | 2-isopropylmalate synthase (EC 2.3.3.13) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.90 | Psyr_2073 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | 0.91 | Psyr_1257 | | 2-isopropylmalate synthase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.90 | Psyr_2073 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | 0.91 | Psyr_1257 | | 2-isopropylmalate synthase | 0.44 | 36 |
| Pseudomonas fluorescens GW456-L13 | 0.90 | PfGW456L13_2224 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.91 | PfGW456L13_4854 | | 2-isopropylmalate synthase (EC 2.3.3.13) | low | > 87 |
| Pseudomonas sp. S08-1 | 0.89 | OH686_01760 | | 3-deoxy-7-phosphoheptulonate synthase | 0.78 | OH686_17570 | | 2-isopropylmalate synthase | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.86 | Psest_2331 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.83 | Psest_1277 | | 2-isopropylmalate synthase, yeast type | 0.43 | 20 |
| Marinobacter adhaerens HP15 | 0.73 | HP15_1814 | | phospho-2-dehydro-3-heoxyheptonate aldolase | 0.53 | HP15_2055 | | 2-isopropylmalate synthase | low | > 73 |
| Acinetobacter radioresistens SK82 | 0.69 | MPMX26_01673 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.62 | MPMX26_00404 | | 2-isopropylmalate synthase | low | > 36 |
| Dechlorosoma suillum PS | 0.62 | Dsui_2381 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.59 | Dsui_3227 | | 2-isopropylmalate synthase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.61 | CSW01_03635 | | 3-deoxy-7-phosphoheptulonate synthase | 0.11 | CSW01_12595 | | 2-isopropylmalate synthase | low | > 62 |
| Erwinia tracheiphila SCR3 | 0.59 | LU632_RS15450 | | 3-deoxy-7-phosphoheptulonate synthase | 0.10 | LU632_RS02880 | leuA | 2-isopropylmalate synthase | 0.51 | 21 |
| Shewanella loihica PV-4 | 0.58 | Shew_1067 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | 0.10 | Shew_3472 | | 2-isopropylmalate synthase (RefSeq) | 0.57 | 41 |
| Pantoea sp. MT58 | 0.58 | IAI47_04400 | | 3-deoxy-7-phosphoheptulonate synthase | 0.53 | IAI47_10235 | | 2-isopropylmalate synthase | low | > 76 |
| Serratia liquefaciens MT49 | 0.58 | IAI46_03955 | | 3-deoxy-7-phosphoheptulonate synthase | 0.58 | IAI46_09630 | | 2-isopropylmalate synthase | low | > 86 |
| Alteromonas macleodii MIT1002 | 0.58 | MIT1002_01314 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.11 | MIT1002_00949 | | 2-isopropylmalate synthase | low | > 70 |
| Pectobacterium carotovorum WPP14 | 0.57 | HER17_RS05375 | | 3-deoxy-7-phosphoheptulonate synthase | 0.09 | HER17_RS03085 | | 2-isopropylmalate synthase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.57 | HGI48_RS16260 | | 3-deoxy-7-phosphoheptulonate synthase | 0.11 | HGI48_RS18055 | | 2-isopropylmalate synthase | — | — |
| Dickeya dadantii 3937 | 0.57 | DDA3937_RS16140 | | 3-deoxy-7-phosphoheptulonate synthase | 0.52 | DDA3937_RS02895 | | 2-isopropylmalate synthase | — | — |
| Dickeya dianthicola ME23 | 0.57 | DZA65_RS17355 | | 3-deoxy-7-phosphoheptulonate synthase | 0.11 | DZA65_RS19200 | | 2-isopropylmalate synthase | — | — |
| Escherichia coli ECOR27 | 0.57 | NOLOHH_12890 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.09 | NOLOHH_03060 | | 2-isopropylmalate synthase | 0.58 | 32 |
| Escherichia fergusonii Becca | 0.57 | EFB2_01291 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.09 | EFB2_03971 | | 2-isopropylmalate synthase | low | > 86 |
| Shewanella sp. ANA-3 | 0.57 | Shewana3_3013 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | 0.10 | Shewana3_3761 | | 2-isopropylmalate synthase (RefSeq) | 0.78 | 24 |
| Escherichia coli Nissle 1917 | 0.57 | ECOLIN_RS14705 | | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.09 | ECOLIN_RS00400 | | 2-isopropylmalate synthase | low | > 52 |
