Conservation of cofitness between HSERO_RS09575 and HSERO_RS23345 in Herbaspirillum seropedicae SmR1

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS09575 septum formation inhibitor Maf 1.0 HSERO_RS23345 16S rRNA methyltransferase 0.25 19
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS14130 septum formation inhibitor Maf 0.47 RR42_RS19740 16S rRNA methyltransferase low > 128
Paraburkholderia graminis OAS925 0.57 ABIE53_003053 septum formation protein 0.47 ABIE53_000470 16S rRNA (cytidine1402-2'-O)-methyltransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_04345 septum formation protein 0.50 H281DRAFT_02152 16S rRNA (cytidine1402-2'-O)-methyltransferase low > 103
Ralstonia solanacearum PSI07 0.55 RPSI07_RS19060 septum formation protein Maf 0.49 RPSI07_RS08730 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Ralstonia solanacearum IBSBF1503 0.55 RALBFv3_RS14400 septum formation protein Maf 0.49 RALBFv3_RS08495 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 76
Ralstonia solanacearum UW163 0.55 UW163_RS11865 septum formation protein Maf 0.49 UW163_RS05115 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Ralstonia solanacearum GMI1000 0.54 RS_RS05180 septum formation protein Maf 0.48 RS_RS16360 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS10115 Maf-like protein 0.48 ABZR87_RS03815 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS04525 Maf-like protein 0.55 QEN71_RS00655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.85 25
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS14455 septum formation protein Maf 0.53 BPHYT_RS01940 16S rRNA methyltransferase low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF3328 Septum formation protein Maf 0.36 GFF2715 rRNA small subunit methyltransferase I — —
Lysobacter sp. OAE881 0.47 ABIE51_RS13975 Maf family nucleotide pyrophosphatase 0.40 ABIE51_RS04695 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 62
Dechlorosoma suillum PS 0.46 Dsui_2442 MAF protein 0.53 Dsui_0251 putative S-adenosylmethionine-dependent methyltransferase, YraL family low > 51
Acidovorax sp. GW101-3H11 0.44 Ac3H11_1584 Septum formation protein Maf 0.42 Ac3H11_4466 rRNA small subunit methyltransferase I — —
Marinobacter adhaerens HP15 0.43 HP15_2218 Maf-like protein 0.44 HP15_554 tetrapyrrole methylase family protein low > 73
Castellaniella sp019104865 MT123 0.42 ABCV34_RS08400 Maf family nucleotide pyrophosphatase 0.43 ABCV34_RS14320 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 48
Variovorax sp. SCN45 0.42 GFF3853 Septum formation protein Maf 0.42 GFF3735 16S rRNA (cytidine(1402)-2'-O)-methyltransferase (EC 2.1.1.198) — —
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_1759 MAF protein 0.37 B158DRAFT_2109 probable S-adenosylmethionine-dependent methyltransferase, YraL family low > 40
Shewanella sp. ANA-3 0.41 Shewana3_2564 maf protein (RefSeq) 0.40 Shewana3_3879 hypothetical protein (RefSeq) low > 73
Serratia liquefaciens MT49 0.41 IAI46_09760 septum formation inhibitor Maf 0.40 IAI46_22295 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 86
Variovorax sp. OAS795 0.40 ABID97_RS08280 Maf family nucleotide pyrophosphatase 0.42 ABID97_RS00285 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Pectobacterium carotovorum WPP14 0.40 HER17_RS08620 Maf-like protein 0.44 HER17_RS19860 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 75
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.4001.1 FIG146278: Maf/YceF/YhdE family protein 0.39 Xcc-8004.4371.1 rRNA small subunit methyltransferase I low > 74
Shewanella oneidensis MR-1 0.40 SO2782 maf protein, putative (NCBI ptt file) 0.42 SO0301 hypothetical methyltransferase (NCBI ptt file) low > 76
Enterobacter sp. TBS_079 0.39 MPMX20_01767 7-methyl-GTP pyrophosphatase 0.39 MPMX20_04050 Ribosomal RNA small subunit methyltransferase I low > 85
