Conservation of cofitness between PS417_04375 and PS417_04380 in Pseudomonas simiae WCS417

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04375 ABC transporter ATP-binding protein 1.0 PS417_04380 ABC transporter permease 0.36 8
Pseudomonas fluorescens SBW25 0.99 PFLU_RS04430 ATP-binding cassette domain-containing protein 0.99 PFLU_RS04435 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.95 2
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS04430 ATP-binding cassette domain-containing protein 0.99 PFLU_RS04435 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.89 3
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_05150 ABC transporter ATP-binding protein 0.90 AO353_05145 ABC transporter permease 0.90 3
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_5008 Uncharacterized ABC transporter, ATP-binding protein YrbF 0.88 PfGW456L13_5007 Uncharacterized ABC transporter, permease component YrbE
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_07005 ABC transporter ATP-binding protein 0.93 AO356_07000 ABC transporter permease 0.50 4
Pseudomonas putida KT2440 0.94 PP_0958 phospholipid ABC transporter ATP-binding subunit 0.87 PP_0959 phospholipid ABC transporter 0.69 5
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_3260 Uncharacterized ABC transporter, ATP-binding protein YrbF 0.93 Pf6N2E2_3259 Uncharacterized ABC transporter, permease component YrbE
Pseudomonas sp. RS175 0.94 PFR28_00179 Intermembrane phospholipid transport system ATP-binding protein MlaF 0.93 PFR28_00180 Intermembrane phospholipid transport system permease protein MlaE 0.91 4
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_4141 ABC transporter 0.90 Psyr_4140 Protein of unknown function DUF140 0.39 10
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_4141 ABC transporter 0.90 Psyr_4140 Protein of unknown function DUF140 0.42 19
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_1074 Uncharacterized ABC transporter, ATP-binding protein YrbF 0.88 Pf1N1B4_1073 Uncharacterized ABC transporter, permease component YrbE
Pseudomonas sp. S08-1 0.91 OH686_08510 Phospholipid ABC transporter ATP-binding protein MlaF 0.85 OH686_08505 Phospholipid ABC transporter permease protein MlaE 0.86 3
Pseudomonas stutzeri RCH2 0.86 Psest_3307 ABC-type transport system involved in resistance to organic solvents, ATPase component 0.88 Psest_3306 conserved hypothetical integral membrane protein 0.94 4
Rahnella sp. WP5 0.68 EX31_RS12435 phospholipid ABC transporter ATP-binding protein MlaF 0.63 EX31_RS12440 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.53 8
Marinobacter adhaerens HP15 0.64 HP15_2436 toluene tolerance ABC efflux transporter, ATP-binding protein 0.71 HP15_2435 ABC-type transport system involved in resistance to organic solvents, permease component 0.91 2
Shewanella amazonensis SB2B 0.63 Sama_3081 ABC transporter, ATP-binding protein, putative (RefSeq) 0.61 Sama_3080 hypothetical protein (RefSeq) 0.96 2
Pantoea sp. MT58 0.63 IAI47_17145 phospholipid ABC transporter ATP-binding protein MlaF 0.65 IAI47_17140 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.70 2
Pectobacterium carotovorum WPP14 0.62 HER17_RS20025 phospholipid ABC transporter ATP-binding protein MlaF 0.63 HER17_RS20020 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.85 1
Acinetobacter radioresistens SK82 0.62 MPMX26_02741 Intermembrane phospholipid transport system ATP-binding protein MlaF 0.59 MPMX26_02740 Intermembrane phospholipid transport system permease protein MlaE 1.00 1
Shewanella sp. ANA-3 0.62 Shewana3_0678 ABC transporter related (RefSeq) 0.59 Shewana3_0679 hypothetical protein (RefSeq) 0.74 4
Shewanella oneidensis MR-1 0.62 SO3954 ABC transporter, ATP-binding protein, putative (NCBI ptt file) 0.59 SO3953 conserved hypothetical protein TIGR00056 (NCBI ptt file) 0.93 2
Dickeya dadantii 3937 0.61 DDA3937_RS01565 phospholipid ABC transporter ATP-binding protein MlaF 0.63 DDA3937_RS01570 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.69 6
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_12775 phospholipid ABC transporter ATP-binding protein MlaF 0.64 CSW01_12770 ABC transporter permease 0.78 2