| Escherichia coli ECRC62 | 0.57 | BNILDI_11695 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.09 | BNILDI_08550 | | 2-isopropylmalate synthase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.57 | OHPLBJKB_01107 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.09 | OHPLBJKB_03583 | | 2-isopropylmalate synthase | low | > 73 |
| Escherichia coli BL21 | 0.57 | ECD_02490 | | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible | 0.09 | ECD_00076 | | 2-isopropylmalate synthase | low | > 60 |
| Enterobacter sp. TBS_079 | 0.57 | MPMX20_03469 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.56 | MPMX20_03565 | | 2-isopropylmalate synthase | low | > 85 |
| Rahnella sp. WP5 | 0.57 | EX31_RS07595 | | 3-deoxy-7-phosphoheptulonate synthase | 0.57 | EX31_RS24130 | | 2-isopropylmalate synthase | low | > 89 |
| Escherichia coli ECOR38 | 0.57 | HEPCGN_20335 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.09 | HEPCGN_08695 | | 2-isopropylmalate synthase | low | > 85 |
| Escherichia coli ECRC101 | 0.57 | MCAODC_11745 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.09 | MCAODC_01230 | | 2-isopropylmalate synthase | — | — |
| Escherichia coli ECRC102 | 0.57 | NIAGMN_18985 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.09 | NIAGMN_08565 | | 2-isopropylmalate synthase | — | — |
| Escherichia coli ECRC98 | 0.57 | JDDGAC_24880 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.09 | JDDGAC_14310 | | 2-isopropylmalate synthase | — | — |
| Escherichia coli BW25113 | 0.57 | b2601 | aroF | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible (NCBI) | 0.09 | b0074 | leuA | 2-isopropylmalate synthase (NCBI) | 0.74 | 42 |
| Escherichia coli ECRC99 | 0.57 | KEDOAH_07005 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.09 | KEDOAH_17440 | | 2-isopropylmalate synthase | — | — |
| Escherichia coli ECRC101 | 0.57 | OKFHMN_21215 | aroF | 3-deoxy-7-phosphoheptulonate synthase AroF | 0.09 | OKFHMN_10715 | | 2-isopropylmalate synthase | — | — |
| Enterobacter asburiae PDN3 | 0.57 | EX28DRAFT_2702 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) | 0.57 | EX28DRAFT_2770 | | 2-isopropylmalate synthase, yeast type | low | > 76 |
| Klebsiella michiganensis M5al | 0.56 | BWI76_RS21480 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.55 | BWI76_RS22105 | | 2-isopropylmalate synthase | low | > 92 |
| Shewanella oneidensis MR-1 | 0.56 | SO1361 | aroF | phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive (NCBI ptt file) | 0.10 | SO4236 | leuA | 2-isopropylmalate synthase (NCBI ptt file) | 0.75 | 15 |
| Shewanella amazonensis SB2B | 0.54 | Sama_0893 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | 0.10 | Sama_0335 | | 2-isopropylmalate synthase (RefSeq) | 0.79 | 9 |
| Synechococcus elongatus PCC 7942 | 0.53 | Synpcc7942_2501 | aroF | phospho-2-dehydro-3-heoxyheptonate aldolase | 0.09 | Synpcc7942_1410 | leuA | 2-isopropylmalate synthase | — | — |
| Acidovorax sp. GW101-3H11 | 0.48 | Ac3H11_4034 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.55 | Ac3H11_5000 | | 2-isopropylmalate synthase (EC 2.3.3.13) | low | > 79 |
| Herbaspirillum seropedicae SmR1 | 0.48 | HSERO_RS07160 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.66 | HSERO_RS17185 | | 2-isopropylmalate synthase | 0.92 | 5 |
| Variovorax sp. SCN45 | 0.48 | GFF4447 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) | 0.60 | GFF1164 | | 2-isopropylmalate synthase (EC 2.3.3.13) | 0.91 | 42 |