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_05685 7-methyl-GTP pyrophosphatase 0.35 OKGIIK_11735 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF3369 FIG146278: Maf/YceF/YhdE family protein 0.40 GFF1521 rRNA small subunit methyltransferase I low > 78
Pantoea sp. MT58 0.38 IAI47_12100 septum formation inhibitor Maf 0.41 IAI47_02850 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 76
Erwinia tracheiphila SCR3 0.38 LU632_RS14850 Maf-like protein 0.43 LU632_RS02230 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_02579 Maf-like protein YceF 0.42 OHPLBJKB_00555 Ribosomal RNA small subunit methyltransferase I low > 73
Escherichia coli ECRC62 0.37 BNILDI_19300 yceF 7-methyl-GTP pyrophosphatase 0.42 BNILDI_01495 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 75
Escherichia coli ECOR27 0.37 NOLOHH_21140 yceF 7-methyl-GTP pyrophosphatase 0.42 NOLOHH_10035 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 75
Pseudomonas simiae WCS417 0.37 PS417_21465 septum formation inhibitor Maf 0.44 PS417_04590 methyltransferase low > 88
Escherichia coli BW25113 0.37 b1087 yceF orf, hypothetical protein (VIMSS) 0.42 b3146 yraL predicted methyltransferase (NCBI) low > 76
Escherichia coli ECRC99 0.37 KEDOAH_24145 yceF 7-methyl-GTP pyrophosphatase 0.42 KEDOAH_09915 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Escherichia coli BL21 0.37 ECD_01083 m(7)GTP pyrophosphatase 0.42 ECD_03013 16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent low > 61
Escherichia coli ECRC102 0.37 NIAGMN_24220 yceF 7-methyl-GTP pyrophosphatase 0.42 NIAGMN_15995 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Escherichia fergusonii Becca 0.37 EFB2_02888 7-methyl-GTP pyrophosphatase 0.42 EFB2_00677 Ribosomal RNA small subunit methyltransferase I low > 86
Escherichia coli ECRC101 0.37 MCAODC_22970 yceF 7-methyl-GTP pyrophosphatase 0.42 MCAODC_08755 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 87
Escherichia coli ECOR38 0.37 HEPCGN_23870 yceF 7-methyl-GTP pyrophosphatase 0.42 HEPCGN_17110 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 87
Escherichia coli ECRC98 0.37 JDDGAC_07270 yceF 7-methyl-GTP pyrophosphatase 0.42 JDDGAC_21860 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 86
Escherichia coli ECRC100 0.37 OKFHMN_03610 yceF 7-methyl-GTP pyrophosphatase 0.42 OKFHMN_18235 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 80
Dickeya dadantii 3937 0.37 DDA3937_RS13150 septum formation inhibitor Maf 0.42 DDA3937_RS01715 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 74
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_10125 maf-like protein 0.42 CSW01_03090 rRNA (cytidine-2'-O-)-methyltransferase low > 62
Shewanella amazonensis SB2B 0.37 Sama_1986 septum formation protein Maf (RefSeq) 0.41 Sama_3353 hypothetical protein (RefSeq) low > 62
Enterobacter asburiae PDN3 0.36 EX28DRAFT_1843 MAF protein 0.39 EX28DRAFT_3195 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 76
Escherichia coli Nissle 1917 0.36 ECOLIN_RS06285 7-methyl-GTP pyrophosphatase 0.42 ECOLIN_RS18085 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 55
Dickeya dianthicola ME23 0.36 DZA65_RS13685 septum formation inhibitor Maf 0.42 DZA65_RS01685 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 75
Pseudomonas stutzeri RCH2 0.36 Psest_1683 MAF protein 0.44 Psest_3270 probable S-adenosylmethionine-dependent methyltransferase, YraL family low > 67
Rahnella sp. WP5 0.36 EX31_RS24405 septum formation inhibitor Maf 0.44 EX31_RS12550 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 89
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_20140 septum formation inhibitor Maf 0.44 AO356_17110 methyltransferase low > 104
Pseudomonas sp. S08-1 0.36 OH686_22110 septum formation protein Maf 0.44 OH686_08340 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 80
