Conservation of cofitness between PS417_04365 and PS417_26775 in Pseudomonas simiae WCS417

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04365 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 1.0 PS417_26775 thiazole synthase 0.30 16
Pseudomonas fluorescens SBW25 1.00 PFLU_RS04420 HAD family hydrolase 1.00 PFLU_RS28420 thiazole synthase
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS04420 HAD family hydrolase 1.00 PFLU_RS28420 thiazole synthase
Pseudomonas sp. RS175 0.96 PFR28_00177 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.95 PFR28_04252 Thiazole synthase
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_07015 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.95 AO356_13375 thiazole synthase
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_3263 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.95 Pf6N2E2_4590 Thiazole biosynthesis protein ThiG
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_1076 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.95 Pf1N1B4_2331 Thiazole biosynthesis protein ThiG
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_05160 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.95 AO353_08215 thiazole synthase
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_5010 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.99 PfGW456L13_1000 Thiazole biosynthesis protein ThiG
Pseudomonas putida KT2440 0.88 PP_0956 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.91 PP_5104 thiazole synthase
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_4143 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI 0.91 Psyr_4740 thiazole-phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_4143 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI 0.91 Psyr_4740 thiazole-phosphate synthase 0.33 55
Pseudomonas stutzeri RCH2 0.84 Psest_3309 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 0.87 Psest_0267 Uncharacterized enzyme of thiazole biosynthesis
Pseudomonas sp. S08-1 0.82 OH686_08520 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.88 OH686_14285 Thiazole synthase
Marinobacter adhaerens HP15 0.57 HP15_2438 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 0.72 HP15_3274 thiazole synthase
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS19835 HAD family hydrolase 0.71 ABZR86_RS11645 thiazole synthase
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_2084 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 0.37 B158DRAFT_0291 thiazole-phosphate synthase
Dechlorosoma suillum PS 0.49 Dsui_1381 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 0.69 Dsui_1014 putative enzyme of thiazole biosynthesis
Shewanella amazonensis SB2B 0.48 Sama_3084 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq) 0.38 Sama_1856 thiG thiazole synthase (RefSeq)
Pantoea sp. MT58 0.48 IAI47_17165 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.32 IAI47_20700 thiazole synthase low > 76
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS19835 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.66 HSERO_RS02130 thiazole synthase low > 78
Rahnella sp. WP5 0.48 EX31_RS12420 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.38 EX31_RS16795 thiazole synthase low > 89
Enterobacter sp. TBS_079 0.47 MPMX20_04104 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.36 MPMX20_00213 Thiazole synthase low > 85
Enterobacter asburiae PDN3 0.47 EX28DRAFT_3252 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 0.36 EX28DRAFT_4532 Uncharacterized enzyme of thiazole biosynthesis low > 76
Serratia liquefaciens MT49 0.47 IAI46_22450 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.37 IAI46_01300 thiazole synthase low > 86
Acidovorax sp. GW101-3H11 0.47 Ac3H11_4271 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.32 Ac3H11_1059 Thiazole biosynthesis protein ThiG
Dickeya dadantii 3937 0.47 DDA3937_RS01550 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.38 DDA3937_RS01155 thiazole synthase low > 74
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_02285 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.68 OKGIIK_11895 thiS thiazole synthase
Escherichia coli ECRC101 0.47 OKFHMN_17960 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.38 OKFHMN_13395 thiG thiazole synthase
Escherichia coli Nissle 1917 0.47 ECOLIN_RS18405 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.37 ECOLIN_RS23020 thiazole synthase low > 52
Escherichia coli ECRC102 0.47 NIAGMN_15720 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.38 NIAGMN_11145 thiG thiazole synthase
Escherichia coli ECRC62 0.47 BNILDI_01775 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.38 BNILDI_05985 thiG thiazole synthase
Escherichia coli BW25113 0.47 b3198 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) 0.38 b3991 thiG thiamin biosynthesis, thiazole moiety (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_00502 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.38 OHPLBJKB_04060 Thiazole synthase low > 73
Escherichia coli ECOR27 0.47 NOLOHH_09760 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.38 NOLOHH_05540 thiG thiazole synthase low > 57
Escherichia fergusonii Becca 0.47 EFB2_00625 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.38 EFB2_04621 Thiazole synthase low > 86
Escherichia coli ECOR38 0.47 HEPCGN_16835 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.38 HEPCGN_12030 thiG thiazole synthase low > 85
Escherichia coli BL21 0.47 ECD_03063 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.38 ECD_03867 thiamine biosynthesis ThiGH complex subunit low > 60
Escherichia coli ECRC101 0.47 MCAODC_08480 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.38 MCAODC_03895 thiG thiazole synthase
Escherichia coli ECRC98 0.47 JDDGAC_21585 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.38 JDDGAC_17020 thiG thiazole synthase