Serratia liquefaciens MT49 0.60 IAI46_22430 phospholipid ABC transporter ATP-binding protein MlaF 0.64 IAI46_22425 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 86
Dickeya dianthicola 67-19 0.60 HGI48_RS01480 phospholipid ABC transporter ATP-binding protein MlaF 0.63 HGI48_RS01485 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 71
Shewanella loihica PV-4 0.60 Shew_3304 ABC transporter-related protein (RefSeq) 0.60 Shew_3303 hypothetical protein (RefSeq) 0.84 1
Dickeya dianthicola ME23 0.60 DZA65_RS01545 phospholipid ABC transporter ATP-binding protein MlaF 0.63 DZA65_RS01550 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.83 3
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS18970 toluene ABC transporter ATP-binding protein 0.53 RR42_RS18965 ABC transporter permease 0.99 1
Erwinia tracheiphila SCR3 0.58 LU632_RS21245 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.62 LU632_RS21240 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.94 8
Enterobacter sp. TBS_079 0.58 MPMX20_04101 Intermembrane phospholipid transport system ATP-binding protein MlaF 0.60 MPMX20_04100 Intermembrane phospholipid transport system permease protein MlaE 0.41 3
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF1325 Methionine ABC transporter ATP-binding protein 0.45 GFF1324 Uncharacterized ABC transporter, permease component YrbE 0.82 1
Klebsiella michiganensis M5al 0.58 BWI76_RS25230 phospholipid ABC transporter ATP-binding protein MlaF 0.60 BWI76_RS25225 ABC transporter permease 0.91 1
Enterobacter asburiae PDN3 0.58 EX28DRAFT_3249 ABC-type transport system involved in resistance to organic solvents, ATPase component 0.60 EX28DRAFT_3248 ABC transport permease subunit 0.53 36
Alteromonas macleodii MIT1002 0.58 MIT1002_00834 putative ABC transporter ATP-binding protein 0.62 MIT1002_00835 putative phospholipid ABC transporter permease protein MlaE 0.73 1
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS11885 ATP-binding cassette domain-containing protein 0.46 ABZR86_RS11880 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.88 3
Dechlorosoma suillum PS 0.57 Dsui_1398 ABC-type transport system involved in resistance to organic solvents, ATPase component 0.50 Dsui_1399 conserved hypothetical integral membrane protein 0.96 2
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS02555 ABC transporter ATP-binding protein 0.52 ABZR87_RS02550 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.95 4
Escherichia coli ECRC98 0.56 JDDGAC_21600 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.60 JDDGAC_21605 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Escherichia coli ECRC62 0.56 BNILDI_01760 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.60 BNILDI_01755 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF2939 Uncharacterized ABC transporter, ATP-binding protein YrbF 0.61 GFF2938 Uncharacterized ABC transporter, permease component YrbE 0.51 2
Escherichia coli BL21 0.56 ECD_03060 ABC transporter maintaining OM lipid asymmetry, ATP-binding protein 0.60 ECD_03059 ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein 0.78 8
Escherichia coli ECOR27 0.56 NOLOHH_09775 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.60 NOLOHH_09780 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.91 3
Escherichia coli ECOR38 0.56 HEPCGN_16850 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.60 HEPCGN_16855 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.90 6
Escherichia fergusonii Becca 0.56 EFB2_00628 Intermembrane phospholipid transport system ATP-binding protein MlaF 0.60 EFB2_00629 Intermembrane phospholipid transport system permease protein MlaE 0.71 59
Escherichia coli ECRC101 0.56 MCAODC_08495 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.60 MCAODC_08500 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Escherichia coli BW25113 0.56 b3195 yrbF predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) 0.60 b3194 yrbE predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) 0.94 4
Escherichia coli Nissle 1917 0.56 ECOLIN_RS18390 phospholipid ABC transporter ATP-binding protein MlaF 0.60 ECOLIN_RS18385 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.97 3
