| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pectobacterium carotovorum WPP14 | 1.0 | HER17_RS17265 | | oxygen-dependent coproporphyrinogen oxidase | 1.0 | HER17_RS12400 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.92 | 6 |
| Dickeya dadantii 3937 | 0.81 | DDA3937_RS04365 | | oxygen-dependent coproporphyrinogen oxidase | 0.94 | DDA3937_RS09560 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Rahnella sp. WP5 | 0.80 | EX31_RS20260 | | oxygen-dependent coproporphyrinogen oxidase | 0.92 | EX31_RS18560 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 89 |
| Dickeya dianthicola 67-19 | 0.80 | HGI48_RS04355 | | oxygen-dependent coproporphyrinogen oxidase | 0.94 | HGI48_RS09575 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.58 | 44 |
| Dickeya dianthicola ME23 | 0.79 | DZA65_RS04275 | | oxygen-dependent coproporphyrinogen oxidase | 0.94 | DZA65_RS09885 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Serratia liquefaciens MT49 | 0.78 | IAI46_18545 | | oxygen-dependent coproporphyrinogen oxidase | 0.93 | IAI46_08515 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Pantoea sp. MT58 | 0.76 | IAI47_05360 | | oxygen-dependent coproporphyrinogen oxidase | 0.91 | IAI47_12945 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Erwinia tracheiphila SCR3 | 0.75 | LU632_RS06720 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.88 | LU632_RS09705 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.73 | GFF2066 | | Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) | 0.91 | GFF4901 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 78 |
| Escherichia coli ECRC62 | 0.73 | BNILDI_12640 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.92 | BNILDI_20435 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 75 |
| Escherichia coli ECOR27 | 0.73 | NOLOHH_13775 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.92 | NOLOHH_22180 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 75 |
| Escherichia coli Nissle 1917 | 0.73 | ECOLIN_RS13965 | | oxygen-dependent coproporphyrinogen oxidase | 0.92 | ECOLIN_RS04695 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 55 |
| Escherichia coli BL21 | 0.73 | ECD_02336 | | coproporphyrinogen III oxidase | 0.91 | ECD_00887 | | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity | low | > 61 |
| Escherichia coli BW25113 | 0.73 | b2436 | hemF | coproporphyrinogen III oxidase (NCBI) | 0.92 | b0882 | clpA | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.73 | OHPLBJKB_01286 | | Oxygen-dependent coproporphyrinogen-III oxidase | 0.92 | OHPLBJKB_02786 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 73 |
| Escherichia coli ECOR38 | 0.73 | HEPCGN_21270 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.92 | HEPCGN_22900 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 87 |
| Enterobacter sp. TBS_079 | 0.72 | MPMX20_03323 | | Oxygen-dependent coproporphyrinogen-III oxidase | 0.91 | MPMX20_01544 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 85 |
| Shewanella loihica PV-4 | 0.72 | Shew_3729 | | coproporphyrinogen III oxidase (RefSeq) | 0.72 | Shew_1566 | | ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) | low | > 60 |
| Enterobacter asburiae PDN3 | 0.72 | EX28DRAFT_0199 | | coproporphyrinogen oxidase (EC 1.3.3.3) | 0.91 | EX28DRAFT_2050 | | ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) | low | > 76 |
| Escherichia fergusonii Becca | 0.72 | EFB2_01443 | | Oxygen-dependent coproporphyrinogen-III oxidase | 0.92 | EFB2_03179 | | ATP-dependent Clp protease ATP-binding subunit ClpA | 0.35 | 57 |
| Escherichia coli ECRC98 | 0.71 | JDDGAC_26045 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.92 | JDDGAC_09420 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Escherichia coli ECRC100 | 0.71 | OKFHMN_22095 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.92 | OKFHMN_05785 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 80 |
| Escherichia coli ECRC101 | 0.71 | MCAODC_12625 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.92 | MCAODC_25000 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 87 |
| Escherichia coli ECRC102 | 0.71 | NIAGMN_19865 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.92 | NIAGMN_03825 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Escherichia coli ECRC99 | 0.71 | KEDOAH_06125 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.92 | KEDOAH_22125 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Shewanella sp. ANA-3 | 0.71 | Shewana3_0041 | | coproporphyrinogen III oxidase (RefSeq) | 0.71 | Shewana3_1753 | | ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.71 | SO0038 | hemF | coproporphyrinogen III oxidase, aerobic (NCBI ptt file) | 0.71 | SO2626 | clpA | ATP-dependent Clp protease, ATP-binding subunit ClpA (NCBI ptt file) | low | > 76 |
