Conservation of cofitness between PP_4922 and PP_0735 in Pseudomonas putida KT2440

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4922 Phosphomethylpyrimidine synthase 1.0 PP_0735 molybdopterin-synthase adenylyltransferase 0.65 8
Pseudomonas sp. RS175 0.92 PFR28_05091 Phosphomethylpyrimidine synthase 0.83 PFR28_03653 Molybdopterin-synthase adenylyltransferase 0.86 4
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.88 Pf6N2E2_5223 Molybdopterin biosynthesis protein MoeB 0.36 17
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_08810 thiamine biosynthesis protein ThiC 0.84 AO356_16505 molybdopterin-synthase adenylyltransferase 0.21 77
Pseudomonas fluorescens SBW25 0.92 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.82 PFLU_RS03665 molybdopterin-synthase adenylyltransferase MoeB 0.79 31
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.82 PFLU_RS03665 molybdopterin-synthase adenylyltransferase MoeB 0.69 4
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.89 PfGW456L13_1584 Molybdopterin biosynthesis protein MoeB 0.66 6
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_0544 hydroxymethylpyrimidine synthase 0.83 Psyr_0951 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_0544 hydroxymethylpyrimidine synthase 0.83 Psyr_0951 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB low > 86
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_13010 thiamine biosynthesis protein ThiC 0.84 AO353_14795 molybdopterin-synthase adenylyltransferase 0.57 11
Pseudomonas simiae WCS417 0.91 PS417_02355 thiamine biosynthesis protein ThiC 0.81 PS417_03615 molybdopterin-synthase adenylyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.82 Pf1N1B4_2921 Molybdopterin biosynthesis protein MoeB — —
Pseudomonas sp. S08-1 0.91 OH686_15885 phosphomethylpyrimidine synthase 0.79 OH686_07900 Molybdopterin-synthase adenylyltransferase 0.74 68
Pseudomonas stutzeri RCH2 0.90 Psest_0477 thiamine biosynthesis protein ThiC 0.84 Psest_1115 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 0.41 17
Marinobacter adhaerens HP15 0.83 HP15_453 thiamine biosynthesis protein thiC 0.58 HP15_714 molybdopterin synthase sulfurylase MoeB — —
Paraburkholderia sabiae LMG 24235 0.78 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.52 QEN71_RS01435 molybdopterin-synthase adenylyltransferase MoeB — —
Herbaspirillum seropedicae SmR1 0.78 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC 0.59 HSERO_RS00835 molybdopterin biosynthesis protein MoeB 0.77 4
Dechlorosoma suillum PS 0.77 Dsui_0422 thiamine biosynthesis protein ThiC 0.57 Dsui_1268 dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis — —
Acinetobacter radioresistens SK82 0.77 MPMX26_00180 Phosphomethylpyrimidine synthase 0.32 MPMX26_01181 Molybdopterin-synthase adenylyltransferase low > 36
Paraburkholderia graminis OAS925 0.77 ABIE53_002857 phosphomethylpyrimidine synthase 0.53 ABIE53_000661 molybdopterin/thiamine biosynthesis adenylyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.77 H281DRAFT_00395 hydroxymethylpyrimidine synthase 0.53 H281DRAFT_02006 Molybdopterin or thiamine biosynthesis adenylyltransferase — —
Burkholderia phytofirmans PsJN 0.77 BPHYT_RS13220 phosphomethylpyrimidine synthase 0.52 BPHYT_RS02580 molybdopterin biosynthesis protein MoeB — —
Castellaniella sp019104865 MT123 0.75 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC 0.56 ABCV34_RS14285 HesA/MoeB/ThiF family protein — —
Pectobacterium carotovorum WPP14 0.74 HER17_RS20380 phosphomethylpyrimidine synthase ThiC 0.45 HER17_RS20390 HesA/MoeB/ThiF family protein 0.93 7
Ralstonia sp. UNC404CL21Col 0.74 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC 0.46 ABZR87_RS06740 molybdopterin-synthase adenylyltransferase MoeB — —
Ralstonia solanacearum PSI07 0.74 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC 0.46 RPSI07_RS22420 molybdopterin-synthase adenylyltransferase MoeB — —
Ralstonia solanacearum IBSBF1503 0.74 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC 0.47 RALBFv3_RS10890 molybdopterin-synthase adenylyltransferase MoeB — —
Ralstonia solanacearum UW163 0.74 UW163_RS03640 phosphomethylpyrimidine synthase ThiC 0.47 UW163_RS02690 molybdopterin-synthase adenylyltransferase MoeB — —