| Rhodanobacter denitrificans MT42 | 0.48 | LRK55_RS02485 | | 3-deoxy-7-phosphoheptulonate synthase | 0.10 | LRK55_RS09985 | | 2-isopropylmalate synthase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.48 | LRK54_RS02730 | | 3-deoxy-7-phosphoheptulonate synthase | 0.10 | LRK54_RS10345 | | 2-isopropylmalate synthase | 0.23 | 38 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.47 | GFF581 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.62 | GFF4280 | | 2-isopropylmalate synthase (EC 2.3.3.13) | low | > 90 |
| Ralstonia solanacearum UW163 | 0.47 | UW163_RS00610 | | 3-deoxy-7-phosphoheptulonate synthase | 0.65 | UW163_RS17345 | | 2-isopropylmalate synthase | — | — |
| Variovorax sp. OAS795 | 0.47 | ABID97_RS06345 | | 3-deoxy-7-phosphoheptulonate synthase | 0.60 | ABID97_RS14905 | | 2-isopropylmalate synthase | low | > 91 |
| Ralstonia solanacearum IBSBF1503 | 0.47 | RALBFv3_RS12955 | | 3-deoxy-7-phosphoheptulonate synthase | 0.65 | RALBFv3_RS21840 | | 2-isopropylmalate synthase | low | > 76 |
| Rhodanobacter sp. FW510-T8 | 0.47 | OKGIIK_09785 | | 3-deoxy-7-phosphoheptulonate synthase | 0.09 | OKGIIK_13575 | leuA | 2-isopropylmalate synthase | low | > 52 |
| Cupriavidus basilensis FW507-4G11 | 0.47 | RR42_RS05860 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.62 | RR42_RS21205 | | 2-isopropylmalate synthase | low | > 128 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.47 | Xcc-8004.704.1 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) | 0.10 | Xcc-8004.1056.1 | | 2-isopropylmalate synthase (EC 2.3.3.13) | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.47 | ABZR86_RS00390 | | 3-deoxy-7-phosphoheptulonate synthase | 0.09 | ABZR86_RS15970 | | 2-isopropylmalate synthase | 0.57 | 47 |
| Ralstonia sp. UNC404CL21Col | 0.47 | ABZR87_RS12205 | | 3-deoxy-7-phosphoheptulonate synthase | 0.63 | ABZR87_RS22365 | | 2-isopropylmalate synthase | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS13320 | | 3-deoxy-7-phosphoheptulonate synthase | 0.63 | RS_RS18695 | | 2-isopropylmalate synthase 2 | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.46 | RPSI07_RS11845 | | 3-deoxy-7-phosphoheptulonate synthase | 0.64 | RPSI07_RS01320 | | 2-isopropylmalate synthase | — | — |
| Paraburkholderia graminis OAS925 | 0.46 | ABIE53_003992 | | 3-deoxy-7-phosphoheptulonate synthase | 0.63 | ABIE53_002867 | | 2-isopropylmalate synthase | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS26560 | | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.57 | QEN71_RS01640 | | 2-isopropylmalate synthase | low | > 153 |
| Rhodopseudomonas palustris CGA009 | 0.45 | TX73_000140 | | 3-deoxy-7-phosphoheptulonate synthase | 0.58 | TX73_024250 | | 2-isopropylmalate synthase | low | > 86 |
| Burkholderia phytofirmans PsJN | 0.45 | BPHYT_RS23245 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.64 | BPHYT_RS13280 | | 2-isopropylmalate synthase | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_01349 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | 0.63 | H281DRAFT_00385 | | 2-isopropylmalate synthase | low | > 103 |
| Caulobacter crescentus NA1000 | 0.45 | CCNA_01463 | | 3-deoxy-7-phosphoheptulonate synthase | 0.11 | CCNA_01610 | | 2-isopropylmalate synthase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.45 | CCNA_01463 | | 3-deoxy-7-phosphoheptulonate synthase | 0.11 | CCNA_01610 | | 2-isopropylmalate synthase | low | > 67 |
| Bifidobacterium breve UCC2003 | 0.44 | BBR_RS19195 | | 3-deoxy-7-phosphoheptulonate synthase | 0.50 | BBR_RS11170 | | 2-isopropylmalate synthase | low | > 34 |
| Castellaniella sp019104865 MT123 | 0.43 | ABCV34_RS06825 | | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.61 | ABCV34_RS12420 | | 2-isopropylmalate synthase | — | — |
Not shown: 2 genomes with orthologs for PP_2324 only; 23 genomes with orthologs for PP_1025 only