| Klebsiella michiganensis M5al | 0.70 | BWI76_RS20740 | | coproporphyrinogen III oxidase | 0.91 | BWI76_RS09615 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 92 |
| Shewanella amazonensis SB2B | 0.69 | Sama_0050 | | coproporphyrinogen III oxidase (RefSeq) | 0.71 | Sama_2056 | | ATP-dependent Clp protease, ATP-binding subunit ClpA (RefSeq) | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.69 | MIT1002_00026 | | Coproporphyrinogen-III oxidase, aerobic | 0.72 | MIT1002_01834 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.67 | Pf1N1B4_1907 | | Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) | 0.65 | Pf1N1B4_4055 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Pseudomonas stutzeri RCH2 | 0.67 | Psest_0028 | | Coproporphyrinogen III oxidase | 0.65 | Psest_2027 | | ATP-dependent Clp protease ATP-binding subunit clpA | low | > 67 |
| Pseudomonas fluorescens GW456-L13 | 0.67 | PfGW456L13_645 | | Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) | 0.65 | PfGW456L13_2646 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Pseudomonas putida KT2440 | 0.66 | PP_0073 | | Coproporphyrinogen-III oxidase, aerobic | 0.65 | PP_4008 | | ATP-dependent serine protease | — | — |
| Pseudomonas sp. RS175 | 0.66 | PFR28_04656 | | Oxygen-dependent coproporphyrinogen-III oxidase | 0.66 | PFR28_02613 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.66 | AO353_10665 | | coproporphyrinogen III oxidase | 0.65 | AO353_27675 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.66 | Psyr_0024 | | coproporphyrinogen oxidase | 0.65 | Psyr_3183 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.66 | Psyr_0024 | | coproporphyrinogen oxidase | 0.65 | Psyr_3183 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.66 | Pf6N2E2_4129 | | Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) | 0.65 | Pf6N2E2_292 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Pseudomonas sp. S08-1 | 0.66 | OH686_12490 | | Coproporphyrinogen III oxidase, aerobic | 0.65 | OH686_00235 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.66 | AO356_11310 | | coproporphyrinogen III oxidase | 0.65 | AO356_22150 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.66 | CSW01_00275 | | coproporphyrinogen III oxidase | 0.78 | CSW01_05805 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.65 | ABZR86_RS13525 | | oxygen-dependent coproporphyrinogen oxidase | 0.64 | ABZR86_RS02200 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.65 | PFLU_RS00115 | | oxygen-dependent coproporphyrinogen oxidase | 0.65 | PFLU_RS18550 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Pseudomonas fluorescens SBW25 | 0.65 | PFLU_RS00115 | | oxygen-dependent coproporphyrinogen oxidase | 0.65 | PFLU_RS18550 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Rhodanobacter denitrificans MT42 | 0.65 | LRK55_RS09455 | | oxygen-dependent coproporphyrinogen oxidase | 0.62 | LRK55_RS00160 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.65 | OKGIIK_16050 | hemF | oxygen-dependent coproporphyrinogen oxidase | 0.62 | OKGIIK_06890 | clpA | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Pseudomonas simiae WCS417 | 0.64 | PS417_00120 | | coproporphyrinogen III oxidase | 0.66 | PS417_16510 | | Clp protease ClpX | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.64 | LRK54_RS09795 | | oxygen-dependent coproporphyrinogen oxidase | 0.62 | LRK54_RS00420 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Kangiella aquimarina DSM 16071 | 0.64 | B158DRAFT_0404 | | coproporphyrinogen oxidase (EC 1.3.3.3) | 0.66 | B158DRAFT_1505 | | ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) | — | — |
| Dechlorosoma suillum PS | 0.63 | Dsui_1597 | | coproporphyrinogen III oxidase | 0.62 | Dsui_0009 | | ATP-dependent Clp protease ATP-binding subunit clpA | — | — |
| Ralstonia solanacearum PSI07 | 0.62 | RPSI07_RS13675 | | oxygen-dependent coproporphyrinogen oxidase | 0.61 | RPSI07_RS12575 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Herbaspirillum seropedicae SmR1 | 0.62 | HSERO_RS17765 | | coproporphyrinogen III oxidase | 0.63 | HSERO_RS07030 | | ATP-dependent Clp protease ATP-binding protein | — | — |