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_01390 septum formation inhibitor Maf 0.45 AO353_15290 methyltransferase low > 101
Shewanella loihica PV-4 0.35 Shew_1597 maf protein (RefSeq) 0.43 Shew_0228 uroporphyrin-III C/tetrapyrrole methyltransferase (RefSeq) low > 60
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS23080 septum formation inhibitor Maf 0.44 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 109
Pseudomonas fluorescens SBW25 0.35 PFLU_RS23080 septum formation inhibitor Maf 0.44 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 109
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS06200 Maf family nucleotide pyrophosphatase 0.38 ABZR86_RS11380 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 74
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_5947 FIG146278: Maf/YceF/YhdE family protein 0.45 Pf6N2E2_5346 rRNA small subunit methyltransferase I low > 103
Dickeya dianthicola 67-19 0.35 HGI48_RS13215 septum formation inhibitor Maf 0.42 HGI48_RS01610 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 71
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS01215 Maf family nucleotide pyrophosphatase 0.37 LRK54_RS12190 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 59
Rhodanobacter denitrificans MT42 0.35 LRK55_RS00990 Maf family protein 0.37 LRK55_RS11925 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 63
Pseudomonas sp. RS175 0.35 PFR28_03015 7-methyl-GTP pyrophosphatase 0.45 PFR28_03597 Ribosomal RNA small subunit methyltransferase I low > 88
Alteromonas macleodii MIT1002 0.34 MIT1002_01727 Maf-like protein YceF 0.36 MIT1002_03113 Ribosomal RNA small subunit methyltransferase I low > 70
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_456 FIG146278: Maf/YceF/YhdE family protein 0.44 Pf1N1B4_953 rRNA small subunit methyltransferase I — —
Klebsiella michiganensis M5al 0.34 BWI76_RS11060 septum formation inhibitor Maf 0.39 BWI76_RS24910 rRNA (cytidine-2'-O-)-methyltransferase low > 92
Pseudomonas putida KT2440 0.34 PP_1909 putative septum formation protein 0.42 PP_1326 16S rRNA 2'-O-ribose C1402 methyltransferase 0.27 78
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_2100 FIG146278: Maf/YceF/YhdE family protein 0.43 PfGW456L13_1643 rRNA small subunit methyltransferase I low > 87
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_1642 Maf-like protein 0.45 Psyr_4112 Protein of unknown function UPF0011 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_1642 Maf-like protein 0.45 Psyr_4112 Protein of unknown function UPF0011 low > 86
Acinetobacter radioresistens SK82 0.30 MPMX26_01735 7-methyl-GTP pyrophosphatase 0.38 MPMX26_02282 Ribosomal RNA small subunit methyltransferase I low > 36
Brevundimonas sp. GW460-12-10-14-LB2 0.20 A4249_RS13665 Maf family protein 0.28 A4249_RS13300 16S rRNA (cytidine(1402)-2'-O)-methyltransferase — —
Synechococcus elongatus PCC 7942 0.20 Synpcc7942_0209 maf Maf-like protein 0.36 Synpcc7942_0174 hypothetical protein low > 38
Rhizobium sp. OAE497 0.18 ABIE40_RS19245 Maf-like protein 0.35 ABIE40_RS01370 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 107
Rhodospirillum rubrum S1H 0.18 Rru_A3614 Maf-like protein (NCBI) 0.29 Rru_A3693 Protein of unknown function UPF0011 (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.18 AMB_RS23015 septum formation protein Maf 0.35 AMB_RS22780 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 64
Sinorhizobium meliloti 1021 0.16 SMc02792 Maf-like protein 0.36 SMc00416 hypothetical protein — —
Bosea sp. OAE506 0.16 ABIE41_RS04655 Maf family protein 0.30 ABIE41_RS03315 16S rRNA (cytidine(1402)-2'-O)-methyltransferase low > 77

Not shown: 0 genomes with orthologs for HSERO_RS09575 only; 10 genomes with orthologs for HSERO_RS23345 only