| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_26760 | | oxidase | 1.0 | PS417_04060 | | dipeptide ABC transporter, permease component (from data) | 0.38 | 19 |
| Pseudomonas fluorescens SBW25 | 0.98 | PFLU_RS28405 | | radical SAM family heme chaperone HemW | 1.00 | PFLU_RS04100 | | ABC transporter permease subunit | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.98 | PFLU_RS28405 | | radical SAM family heme chaperone HemW | 1.00 | PFLU_RS04100 | | ABC transporter permease subunit | 0.25 | 63 |
| Pseudomonas fluorescens FW300-N2E3 | 0.93 | AO353_08200 | | coproporphyrinogen III oxidase | 0.96 | AO353_05395 | | peptide ABC transporter permease | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.92 | Pf1N1B4_2334 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.97 | Pf1N1B4_1124 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.91 | PfGW456L13_1003 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.98 | PfGW456L13_5055 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.88 | AO356_13390 | | coproporphyrinogen III oxidase | 0.97 | AO356_07260 | | peptide ABC transporter permease | low | > 104 |
| Pseudomonas sp. RS175 | 0.87 | PFR28_04249 | | Heme chaperone HemW | 0.97 | PFR28_00127 | | Dipeptide transport system permease protein DppB | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.86 | Pf6N2E2_4593 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.98 | Pf6N2E2_3311 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | low | > 103 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.79 | Psyr_0471 | | coproporphyrinogen III oxidase, anaerobic | 0.95 | Psyr_4239 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.79 | Psyr_0471 | | coproporphyrinogen III oxidase, anaerobic | 0.95 | Psyr_4239 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Pseudomonas putida KT2440 | 0.74 | PP_5101 | | coproporphyrinogen/heterocyclic compound oxidase (aerobic) | 0.93 | PP_0881 | | dipeptide ABC transporter - putative membrane subunit | low | > 96 |
| Pseudomonas sp. S08-1 | 0.74 | OH686_11020 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW | 0.91 | OH686_08705 | | Dipeptide ABC transporter, permease protein DppB | low | > 80 |
| Kangiella aquimarina DSM 16071 | 0.55 | B158DRAFT_0201 | | coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22) | 0.47 | B158DRAFT_1046 | | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components | low | > 40 |
| Shewanella sp. ANA-3 | 0.54 | Shewana3_1188 | | putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) | 0.36 | Shewana3_2651 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | — | — |
| Serratia liquefaciens MT49 | 0.54 | IAI46_21435 | | radical SAM family heme chaperone HemW | 0.69 | IAI46_00480 | | dipeptide ABC transporter permease DppB | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.53 | HER17_RS03785 | | radical SAM family heme chaperone HemW | 0.67 | HER17_RS00225 | | dipeptide ABC transporter permease DppB | low | > 75 |
| Shewanella oneidensis MR-1 | 0.53 | SO3359 | | oxygen-independent coproporphyrinogen III oxidase, putative (NCBI ptt file) | 0.36 | SO1804 | sapB | peptide ABC transporter, permease protein (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.53 | Sama_2483 | | oxygen-independent coproporphyrinogen III oxidase, putative (RefSeq) | 0.39 | Sama_1234 | | peptide ABC transporter, permease protein (RefSeq) | low | > 62 |
| Vibrio cholerae E7946 ATCC 55056 | 0.52 | CSW01_02425 | | YggW family oxidoreductase | 0.31 | CSW01_08450 | | antimicrobial peptide ABC transporter permease SapB | low | > 62 |