| Burkholderia phytofirmans PsJN | 0.62 | BPHYT_RS06400 | | oxygen-dependent coproporphyrinogen-III oxidase | 0.61 | BPHYT_RS15710 | | ATP-dependent Clp protease ATP-binding protein | low | > 109 |
| Paraburkholderia sabiae LMG 24235 | 0.62 | QEN71_RS24405 | | oxygen-dependent coproporphyrinogen oxidase | 0.62 | QEN71_RS03005 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Ralstonia solanacearum UW163 | 0.62 | UW163_RS10120 | | coproporphyrinogen III oxidase | 0.61 | UW163_RS08860 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.62 | RALBFv3_RS03550 | | coproporphyrinogen III oxidase | 0.61 | RALBFv3_RS04810 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.62 | H281DRAFT_04520 | | coproporphyrinogen oxidase | 0.61 | H281DRAFT_04082 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.62 | Xcc-8004.5101.1 | | Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) | 0.63 | Xcc-8004.2754.1 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Ralstonia solanacearum GMI1000 | 0.62 | RS_RS11000 | | coproporphyrinogen III oxidase | 0.62 | RS_RS12370 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Ralstonia sp. UNC404CL21Col | 0.62 | ABZR87_RS15415 | | oxygen-dependent coproporphyrinogen oxidase | 0.62 | ABZR87_RS00435 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.61 | RR42_RS04725 | | coproporphyrinogen III oxidase | 0.61 | RR42_RS17105 | | Clp protease ClpX | — | — |
| Lysobacter sp. OAE881 | 0.61 | ABIE51_RS02020 | | oxygen-dependent coproporphyrinogen oxidase | 0.63 | ABIE51_RS11490 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Variovorax sp. OAS795 | 0.59 | ABID97_RS16730 | | oxygen-dependent coproporphyrinogen oxidase | 0.61 | ABID97_RS16910 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Variovorax sp. SCN45 | 0.59 | GFF301 | | Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) | 0.61 | GFF341 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Acidovorax sp. GW101-3H11 | 0.59 | Ac3H11_2420 | | Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) | 0.61 | Ac3H11_2456 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.58 | GFF4526 | | Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) | 0.61 | GFF4521 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Acinetobacter radioresistens SK82 | 0.58 | MPMX26_02746 | | Oxygen-dependent coproporphyrinogen-III oxidase | 0.60 | MPMX26_01284 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Castellaniella sp019104865 MT123 | 0.58 | ABCV34_RS02545 | | oxygen-dependent coproporphyrinogen oxidase | 0.60 | ABCV34_RS05305 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 48 |
| Azospirillum sp. SherDot2 | 0.34 | MPMX19_05010 | | Oxygen-dependent coproporphyrinogen-III oxidase | 0.58 | MPMX19_00503 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Phaeobacter inhibens DSM 17395 | 0.33 | PGA1_c29970 | | coproporphyrinogen 3 oxidase, aerobic | 0.58 | PGA1_c25150 | | ATP-dependent Clp protease ATP-binding subunit | — | — |
| Bosea sp. OAE506 | 0.33 | ABIE41_RS11175 | | oxygen-dependent coproporphyrinogen oxidase | 0.58 | ABIE41_RS18235 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.32 | CCNA_00540 | | coproporphyrinogen III oxidase | 0.59 | CCNA_02553 | | ATP-dependent clp protease ATP-binding subunit ClpA | — | — |
| Caulobacter crescentus NA1000 | 0.32 | CCNA_00540 | | coproporphyrinogen III oxidase | 0.59 | CCNA_02553 | | ATP-dependent clp protease ATP-binding subunit ClpA | — | — |
| Rhodopseudomonas palustris CGA009 | 0.32 | TX73_007780 | | oxygen-dependent coproporphyrinogen oxidase | 0.58 | TX73_016270 | | ATP-dependent Clp protease ATP-binding subunit ClpA | low | > 86 |
| Sinorhizobium meliloti 1021 | 0.31 | SMc00180 | | coproporphyrinogen III oxidase | 0.56 | SMc02109 | | ATP-dependent Clp protease ATP-binding subunit protein | — | — |
| Agrobacterium fabrum C58 | 0.30 | Atu2247 | | coproporphyrinogen III oxidase | 0.56 | Atu1364 | | ATP-dependent Clp protease, ATP-binding subunit | — | — |
| Rhizobium sp. OAE497 | 0.30 | ABIE40_RS13225 | | oxygen-dependent coproporphyrinogen oxidase | 0.58 | ABIE40_RS08865 | | ATP-dependent Clp protease ATP-binding subunit ClpA | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.29 | Ga0059261_3217 | | coproporphyrinogen oxidase (EC 1.3.3.3) | 0.58 | Ga0059261_1001 | | ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) | — | — |
Not shown: 6 genomes with orthologs for HER17_RS17265 only; 10 genomes with orthologs for HER17_RS12400 only