| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Variovorax sp. SCN45 | 1.0 | GFF4449 | | TldD protein, part of TldE/TldD proteolytic complex | 1.0 | GFF2572 | | Protein-export protein SecB (maintains pre-export unfolded state) | 0.90 | 20 |
| Variovorax sp. OAS795 | 0.95 | ABID97_RS06335 | | metalloprotease TldD | 0.87 | ABID97_RS07400 | | protein-export chaperone SecB | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.86 | Ac3H11_4036 | | TldD protein, part of TldE/TldD proteolytic complex | 0.77 | Ac3H11_3859 | | Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) | 0.35 | 42 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.85 | GFF580 | | TldD protein, part of TldE/TldD proteolytic complex | 0.78 | GFF1223 | | Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) | low | > 90 |
| Herbaspirillum seropedicae SmR1 | 0.73 | HSERO_RS07155 | | peptidase C69 | 0.65 | HSERO_RS00805 | | preprotein translocase subunit SecB | low | > 78 |
| Cupriavidus basilensis FW507-4G11 | 0.73 | RR42_RS05875 | | protease TldD | 0.56 | RR42_RS01840 | | preprotein translocase subunit SecB | — | — |
| Ralstonia sp. UNC404CL21Col | 0.72 | ABZR87_RS01105 | | metalloprotease TldD | 0.65 | ABZR87_RS06765 | | protein-export chaperone SecB | — | — |
| Ralstonia solanacearum GMI1000 | 0.72 | RS_RS13315 | | metalloprotease TldD | 0.65 | RS_RS01755 | | protein-export protein SecB | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.72 | BPHYT_RS03540 | | peptidase C69 | 0.65 | BPHYT_RS02605 | | protein-export protein SecB | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.72 | RALBFv3_RS05455 | | metalloprotease TldD | 0.65 | RALBFv3_RS10915 | | protein-export chaperone SecB | — | — |
| Ralstonia solanacearum UW163 | 0.72 | UW163_RS08170 | | metalloprotease TldD | 0.65 | UW163_RS02665 | | protein-export chaperone SecB | — | — |
| Ralstonia solanacearum PSI07 | 0.71 | RPSI07_RS11850 | | metalloprotease TldD | 0.66 | RPSI07_RS22395 | | protein-export chaperone SecB | low | > 81 |
| Paraburkholderia sabiae LMG 24235 | 0.71 | QEN71_RS26555 | | metalloprotease TldD | 0.65 | QEN71_RS01460 | | protein-export chaperone SecB | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.71 | H281DRAFT_04688 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.65 | H281DRAFT_02001 | | protein translocase subunit secB | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.71 | ABIE53_000851 | | TldD protein | 0.63 | ABIE53_000666 | | preprotein translocase subunit SecB | low | > 113 |
| Castellaniella sp019104865 MT123 | 0.70 | ABCV34_RS02590 | | metalloprotease TldD | 0.57 | ABCV34_RS14255 | | protein-export chaperone SecB | low | > 48 |
| Dechlorosoma suillum PS | 0.67 | Dsui_3401 | | putative Zn-dependent protease-like protein | 0.50 | Dsui_1275 | | protein-export chaperone SecB | low | > 51 |
| Dyella japonica UNC79MFTsu3.2 | 0.62 | ABZR86_RS21715 | | metalloprotease TldD | 0.38 | ABZR86_RS13255 | | protein-export chaperone SecB | — | — |
| Rhodanobacter sp. FW510-T8 | 0.61 | OKGIIK_10280 | tldD | metalloprotease TldD | 0.37 | OKGIIK_13020 | secB | protein-export chaperone SecB | — | — |
| Rhodanobacter denitrificans MT42 | 0.59 | LRK55_RS03145 | | metalloprotease TldD | 0.37 | LRK55_RS10545 | | protein-export chaperone SecB | — | — |
| Alteromonas macleodii MIT1002 | 0.59 | MIT1002_00227 | | protease TldD | 0.42 | MIT1002_00486 | | Protein-export protein SecB | low | > 70 |
| Rhodanobacter denitrificans FW104-10B01 | 0.59 | LRK54_RS03395 | | metalloprotease TldD | 0.37 | LRK54_RS10855 | | protein-export chaperone SecB | low | > 59 |
| Shewanella sp. ANA-3 | 0.58 | Shewana3_3641 | | microcin-processing peptidase 2 (RefSeq) | 0.40 | Shewana3_0053 | | preprotein translocase subunit SecB (RefSeq) | — | — |
| Pseudomonas putida KT2440 | 0.58 | PP_0940 | | putative protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD | 0.36 | PP_5053 | | Protein-export protein SecB | low | > 96 |