| Escherichia coli ECOR38 | 0.52 | HEPCGN_18540 | hemW | radical SAM family heme chaperone HemW | 0.66 | HEPCGN_14970 | dppB | dipeptide ABC transporter permease DppB | low | > 87 |
| Klebsiella michiganensis M5al | 0.52 | BWI76_RS24120 | | YggW family oxidoreductase | 0.66 | BWI76_RS26880 | | dipeptide ABC transporter permease DppB | low | > 92 |
| Escherichia fergusonii Becca | 0.52 | EFB2_00947 | | Heme chaperone HemW | 0.66 | EFB2_00264 | | Dipeptide transport system permease protein DppB | low | > 86 |
| Rahnella sp. WP5 | 0.52 | EX31_RS02710 | | radical SAM family heme chaperone HemW | 0.68 | EX31_RS05510 | | dipeptide ABC transporter permease DppB | low | > 89 |
| Escherichia coli BL21 | 0.52 | ECD_02785 | | HemN family putative oxidoreductase | 0.66 | ECD_03394 | | dipeptide/heme ABC transporter permease | low | > 61 |
| Pantoea sp. MT58 | 0.52 | IAI47_03580 | | radical SAM family heme chaperone HemW | 0.66 | IAI47_18645 | | dipeptide ABC transporter permease DppB | low | > 76 |
| Escherichia coli ECRC101 | 0.52 | MCAODC_09755 | hemW | radical SAM family heme chaperone HemW | 0.66 | MCAODC_06620 | dppB | dipeptide ABC transporter permease DppB | low | > 87 |
| Enterobacter sp. TBS_079 | 0.52 | MPMX20_03813 | | Heme chaperone HemW | 0.67 | MPMX20_00191 | | Dipeptide transport system permease protein DppB | low | > 85 |
| Escherichia coli ECRC100 | 0.52 | OKFHMN_19235 | hemW | radical SAM family heme chaperone HemW | 0.66 | OKFHMN_16105 | dppB | dipeptide ABC transporter permease DppB | low | > 80 |
| Escherichia coli ECRC99 | 0.52 | KEDOAH_08905 | hemW | radical SAM family heme chaperone HemW | 0.66 | KEDOAH_12045 | dppB | dipeptide ABC transporter permease DppB | — | — |
| Escherichia coli ECRC98 | 0.52 | JDDGAC_22865 | hemW | radical SAM family heme chaperone HemW | 0.66 | JDDGAC_19735 | dppB | dipeptide ABC transporter permease DppB | low | > 86 |
| Shewanella loihica PV-4 | 0.52 | Shew_1131 | | putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) | 0.37 | Shew_2499 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | — | — |
| Escherichia coli ECRC102 | 0.52 | NIAGMN_17000 | hemW | radical SAM family heme chaperone HemW | 0.66 | NIAGMN_13865 | dppB | dipeptide ABC transporter permease DppB | — | — |
| Escherichia coli BW25113 | 0.52 | b2955 | yggW | coproporphyrinogen III oxidase (NCBI) | 0.66 | b3543 | dppB | dipeptide ABC transporter, membrane subunit (DppB) (from data) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.52 | OHPLBJKB_00761 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR | 0.66 | OHPLBJKB_00163 | | Dipeptide transport system permease protein DppB | low | > 73 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.52 | GFF3058 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.66 | GFF476 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | low | > 78 |
| Erwinia tracheiphila SCR3 | 0.51 | LU632_RS05445 | hemW | radical SAM family heme chaperone HemW | 0.67 | LU632_RS00270 | dppB | dipeptide ABC transporter permease DppB | low | > 74 |
| Escherichia coli Nissle 1917 | 0.51 | ECOLIN_RS16435 | | radical SAM family heme chaperone HemW | 0.66 | ECOLIN_RS20270 | | dipeptide ABC transporter permease DppB | low | > 55 |
| Dickeya dianthicola 67-19 | 0.51 | HGI48_RS17370 | | radical SAM family heme chaperone HemW | 0.66 | HGI48_RS20920 | | dipeptide ABC transporter permease DppB | low | > 71 |
| Escherichia coli ECRC62 | 0.51 | BNILDI_09685 | hemW | radical SAM family heme chaperone HemW | 0.66 | BNILDI_03510 | dppB | dipeptide ABC transporter permease DppB | low | > 75 |