Ralstonia solanacearum GMI1000 0.74 RS_RS00555 phosphomethylpyrimidine synthase 0.47 RS_RS01730 molybdopterin-synthase adenylyltransferase MoeB — —
Shewanella loihica PV-4 0.74 Shew_2096 thiamine biosynthesis protein ThiC (RefSeq) 0.52 Shew_0047 molybdopterin biosynthesis protein MoeB (RefSeq) low > 60
Pantoea sp. MT58 0.73 IAI47_18085 phosphomethylpyrimidine synthase ThiC 0.50 IAI47_13145 molybdopterin-synthase adenylyltransferase MoeB low > 76
Dickeya dadantii 3937 0.73 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC 0.53 DDA3937_RS08470 molybdopterin-synthase adenylyltransferase MoeB low > 74
Cupriavidus basilensis FW507-4G11 0.73 RR42_RS01290 thiamine biosynthesis protein ThiC 0.44 RR42_RS01815 molybdopterin biosynthesis protein MoeB — —
Rahnella sp. WP5 0.73 EX31_RS16815 phosphomethylpyrimidine synthase ThiC 0.51 EX31_RS18770 molybdopterin-synthase adenylyltransferase MoeB low > 89
Serratia liquefaciens MT49 0.73 IAI46_01320 phosphomethylpyrimidine synthase ThiC 0.54 IAI46_07825 molybdopterin-synthase adenylyltransferase MoeB low > 86
Escherichia fergusonii Becca 0.72 EFB2_04617 Phosphomethylpyrimidine synthase 0.51 EFB2_03280 Molybdopterin-synthase adenylyltransferase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_04056 Phosphomethylpyrimidine synthase 0.50 OHPLBJKB_02886 Molybdopterin-synthase adenylyltransferase low > 73
Escherichia coli ECRC62 0.72 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC 0.51 BNILDI_20750 moeB molybdopterin-synthase adenylyltransferase MoeB — —
Escherichia coli BW25113 0.72 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) 0.54 b0826 moeB molybdopterin biosynthesis protein MoeB (NCBI) low > 76
Escherichia coli ECOR27 0.72 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC 0.51 NOLOHH_22475 moeB molybdopterin-synthase adenylyltransferase MoeB low > 57
Escherichia coli Nissle 1917 0.72 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC 0.51 ECOLIN_RS04395 molybdopterin-synthase adenylyltransferase MoeB low > 52
Escherichia coli ECRC98 0.72 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC 0.50 JDDGAC_09755 moeB molybdopterin-synthase adenylyltransferase MoeB — —
Erwinia tracheiphila SCR3 0.72 LU632_RS00970 thiC phosphomethylpyrimidine synthase ThiC 0.48 LU632_RS00960 HesA/MoeB/ThiF family protein low > 74
Dickeya dianthicola 67-19 0.72 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC 0.53 HGI48_RS08635 molybdopterin-synthase adenylyltransferase MoeB low > 71
Escherichia coli ECRC101 0.72 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC 0.50 MCAODC_25335 moeB molybdopterin-synthase adenylyltransferase MoeB — —
Escherichia coli ECRC101 0.72 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC 0.50 OKFHMN_06120 moeB molybdopterin-synthase adenylyltransferase MoeB — —
Escherichia coli ECRC99 0.72 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC 0.50 KEDOAH_21790 moeB molybdopterin-synthase adenylyltransferase MoeB — —
Escherichia coli ECRC102 0.72 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC 0.50 NIAGMN_04165 moeB molybdopterin-synthase adenylyltransferase MoeB — —
Shewanella amazonensis SB2B 0.72 Sama_1860 thiamine biosynthesis protein ThiC (RefSeq) 0.49 Sama_0137 molybdopterin biosynthesis protein MoeB (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.72 B158DRAFT_0295 hydroxymethylpyrimidine synthase 0.52 B158DRAFT_1711 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 0.97 2
Enterobacter sp. TBS_079 0.72 MPMX20_00217 Phosphomethylpyrimidine synthase 0.46 MPMX20_01466 Molybdopterin-synthase adenylyltransferase low > 85
Dickeya dianthicola ME23 0.72 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC 0.53 DZA65_RS08925 molybdopterin-synthase adenylyltransferase MoeB low > 75
Escherichia coli ECOR38 0.72 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC 0.55 HEPCGN_01915 moeB molybdopterin-synthase adenylyltransferase MoeB low > 85
Escherichia coli BL21 0.72 ECD_03871 phosphomethylpyrimidine synthase 0.50 ECD_00793 molybdopterin synthase sulfurylase low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF4198 Thiamin biosynthesis protein ThiC 0.49 GFF724 Molybdopterin biosynthesis protein MoeB low > 78
