| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_23250 | | S-adenosylmethionine tRNA ribosyltransferase | 1.0 | PS417_02975 | | 3-dehydroquinate dehydratase | 0.48 | 1 |
| Pseudomonas fluorescens SBW25-INTG | 0.99 | PFLU_RS24905 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.99 | PFLU_RS03050 | | type II 3-dehydroquinate dehydratase | — | — |
| Pseudomonas fluorescens SBW25 | 0.99 | PFLU_RS24905 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.99 | PFLU_RS03050 | | type II 3-dehydroquinate dehydratase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.94 | Pf1N1B4_3005 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) | 0.92 | Pf1N1B4_1307 | | 3-dehydroquinate dehydratase II (EC 4.2.1.10) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.94 | AO353_15785 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.92 | AO353_13685 | | 3-dehydroquinate dehydratase | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.93 | PfGW456L13_4883 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) | 0.93 | PfGW456L13_50 | | 3-dehydroquinate dehydratase II (EC 4.2.1.10) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.91 | AO356_06695 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.94 | AO356_08185 | | 3-dehydroquinate dehydratase | — | — |
| Pseudomonas sp. RS175 | 0.91 | PFR28_00276 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.92 | PFR28_05222 | | 3-dehydroquinate dehydratase 1 | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.91 | Pf6N2E2_3199 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) | 0.92 | Pf6N2E2_3510 | | 3-dehydroquinate dehydratase II (EC 4.2.1.10) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.89 | Psyr_1227 | | Queuosine biosynthesis protein | 0.91 | Psyr_4399 | | 3-dehydroquinate dehydratase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.89 | Psyr_1227 | | Queuosine biosynthesis protein | 0.91 | Psyr_4399 | | 3-dehydroquinate dehydratase | — | — |
| Pseudomonas putida KT2440 | 0.89 | PP_0832 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.89 | PP_0560 | | 3-dehydroquinate dehydratase 1, type II | — | — |
| Pseudomonas sp. S08-1 | 0.85 | OH686_17425 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.92 | OH686_07585 | | 3-dehydroquinate dehydratase, type II | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.85 | Psest_1241 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.87 | Psest_1021 | | 3-dehydroquinate dehydratase, type II | — | — |
| Shewanella sp. ANA-3 | 0.73 | Shewana3_1434 | queA | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (RefSeq) | 0.58 | Shewana3_0511 | | 3-dehydroquinate dehydratase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.73 | SO3114 | queA | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI ptt file) | 0.58 | SO0512 | aroQ | 3-dehydroquinate dehydratase, type II (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.73 | Shew_2338 | | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase (RefSeq) | 0.61 | Shew_3363 | | 3-dehydroquinate dehydratase, type II (RefSeq) | — | — |
| Rahnella sp. WP5 | 0.72 | EX31_RS22090 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.58 | EX31_RS12215 | | type II 3-dehydroquinate dehydratase | low | > 89 |
| Shewanella amazonensis SB2B | 0.72 | Sama_2194 | queA | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (RefSeq) | 0.60 | Sama_3194 | | 3-dehydroquinate dehydratase (RefSeq) | low | > 62 |
| Serratia liquefaciens MT49 | 0.72 | IAI46_04835 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.58 | IAI46_22745 | | type II 3-dehydroquinate dehydratase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.72 | CSW01_03840 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.62 | CSW01_01515 | | type II 3-dehydroquinate dehydratase | low | > 62 |
| Erwinia tracheiphila SCR3 | 0.71 | LU632_RS18485 | queA | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.56 | LU632_RS21475 | aroQ | type II 3-dehydroquinate dehydratase | — | — |
| Pantoea sp. MT58 | 0.71 | IAI47_14810 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.59 | IAI47_02415 | | type II 3-dehydroquinate dehydratase | — | — |
| Enterobacter asburiae PDN3 | 0.71 | EX28DRAFT_2566 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.63 | EX28DRAFT_3306 | | 3-dehydroquinate dehydratase (EC 4.2.1.10) | — | — |
| Dickeya dianthicola 67-19 | 0.71 | HGI48_RS05525 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.54 | HGI48_RS01325 | | type II 3-dehydroquinate dehydratase | — | — |
| Dickeya dadantii 3937 | 0.71 | DDA3937_RS05465 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.55 | DDA3937_RS01405 | | type II 3-dehydroquinate dehydratase | — | — |
| Dickeya dianthicola ME23 | 0.71 | DZA65_RS05850 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.54 | DZA65_RS01385 | | type II 3-dehydroquinate dehydratase | — | — |
| Pectobacterium carotovorum WPP14 | 0.70 | HER17_RS15995 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.57 | HER17_RS20195 | | type II 3-dehydroquinate dehydratase | low | > 75 |
| Enterobacter sp. TBS_079 | 0.70 | MPMX20_00996 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.63 | MPMX20_04162 | | 3-dehydroquinate dehydratase | low | > 85 |
| Marinobacter adhaerens HP15 | 0.65 | HP15_1478 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.65 | HP15_3220 | | dehydroquinase, class II | — | — |
| Alteromonas macleodii MIT1002 | 0.64 | MIT1002_02814 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.62 | MIT1002_03941 | | 3-dehydroquinate dehydratase | — | — |
| Kangiella aquimarina DSM 16071 | 0.62 | B158DRAFT_2515 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.59 | B158DRAFT_0157 | | 3-dehydroquinate dehydratase (EC 4.2.1.10) | — | — |
| Herbaspirillum seropedicae SmR1 | 0.55 | HSERO_RS06170 | | S-adenosylmethionine tRNA ribosyltransferase | 0.51 | HSERO_RS01935 | | 3-dehydroquinate dehydratase | low | > 78 |