| Lysobacter sp. OAE881 | 0.58 | ABIE51_RS06795 | | metalloprotease TldD | 0.40 | ABIE51_RS00490 | | protein-export chaperone SecB | low | > 62 |
| Pantoea sp. MT58 | 0.58 | IAI47_02465 | | metalloprotease TldD | 0.38 | IAI47_00735 | | protein-export chaperone SecB | low | > 76 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | 0.38 | Psyr_4882 | | protein translocase subunit secB | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | 0.38 | Psyr_4882 | | protein translocase subunit secB | low | > 86 |
| Shewanella oneidensis MR-1 | 0.57 | SO4091 | tldD | tldD protein (NCBI ptt file) | 0.39 | SO0052 | secB | protein-export protein SecB (NCBI ptt file) | — | — |
| Shewanella loihica PV-4 | 0.56 | Shew_0410 | | peptidase U62, modulator of DNA gyrase (RefSeq) | 0.40 | Shew_3804 | | preprotein translocase subunit SecB (RefSeq) | — | — |
| Serratia liquefaciens MT49 | 0.56 | IAI46_22685 | | metalloprotease TldD | 0.39 | IAI46_24695 | | protein-export chaperone SecB | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.56 | AO353_05215 | | protease TldD | 0.38 | AO353_12130 | | preprotein translocase subunit SecB | low | > 101 |
| Pseudomonas fluorescens SBW25 | 0.56 | PFLU_RS04340 | | metalloprotease TldD | 0.37 | PFLU_RS01670 | | protein-export chaperone SecB | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.56 | PFLU_RS04340 | | metalloprotease TldD | 0.37 | PFLU_RS01670 | | protein-export chaperone SecB | low | > 109 |
| Pseudomonas simiae WCS417 | 0.56 | PS417_04285 | | protease TldD | 0.37 | PS417_01620 | | preprotein translocase subunit SecB | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.56 | Psest_3320 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.37 | Psest_0165 | | protein-export chaperone SecB | low | > 67 |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS01460 | | metalloprotease TldD | 0.39 | DDA3937_RS20410 | | protein-export chaperone SecB | low | > 74 |
| Pseudomonas sp. RS175 | 0.56 | PFR28_00161 | | Metalloprotease TldD | 0.37 | PFR28_04941 | | Protein-export protein SecB | low | > 88 |
| Dickeya dianthicola 67-19 | 0.56 | HGI48_RS01380 | | metalloprotease TldD | 0.38 | HGI48_RS00790 | | protein-export chaperone SecB | low | > 71 |
| Pseudomonas fluorescens FW300-N1B4 | 0.56 | Pf1N1B4_1092 | | TldD protein, part of TldE/TldD proteolytic complex | 0.38 | Pf1N1B4_1614 | | Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_07095 | | protease TldD | 0.38 | AO356_09755 | | preprotein translocase subunit SecB | low | > 104 |
| Pseudomonas sp. S08-1 | 0.55 | OH686_08580 | | TldD protein, part of TldE/TldD proteolytic complex | 0.34 | OH686_14670 | | protein-export chaperone SecB | low | > 80 |
| Dickeya dianthicola ME23 | 0.55 | DZA65_RS01440 | | metalloprotease TldD | 0.38 | DZA65_RS00845 | | protein-export chaperone SecB | low | > 75 |
| Enterobacter sp. TBS_079 | 0.55 | MPMX20_04151 | | Metalloprotease TldD | 0.39 | MPMX20_00124 | | Protein-export protein SecB | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.55 | Pf6N2E2_3280 | | TldD protein, part of TldE/TldD proteolytic complex | 0.37 | Pf6N2E2_3829 | | Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) | 0.24 | 81 |
| Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_5026 | | TldD protein, part of TldE/TldD proteolytic complex | 0.39 | PfGW456L13_350 | | Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) | low | > 87 |
| Klebsiella michiganensis M5al | 0.55 | BWI76_RS25470 | | metalloprotease TldD | 0.41 | BWI76_RS27215 | | protein-export protein SecB | — | — |
| Escherichia coli ECOR27 | 0.55 | NOLOHH_09555 | tldD | metalloprotease TldD | 0.39 | NOLOHH_07630 | secB | protein-export chaperone SecB | low | > 75 |
| Escherichia coli ECRC99 | 0.55 | KEDOAH_10395 | tldD | metalloprotease TldD | 0.39 | KEDOAH_12400 | secB | protein-export chaperone SecB | — | — |
| Shewanella amazonensis SB2B | 0.55 | Sama_0474 | | TldD protein (RefSeq) | 0.45 | Sama_0062 | | preprotein translocase subunit SecB (RefSeq) | — | — |