| Enterobacter asburiae PDN3 | 0.51 | EX28DRAFT_2993 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.66 | EX28DRAFT_3803 | | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components | low | > 76 |
| Escherichia coli ECOR27 | 0.51 | NOLOHH_11105 | hemW | radical SAM family heme chaperone HemW | 0.66 | NOLOHH_08050 | dppB | dipeptide ABC transporter permease DppB | low | > 75 |
| Dickeya dianthicola ME23 | 0.51 | DZA65_RS18460 | | radical SAM family heme chaperone HemW | 0.66 | DZA65_RS21915 | | dipeptide ABC transporter permease DppB | low | > 75 |
| Herbaspirillum seropedicae SmR1 | 0.50 | HSERO_RS10665 | | coproporphyrinogen III oxidase | 0.34 | HSERO_RS09200 | | glutathione ABC transporter permease | low | > 78 |
| Dickeya dadantii 3937 | 0.50 | DDA3937_RS17325 | | radical SAM family heme chaperone HemW | 0.66 | DDA3937_RS00465 | | dipeptide ABC transporter permease DppB | low | > 74 |
| Cupriavidus basilensis FW507-4G11 | 0.50 | RR42_RS04880 | | coproporphyrinogen III oxidase | 0.34 | RR42_RS18205 | | ABC transporter permease | low | > 128 |
| Dechlorosoma suillum PS | 0.49 | Dsui_0491 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.27 | Dsui_0412 | | ABC-type dipeptide/oligopeptide/nickel transport system, permease component | low | > 51 |
| Alteromonas macleodii MIT1002 | 0.49 | MIT1002_00939 | | Oxygen-independent coproporphyrinogen-III oxidase 1 | 0.36 | MIT1002_01140 | | Dipeptide transport system permease protein DppB | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.48 | QEN71_RS03635 | | radical SAM family heme chaperone HemW | 0.73 | QEN71_RS28700 | | ABC transporter permease subunit | low | > 153 |
| Ralstonia solanacearum PSI07 | 0.48 | RPSI07_RS13830 | | oxygen-independent coproporphyrinogen III oxidase-like protein | 0.35 | RPSI07_RS17230 | | glutathione ABC transporter permease GsiC | low | > 81 |
| Marinobacter adhaerens HP15 | 0.47 | HP15_280 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.28 | HP15_201 | | peptide transport system permease ABC transporter protein | low | > 73 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.47 | H281DRAFT_04010 | | oxygen-independent coproporphyrinogen-3 oxidase | 0.74 | H281DRAFT_05803 | | dipeptide transport system permease protein | low | > 103 |
| Variovorax sp. OAS795 | 0.47 | ABID97_RS23630 | | radical SAM family heme chaperone HemW | 0.67 | ABID97_RS04450 | | ABC transporter permease subunit | low | > 91 |
| Burkholderia phytofirmans PsJN | 0.47 | BPHYT_RS15335 | | coproporphyrinogen III oxidase | 0.74 | BPHYT_RS18685 | | peptide ABC transporter permease | low | > 109 |
| Ralstonia solanacearum GMI1000 | 0.47 | RS_RS10840 | | oxygen-independent coproporphyrinogen III oxidase-like protein | 0.34 | RS_RS06925 | | glutathione ABC transporter permease GsiC | low | > 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.46 | GFF3256 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.34 | GFF1370 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | low | > 90 |
| Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS15265 | | radical SAM family heme chaperone HemW | 0.34 | ABZR87_RS11715 | | glutathione ABC transporter permease GsiC | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.46 | RALBFv3_RS03355 | | oxygen-independent coproporphyrinogen III oxidase-like protein | 0.35 | RALBFv3_RS00250 | | glutathione ABC transporter permease GsiC | low | > 76 |
| Ralstonia solanacearum UW163 | 0.46 | UW163_RS10365 | | oxygen-independent coproporphyrinogen III oxidase-like protein | 0.35 | UW163_RS13580 | | glutathione ABC transporter permease GsiC | — | — |