Enterobacter asburiae PDN3 0.72 EX28DRAFT_4536 phosphomethylpyrimidine synthase 0.46 EX28DRAFT_2138 molybdopterin synthase sulfurylase MoeB low > 76
Klebsiella michiganensis M5al 0.71 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC 0.45 BWI76_RS09080 molybdopterin-synthase adenylyltransferase MoeB low > 92
Alteromonas macleodii MIT1002 0.71 MIT1002_00097 Phosphomethylpyrimidine synthase 0.33 MIT1002_02331 Molybdopterin-synthase adenylyltransferase low > 70
Shewanella oneidensis MR-1 0.71 SO2445 thiC thiamin biosynthesis protein ThiC (NCBI ptt file) 0.48 SO0137 moeB molybdopterin biosynthesis MoeB protein (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_00335 phosphomethylpyrimidine synthase 0.46 CSW01_17300 molybdopterin-synthase adenylyltransferase MoeB low > 62
Shewanella sp. ANA-3 0.70 Shewana3_1936 thiamine biosynthesis protein ThiC (RefSeq) 0.49 Shewana3_0130 molybdopterin biosynthesis protein MoeB (RefSeq) low > 73
Variovorax sp. SCN45 0.69 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.55 GFF2567 Molybdopterin-synthase adenylyltransferase (EC 2.7.7.80) 0.91 1
Magnetospirillum magneticum AMB-1 0.69 AMB_RS01125 phosphomethylpyrimidine synthase 0.39 AMB_RS01000 molybdopterin-synthase adenylyltransferase MoeB — —
Variovorax sp. OAS795 0.68 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC 0.51 ABID97_RS07375 molybdopterin-synthase adenylyltransferase MoeB low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.68 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.50 GFF1228 Sulfur carrier protein adenylyltransferase ThiF low > 90
Acidovorax sp. GW101-3H11 0.67 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.53 Ac3H11_3854 Sulfur carrier protein adenylyltransferase ThiF — —
Azospirillum brasilense Sp245 0.67 AZOBR_RS07940 phosphomethylpyrimidine synthase 0.39 AZOBR_RS01090 thiamine biosynthesis protein ThiF low > 97
Caulobacter crescentus NA1000 0.66 CCNA_02109 thiamine biosynthesis protein thiC 0.38 CCNA_03842 molybdopterin biosynthesis protein MoeB — —
Caulobacter crescentus NA1000 Δfur 0.66 CCNA_02109 thiamine biosynthesis protein thiC 0.38 CCNA_03842 molybdopterin biosynthesis protein MoeB — —
Agrobacterium fabrum C58 0.65 Atu2569 thiamine biosynthesis protein 0.38 Atu0074 molybdopterin biosynthesis protein low > 89
Sinorhizobium meliloti 1021 0.65 SM_b20615 thiamine biosynthesis protein ThiC 0.40 SMc02864 molybdopterin biosynthesis protein MoeB low > 103
Rhodopseudomonas palustris CGA009 0.65 TX73_018540 phosphomethylpyrimidine synthase ThiC 0.43 TX73_000445 molybdopterin-synthase adenylyltransferase MoeB — —
Azospirillum sp. SherDot2 0.64 MPMX19_00336 Phosphomethylpyrimidine synthase 0.40 MPMX19_00239 putative adenylyltransferase/sulfurtransferase MoeZ low > 112
Sphingomonas koreensis DSMZ 15582 0.64 Ga0059261_2424 hydroxymethylpyrimidine synthase 0.40 Ga0059261_3578 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 — —
Bosea sp. OAE506 0.63 ABIE41_RS02770 phosphomethylpyrimidine synthase ThiC 0.36 ABIE41_RS03340 molybdopterin-synthase adenylyltransferase MoeB — —
Brevundimonas sp. GW460-12-10-14-LB2 0.63 A4249_RS15715 phosphomethylpyrimidine synthase ThiC 0.47 A4249_RS12380 molybdopterin-synthase adenylyltransferase MoeB — —
Rhodospirillum rubrum S1H 0.61 Rru_A2008 Thiamine biosynthesis protein ThiC (NCBI) 0.45 Rru_A3793 molybdopterin biosynthesis protein (NCBI) — —
Bacteroides ovatus ATCC 8483 0.58 BACOVA_02358 thiamine biosynthesis protein ThiC 0.34 BACOVA_02356 ThiF family protein 0.94 3
Bacteroides thetaiotaomicron VPI-5482 0.58 BT0650 thiamine biosynthesis protein ThiC (NCBI ptt file) 0.34 BT0648 molybdopterin biosynthesis protein (NCBI ptt file) 0.61 1
Phocaeicola dorei CL03T12C01 0.58 ABI39_RS17760 phosphomethylpyrimidine synthase ThiC 0.34 ABI39_RS17780 HesA/MoeB/ThiF family protein 0.87 3
Phocaeicola vulgatus CL09T03C04 0.58 HMPREF1058_RS03280 phosphomethylpyrimidine synthase ThiC 0.33 HMPREF1058_RS03260 HesA/MoeB/ThiF family protein 0.94 3
Bacteroides stercoris CC31F 0.58 HMPREF1181_RS14685 phosphomethylpyrimidine synthase ThiC 0.33 HMPREF1181_RS14695 HesA/MoeB/ThiF family protein 0.51 7

Not shown: 12 genomes with orthologs for PP_4922 only; 4 genomes with orthologs for PP_0735 only