Escherichia coli ECRC102 0.56 NIAGMN_15735 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.60 NIAGMN_15740 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Escherichia coli ECRC99 0.56 KEDOAH_10175 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.60 KEDOAH_10170 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Escherichia coli ECRC101 0.56 OKFHMN_17975 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.60 OKFHMN_17980 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_00505 putative phospholipid import ATP-binding protein MlaF 0.60 OHPLBJKB_00506 putative phospholipid ABC transporter permease protein MlaE 0.80 2
Ralstonia solanacearum PSI07 0.56 RPSI07_RS10335 ABC transporter ATP-binding protein 0.51 RPSI07_RS10340 ABC transporter permease 0.73 2
Variovorax sp. OAS795 0.56 ABID97_RS23215 ABC transporter ATP-binding protein 0.49 ABID97_RS23210 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.88 3
Acidovorax sp. GW101-3H11 0.56 Ac3H11_4712 Methionine ABC transporter ATP-binding protein 0.48 Ac3H11_4713 Uncharacterized ABC transporter, permease component YrbE 0.94 2
Ralstonia solanacearum GMI1000 0.56 RS_RS14845 ABC transporter ATP-binding protein 0.51 RS_RS14840 ABC transporter permease 0.97 4
Rhodanobacter sp. FW510-T8 0.56 OKGIIK_12135 mlaF ABC transporter ATP-binding protein 0.45 OKGIIK_12130 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.99 5
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_05641 phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein 0.53 H281DRAFT_05642 phospholipid/cholesterol/gamma-HCH transport system permease protein 0.87 4
Paraburkholderia graminis OAS925 0.55 ABIE53_003712 phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein 0.53 ABIE53_003711 phospholipid/cholesterol/gamma-HCH transport system permease protein 0.96 3
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS20400 toluene ABC transporter ATP-binding protein 0.45 HSERO_RS20395 ABC transporter permease
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS27920 ABC transporter ATP-binding protein 0.52 QEN71_RS27915 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.88 2
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS17765 toluene ABC transporter ATP-binding protein 0.50 BPHYT_RS17760 ABC transporter permease 0.88 2
Variovorax sp. SCN45 0.54 GFF5334 Phospholipid ABC transporter ATP-binding protein MlaF 0.50 GFF5335 Phospholipid ABC transporter permease protein MlaE 0.59 52
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS11760 ATP-binding cassette domain-containing protein 0.46 LRK54_RS11765 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.95 3
Rhodanobacter denitrificans MT42 0.53 LRK55_RS11485 ATP-binding cassette domain-containing protein 0.46 LRK55_RS11490 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.96 4
Ralstonia solanacearum UW163 0.53 UW163_RS06715 ABC transporter ATP-binding protein 0.51 UW163_RS06720 ABC transporter permease
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS06900 ABC transporter ATP-binding protein 0.51 RALBFv3_RS06895 ABC transporter permease
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.5363.1 Uncharacterized ABC transporter, ATP-binding protein YrbF 0.39 Xcc-8004.5365.1 Uncharacterized ABC transporter, permease component YrbE 0.46 70
Lysobacter sp. OAE881 0.47 ABIE51_RS01015 ABC transporter ATP-binding protein 0.34 ABIE51_RS01010 MlaE family lipid ABC transporter permease subunit 0.94 2
Castellaniella sp019104865 MT123 0.46 ABCV34_RS11180 ABC transporter ATP-binding protein 0.49 ABCV34_RS11185 lipid asymmetry maintenance ABC transporter permease subunit MlaE
Desulfovibrio vulgaris Miyazaki F 0.33 DvMF_0853 ABC transporter related (RefSeq) 0.34 DvMF_0852 protein of unknown function DUF140 (RefSeq) 0.65 3
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_0350 ATPase 0.25 Synpcc7942_0378 ycf63 Protein of unknown function DUF140 0.94 2
Dinoroseobacter shibae DFL-12 0.30 Dshi_2380 ABC transporter related (RefSeq) 0.22 Dshi_2379 protein of unknown function DUF140 (RefSeq) 0.92 3
Bacteroides ovatus ATCC 8483 0.28 BACOVA_00332 ABC transporter, ATP-binding protein 0.19 BACOVA_00331 hypothetical protein 0.78 2

Not shown: 0 genomes with orthologs for PS417_04375 only; 14 genomes with orthologs for PS417_04380 only