| Variovorax sp. SCN45 | 0.46 | GFF2383 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW | 0.66 | GFF7284 | | Dipeptide ABC transporter, permease protein DppB (TC 3.A.1.5.2) | low | > 127 |
| Castellaniella sp019104865 MT123 | 0.45 | ABCV34_RS03525 | | radical SAM family heme chaperone HemW | 0.39 | ABCV34_RS11105 | | ABC transporter permease | low | > 48 |
| Azospirillum brasilense Sp245 | 0.32 | AZOBR_RS02195 | | coproporphyrinogen III oxidase | 0.72 | AZOBR_RS21765 | | peptide ABC transporter permease | low | > 97 |
| Phaeobacter inhibens DSM 17395 | 0.30 | PGA1_c35050 | | oxygen-independent coproporphyrinogen III oxidase HemN | 0.38 | PGA1_c28430 | | putative D,D-dipeptide transport system permease protein | low | > 62 |
| Azospirillum sp. SherDot2 | 0.30 | MPMX19_02574 | | Heme chaperone HemW | 0.70 | MPMX19_04418 | | Dipeptide transport system permease protein DppB | low | > 112 |
| Rhodospirillum rubrum S1H | 0.29 | Rru_A3639 | | Putative oxygen-independent coproporphyrinogen III oxidase (NCBI) | 0.70 | Rru_A2357 | | Binding-protein-dependent transport systems inner membrane component (NCBI) | low | > 58 |
| Rhizobium sp. OAE497 | 0.29 | ABIE40_RS01625 | | radical SAM family heme chaperone HemW | 0.65 | ABIE40_RS03350 | | ABC transporter permease subunit | — | — |
| Dinoroseobacter shibae DFL-12 | 0.29 | Dshi_3460 | | putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) | 0.33 | Dshi_0881 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | low | > 64 |
| Rhodopseudomonas palustris CGA009 | 0.28 | TX73_001700 | | radical SAM family heme chaperone HemW | 0.40 | TX73_007570 | | ABC transporter permease | — | — |
| Agrobacterium fabrum C58 | 0.28 | Atu0325 | | oxygen-independent coproporphyrinogen III oxidase | 0.63 | Atu4114 | | dipeptide ABC transporter permease | — | — |
| Sinorhizobium meliloti 1021 | 0.28 | SMc01147 | | coproporphyrinogen III oxidase | 0.62 | SMc00787 | | peptide ABC transporter permease | low | > 103 |
| Bosea sp. OAE506 | 0.27 | ABIE41_RS03305 | | radical SAM family heme chaperone HemW | 0.38 | ABIE41_RS12195 | | ABC transporter permease | low | > 77 |
| Magnetospirillum magneticum AMB-1 | 0.26 | AMB_RS22770 | | radical SAM protein | 0.27 | AMB_RS09975 | | ABC transporter permease | low | > 64 |
| Synechococcus elongatus PCC 7942 | 0.26 | Synpcc7942_2382 | hemN | coproporphyrinogen III oxidase | 0.27 | Synpcc7942_0822 | appB | permease protein of oligopeptide ABC | low | > 38 |
| Fusobacterium nucleatum SB010 | 0.25 | HUW76_07285 | | radical SAM family heme chaperone HemW | 0.40 | HUW76_03520 | | ABC transporter permease | low | > 35 |
| Desulfovibrio vulgaris Miyazaki F | 0.24 | DvMF_2374 | | oxygen-independent coproporphyrinogen III oxidase (RefSeq) | 0.32 | DvMF_0920 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | low | > 51 |
| Mycobacterium tuberculosis H37Rv | 0.22 | Rv2388c | | Probable oxygen-independent coproporphyrinogen III oxidase HemN (coproporphyrinogenase) (coprogen oxidase) | 0.30 | Rv3665c | | Probable dipeptide-transport integral membrane protein ABC transporter DppB | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.22 | CA265_RS18155 | | coproporphyrinogen III oxidase | 0.27 | CA265_RS25300 | | ABC transporter permease | low | > 88 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.21 | ABZR88_RS03545 | | radical SAM family heme chaperone HemW | 0.27 | ABZR88_RS19860 | | ABC transporter permease | low | > 71 |
| Bifidobacterium breve UCC2003 | 0.21 | BBR_RS15235 | | coproporphyrinogen III oxidase | 0.28 | BBR_RS16645 | | ABC transporter permease | — | — |
Not shown: 21 genomes with orthologs for PS417_26760 only; 1 genomes with orthologs for PS417_04060 only