| Ralstonia sp. UNC404CL21Col | 0.55 | ABZR87_RS01275 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.63 | ABZR87_RS01645 | | type II 3-dehydroquinate dehydratase | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.55 | RS_RS13570 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.62 | RS_RS13930 | | 3-dehydroquinate dehydratase 1 | — | — |
| Ralstonia solanacearum PSI07 | 0.54 | RPSI07_RS11620 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.63 | RPSI07_RS11260 | | type II 3-dehydroquinate dehydratase | low | > 81 |
| Castellaniella sp019104865 MT123 | 0.54 | ABCV34_RS15370 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.46 | ABCV34_RS11545 | | type II 3-dehydroquinate dehydratase | — | — |
| Ralstonia solanacearum UW163 | 0.54 | UW163_RS07945 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.64 | UW163_RS07640 | | type II 3-dehydroquinate dehydratase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.54 | RALBFv3_RS05680 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.64 | RALBFv3_RS05985 | | type II 3-dehydroquinate dehydratase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.54 | RR42_RS17395 | | S-adenosylmethionine tRNA ribosyltransferase | 0.67 | RR42_RS17690 | | 3-dehydroquinate dehydratase | low | > 128 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.53 | Xcc-8004.2167.1 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) | 0.67 | Xcc-8004.681.1 | | 3-dehydroquinate dehydratase II (EC 4.2.1.10) | — | — |
| Rhodanobacter denitrificans MT42 | 0.53 | LRK55_RS02885 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.62 | LRK55_RS06540 | | type II 3-dehydroquinate dehydratase | low | > 63 |
| Lysobacter sp. OAE881 | 0.52 | ABIE51_RS15025 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.66 | ABIE51_RS17715 | | type II 3-dehydroquinate dehydratase | low | > 62 |
| Acinetobacter radioresistens SK82 | 0.52 | MPMX26_00441 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.63 | MPMX26_01371 | | 3-dehydroquinate dehydratase | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.52 | LRK54_RS03135 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.62 | LRK54_RS06795 | | type II 3-dehydroquinate dehydratase | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.51 | OKGIIK_10005 | queA | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.63 | OKGIIK_16835 | aroQ | type II 3-dehydroquinate dehydratase | low | > 52 |
| Dyella japonica UNC79MFTsu3.2 | 0.51 | ABZR86_RS09545 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.64 | ABZR86_RS17085 | | type II 3-dehydroquinate dehydratase | low | > 74 |
| Variovorax sp. SCN45 | 0.50 | GFF5535 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) | 0.63 | GFF7499 | | 3-dehydroquinate dehydratase II (EC 4.2.1.10) | — | — |
| Burkholderia phytofirmans PsJN | 0.49 | BPHYT_RS03405 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.65 | BPHYT_RS17005 | | 3-dehydroquinate dehydratase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.49 | QEN71_RS26635 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.61 | QEN71_RS27160 | | type II 3-dehydroquinate dehydratase | low | > 153 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.49 | GFF2801 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) | 0.43 | GFF5233 | | 3-dehydroquinate dehydratase II (EC 4.2.1.10) | — | — |
| Paraburkholderia graminis OAS925 | 0.49 | ABIE53_000832 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.65 | ABIE53_003566 | | 3-dehydroquinate dehydratase-2 | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.49 | H281DRAFT_04671 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.65 | H281DRAFT_06285 | | 3-dehydroquinate dehydratase | low | > 103 |
| Dechlorosoma suillum PS | 0.48 | Dsui_3322 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.64 | Dsui_0387 | | 3-dehydroquinate dehydratase, type II | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.43 | DVU3351 | queA | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (TIGR) | 0.38 | DVU1665 | aroQ | 3-dehydroquinate dehydratase, type II (TIGR) | — | — |
| Synechococcus elongatus PCC 7942 | 0.40 | Synpcc7942_2348 | queA | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.52 | Synpcc7942_0915 | aroQ | 3-dehydroquinate dehydratase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.38 | Echvi_0042 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.42 | Echvi_1810 | | 3-dehydroquinate dehydratase, type II | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.38 | ABZR88_RS03940 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.45 | ABZR88_RS10225 | | type II 3-dehydroquinate dehydratase | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.37 | DvMF_2053 | | S-adenosylmethionine/tRNA-ribosyltransferase- isomerase (RefSeq) | 0.38 | DvMF_0373 | | 3-dehydroquinate dehydratase (RefSeq) | — | — |
| Phocaeicola dorei CL03T12C01 | 0.36 | ABI39_RS05610 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.45 | ABI39_RS07005 | | type II 3-dehydroquinate dehydratase | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.36 | HMPREF1058_RS11320 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.45 | HMPREF1058_RS09675 | | type II 3-dehydroquinate dehydratase | — | — |
| Parabacteroides merdae CL09T00C40 | 0.35 | HMPREF1078_RS17105 | | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | 0.43 | HMPREF1078_RS04700 | | type II 3-dehydroquinate dehydratase | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.35 | BT3214 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (NCBI ptt file) | 0.45 | BT2842 | | 3-dehydroquinate dehydratase (NCBI ptt file) | — | — |
| Bacteroides ovatus ATCC 8483 | 0.35 | BACOVA_02915 | | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | 0.46 | BACOVA_02122 | | 3-dehydroquinate dehydratase, type II | — | — |
Not shown: 36 genomes with orthologs for PS417_23250 only; 0 genomes with orthologs for PS417_02975 only