| Escherichia coli ECRC101 | 0.55 | MCAODC_08275 | tldD | metalloprotease TldD | 0.39 | MCAODC_06260 | secB | protein-export chaperone SecB | — | — |
| Escherichia fergusonii Becca | 0.55 | EFB2_00586 | | Metalloprotease TldD | 0.39 | EFB2_00201 | | Protein-export protein SecB | — | — |
| Escherichia coli BW25113 | 0.55 | b3244 | tldD | predicted peptidase (NCBI) | 0.39 | b3609 | secB | export protein SecB (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.55 | NIAGMN_15515 | tldD | metalloprotease TldD | 0.39 | NIAGMN_13510 | secB | protein-export chaperone SecB | — | — |
| Escherichia coli Nissle 1917 | 0.55 | ECOLIN_RS18595 | | metalloprotease TldD | 0.39 | ECOLIN_RS20600 | | protein-export chaperone SecB | — | — |
| Escherichia coli ECOR38 | 0.55 | HEPCGN_16620 | tldD | metalloprotease TldD | 0.39 | HEPCGN_14590 | secB | protein-export chaperone SecB | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.55 | OHPLBJKB_00460 | | Metalloprotease TldD | 0.39 | OHPLBJKB_00090 | | Protein-export protein SecB | — | — |
| Escherichia coli ECRC98 | 0.55 | JDDGAC_21380 | tldD | metalloprotease TldD | 0.39 | JDDGAC_19375 | secB | protein-export chaperone SecB | — | — |
| Escherichia coli ECRC62 | 0.55 | BNILDI_01980 | tldD | metalloprotease TldD | 0.39 | BNILDI_03885 | secB | protein-export chaperone SecB | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.55 | CSW01_02220 | | metalloprotease TldD | 0.36 | CSW01_13410 | | protein-export protein SecB | low | > 62 |
| Escherichia coli BL21 | 0.55 | ECD_03104 | | putative peptidase | 0.39 | ECD_03467 | | protein export chaperone | — | — |
| Pectobacterium carotovorum WPP14 | 0.55 | HER17_RS20140 | | metalloprotease TldD | 0.39 | HER17_RS20740 | | protein-export chaperone SecB | low | > 75 |
| Escherichia coli ECRC100 | 0.55 | OKFHMN_17755 | tldD | metalloprotease TldD | 0.39 | OKFHMN_15750 | secB | protein-export chaperone SecB | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.55 | GFF2140 | | TldD protein, part of TldE/TldD proteolytic complex | 0.39 | GFF401 | | Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_3295 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.39 | EX28DRAFT_3860 | | protein-export chaperone SecB | — | — |
| Magnetospirillum magneticum AMB-1 | 0.54 | AMB_RS21030 | | metalloprotease TldD | 0.26 | AMB_RS22995 | | protein-export protein SecB | low | > 64 |
| Rahnella sp. WP5 | 0.54 | EX31_RS12265 | | metalloprotease TldD | 0.42 | EX31_RS14345 | | protein-export chaperone SecB | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.54 | LU632_RS21420 | tldD | metalloprotease TldD | 0.39 | LU632_RS21880 | secB | protein-export chaperone SecB | low | > 74 |
| Azospirillum brasilense Sp245 | 0.52 | AZOBR_RS10600 | | peptidase C69 | 0.33 | AZOBR_RS01720 | | preprotein translocase subunit SecB | low | > 97 |
| Rhizobium sp. OAE497 | 0.51 | ABIE40_RS04050 | | metalloprotease TldD | 0.35 | ABIE40_RS19265 | | protein-export chaperone SecB | low | > 107 |
| Caulobacter crescentus NA1000 Δfur | 0.51 | CCNA_03522 | | Zn-dependent protease TldD | 0.31 | CCNA_03858 | | protein translocase subunit secB | low | > 67 |
| Caulobacter crescentus NA1000 | 0.51 | CCNA_03522 | | Zn-dependent protease TldD | 0.31 | CCNA_03858 | | protein translocase subunit secB | low | > 66 |
| Agrobacterium fabrum C58 | 0.50 | Atu0765 | | TldD | 0.31 | Atu0006 | | protein-export protein SECB | — | — |
| Sinorhizobium meliloti 1021 | 0.50 | SMc00960 | | hypothetical protein | 0.33 | SMc02788 | | preprotein translocase subunit SecB | — | — |
| Rhodopseudomonas palustris CGA009 | 0.50 | TX73_004255 | | metalloprotease TldD | 0.33 | TX73_001570 | | protein-export chaperone SecB | low | > 86 |
| Phaeobacter inhibens DSM 17395 | 0.49 | PGA1_c06240 | | protein TldD | 0.29 | PGA1_c35180 | | protein-export protein SecB | — | — |
Not shown: 14 genomes with orthologs for GFF4449 only; 3 genomes with orthologs for GFF2572 only