Escherichia coli ECRC99 0.47 KEDOAH_10190 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.38 KEDOAH_14765 thiG thiazole synthase
Dickeya dianthicola 67-19 0.46 HGI48_RS01465 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.37 HGI48_RS01150 thiazole synthase low > 71
Dickeya dianthicola ME23 0.46 DZA65_RS01530 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.38 DZA65_RS01195 thiazole synthase low > 75
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS01775 HAD family hydrolase 0.35 QEN71_RS27930 thiazole synthase
Shewanella loihica PV-4 0.46 Shew_3307 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq) 0.36 Shew_2092 thiazole biosynthesis family protein (RefSeq)
Klebsiella michiganensis M5al 0.46 BWI76_RS25245 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.38 BWI76_RS01535 thiazole synthase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF2942 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.37 GFF4202 Thiazole biosynthesis protein ThiG low > 78
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_01923 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) 0.34 H281DRAFT_05639 thiazole-phosphate synthase
Shewanella oneidensis MR-1 0.45 SO3957 conserved hypothetical protein (NCBI ptt file) 0.35 SO2441 thiG thiG protein (NCBI ptt file)
Erwinia tracheiphila SCR3 0.45 LU632_RS21260 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.36 LU632_RS00950 thiazole synthase low > 74
Shewanella sp. ANA-3 0.45 Shewana3_0676 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq) 0.37 Shewana3_1940 thiG thiazole synthase (RefSeq)
Variovorax sp. OAS795 0.45 ABID97_RS02625 HAD hydrolase family protein 0.36 ABID97_RS15315 thiazole synthase low > 91
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1666.1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.70 Xcc-8004.1284.1 Thiazole biosynthesis protein ThiG low > 74
Lysobacter sp. OAE881 0.44 ABIE51_RS15935 HAD hydrolase family protein 0.71 ABIE51_RS16545 thiazole synthase
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS02925 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.34 BPHYT_RS17775 thiazole synthase
Pectobacterium carotovorum WPP14 0.44 HER17_RS20040 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.39 HER17_RS20400 thiazole synthase low > 75
Castellaniella sp019104865 MT123 0.44 ABCV34_RS14365 HAD hydrolase family protein 0.67 ABCV34_RS14510 thiazole synthase
Ralstonia solanacearum GMI1000 0.44 RS_RS02040 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.36 RS_RS00535 thiazole synthase
Synechococcus elongatus PCC 7942 0.44 Synpcc7942_2288 Phosphatase kdsC 0.46 Synpcc7942_0576 thiG thiazole synthase
Paraburkholderia graminis OAS925 0.44 ABIE53_000722 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) 0.34 ABIE53_003714 thiazole synthase
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS07080 HAD family hydrolase 0.37 ABZR87_RS04800 thiazole synthase
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_12795 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.39 CSW01_00355 thiazole synthase
Variovorax sp. SCN45 0.42 GFF3270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.35 GFF1188 Thiazole synthase (EC 2.8.1.10) low > 127
Ralstonia solanacearum PSI07 0.42 RPSI07_RS22110 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.37 RPSI07_RS23435 thiazole synthase
Ralstonia solanacearum UW163 0.41 UW163_RS02390 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.36 UW163_RS03655 thiazole synthase
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS11190 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.36 RALBFv3_RS09925 thiazole synthase
Alteromonas macleodii MIT1002 0.41 MIT1002_00831 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.38 MIT1002_00093 Thiazole synthase
Fusobacterium nucleatum SB010 0.37 HUW76_02570 HAD family hydrolase 0.35 HUW76_10275 thiazole synthase low > 35
Bacteroides thetaiotaomicron VPI-5482 0.37 BT1713 putative acylneuraminate cytidylyltransferase (NCBI ptt file) 0.36 BT0651 thiamine biosynthesis protein ThiG (NCBI ptt file) low > 81
Acinetobacter radioresistens SK82 0.37 MPMX26_01968 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.69 MPMX26_01107 Thiazole synthase
Desulfovibrio vulgaris Miyazaki F 0.36 DvMF_0431 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family (RefSeq) 0.33 DvMF_0800 thiG thiazole synthase (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.36 DVU1625 phosphatase, YrbI family (TIGR) 0.34 DVU2094 thiG thiG protein (TIGR)
Pontibacter actiniarum KMM 6156, DSM 19842 0.36 CA264_18675 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.40 CA264_20420 thiazole synthase low > 74
Bacteroides stercoris CC31F 0.35 HMPREF1181_RS01295 HAD-IIIA family hydrolase 0.35 HMPREF1181_RS14680 thiazole synthase low > 56
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF2443 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.34 GFF246 Thiazole biosynthesis protein ThiG
Echinicola vietnamensis KMM 6221, DSM 17526 0.35 Echvi_2130 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 0.39 Echvi_3564 Uncharacterized enzyme of thiazole biosynthesis 0.35 14
Pedobacter sp. GW460-11-11-14-LB5 0.31 CA265_RS03520 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.37 CA265_RS20180 thiazole synthase low > 88
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS12455 HAD-IIIA family hydrolase 0.37 ABI39_RS17755 thiazole synthase
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS16535 HAD-IIIA family hydrolase 0.37 HMPREF1058_RS03285 thiazole synthase
Bacteroides ovatus ATCC 8483 0.26 BACOVA_04421 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 0.36 BACOVA_02359 thiazole biosynthesis protein ThiG

Not shown: 3 genomes with orthologs for PS417_04365 only; 15 genomes with orthologs for PS417_26775 only