Conservation of cofitness between GFF4040 and GFF2032 in Hydrogenophaga sp. GW460-11-11-14-LB1

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4040 Cell division trigger factor (EC 5.2.1.8) 1.0 GFF2032 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) 0.75 14
Acidovorax sp. GW101-3H11 0.84 Ac3H11_934 Cell division trigger factor (EC 5.2.1.8) 0.21 Ac3H11_1612 ABC transporter, permease protein low > 79
Variovorax sp. SCN45 0.84 GFF490 Cell division trigger factor (EC 5.2.1.8) 0.23 GFF5033 ABC-type spermidine/putrescine transport system, permease component II low > 127
Variovorax sp. OAS795 0.83 ABID97_RS17605 trigger factor 0.22 ABID97_RS04045 ABC transporter permease low > 91
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_00895 trigger factor 0.43 H281DRAFT_05183 putrescine transport system permease protein low > 103
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS21990 trigger factor 0.45 QEN71_RS12960 ABC transporter permease subunit — —
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS09445 trigger factor 0.49 BPHYT_RS23135 putrescine/spermidine ABC transporter permease — —
Ralstonia solanacearum UW163 0.56 UW163_RS14665 trigger factor 0.15 UW163_RS14560 ABC transporter permease — —
Ralstonia solanacearum IBSBF1503 0.56 RALBFv3_RS01355 trigger factor 0.15 RALBFv3_RS01250 ABC transporter permease — —
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS12800 trigger factor 0.20 ABZR87_RS22470 ABC transporter permease low > 80
Ralstonia solanacearum PSI07 0.56 RPSI07_RS16120 trigger factor 0.15 RPSI07_RS16225 ABC transporter permease low > 81
Ralstonia solanacearum GMI1000 0.56 RS_RS08640 trigger factor 0.15 RS_RS08745 ABC transporter permease low > 80
Paraburkholderia graminis OAS925 0.56 ABIE53_002114 trigger factor 0.43 ABIE53_002367 putrescine transport system permease protein low > 113
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS12920 trigger factor 0.18 HSERO_RS05400 polyamine ABC transporter permease low > 78
Castellaniella sp019104865 MT123 0.52 ABCV34_RS05140 trigger factor 0.41 ABCV34_RS02375 ABC transporter permease subunit — —
Pseudomonas sp. S08-1 0.40 OH686_03650 trigger factor 0.41 OH686_11445 Putrescine transport system permease protein PotI low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF4352 Cell division trigger factor (EC 5.2.1.8) 0.42 GFF761 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 78
Rahnella sp. WP5 0.39 EX31_RS22240 trigger factor 0.42 EX31_RS09615 putrescine ABC transporter permease PotI low > 89
Escherichia coli Nissle 1917 0.39 ECOLIN_RS02620 trigger factor 0.40 ECOLIN_RS04565 putrescine ABC transporter permease PotI — —
Serratia liquefaciens MT49 0.39 IAI46_05005 trigger factor 0.43 IAI46_08385 putrescine ABC transporter permease PotI low > 86
Escherichia coli BW25113 0.39 b0436 tig trigger factor (NCBI) 0.40 b0857 potI putrescine transporter subunit: membrane component of ABC superfamily (NCBI) low > 76
Escherichia coli ECRC98 0.39 JDDGAC_11995 tig trigger factor 0.40 JDDGAC_09580 potI putrescine ABC transporter permease PotI — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_03237 Trigger factor 0.39 OHPLBJKB_02811 Inner membrane ABC transporter permease protein YdcV low > 73
Escherichia coli ECRC101 0.39 OKFHMN_08340 tig trigger factor 0.40 OKFHMN_05945 potI putrescine ABC transporter permease PotI — —
Escherichia coli BL21 0.39 ECD_00387 peptidyl-prolyl cis/trans isomerase (trigger factor) 0.39 ECD_00862 putrescine ABC transporter permease low > 60
Escherichia coli ECOR27 0.39 NOLOHH_01275 tig trigger factor 0.40 NOLOHH_22315 potI putrescine ABC transporter permease PotI low > 57
Escherichia coli ECOR38 0.39 HEPCGN_06955 tig trigger factor 0.39 HEPCGN_02085 potI putrescine ABC transporter permease PotI low > 85
Escherichia coli ECRC99 0.39 KEDOAH_19625 tig trigger factor 0.40 KEDOAH_21965 potI putrescine ABC transporter permease PotI — —
Escherichia coli ECRC102 0.39 NIAGMN_06395 tig trigger factor 0.40 NIAGMN_03990 potI putrescine ABC transporter permease PotI — —
Escherichia coli ECRC101 0.39 MCAODC_27565 tig trigger factor 0.40 MCAODC_25160 potI putrescine ABC transporter permease PotI — —
Shewanella amazonensis SB2B 0.39 Sama_1223 tig trigger factor (RefSeq) 0.43 Sama_2639 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.41 7
Escherichia fergusonii Becca 0.39 EFB2_03621 Trigger factor 0.40 EFB2_03204 Inner membrane ABC transporter permease protein YdcV low > 86
Escherichia coli ECRC62 0.39 BNILDI_22690 tig trigger factor 0.40 BNILDI_20570 potH putrescine ABC transporter permease PotH — —
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_2551 Cell division trigger factor (EC 5.2.1.8) 0.39 PfGW456L13_932 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 87
Klebsiella michiganensis M5al 0.39 BWI76_RS06520 trigger factor 0.39 BWI76_RS09475 putrescine ABC transporter permease PotI low > 92
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_3944 Cell division trigger factor (EC 5.2.1.8) 0.41 Pf1N1B4_4350 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) — —
Pseudomonas putida KT2440 0.38 PP_2299 Trigger factor 0.40 PP_5177 spermidine/putrescine ABC transporter - permease subunit low > 96
Shewanella loihica PV-4 0.38 Shew_2509 tig trigger factor (RefSeq) 0.41 Shew_0976 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_2219 Cell division trigger factor (EC 5.2.1.8) 0.39 Pf6N2E2_4517 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 103
Enterobacter sp. TBS_079 0.38 MPMX20_01027 Trigger factor 0.41 MPMX20_01498 Inner membrane ABC transporter permease protein YdcV low > 85
Pseudomonas fluorescens SBW25 0.38 PFLU_RS19175 trigger factor 0.40 PFLU_RS28755 ABC transporter permease subunit low > 109
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_1746 Trigger factor 0.39 Psyr_4861 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_1746 Trigger factor 0.39 Psyr_4861 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS19175 trigger factor 0.40 PFLU_RS28755 ABC transporter permease subunit low > 109
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_09620 trigger factor 0.25 CSW01_07150 spermidine/putrescine ABC transporter permease PotC low > 62
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_01755 trigger factor 0.39 AO356_13175 spermidine/putrescine ABC transporter permease low > 104
Pseudomonas stutzeri RCH2 0.38 Psest_2288 trigger factor 0.41 Psest_4280 ABC-type spermidine/putrescine transport system, permease component II low > 67
Enterobacter asburiae PDN3 0.38 EX28DRAFT_2535 trigger factor 0.41 EX28DRAFT_2096 ABC-type spermidine/putrescine transport system, permease component II low > 76
Pseudomonas simiae WCS417 0.38 PS417_17240 trigger factor 0.40 PS417_27105 spermidine/putrescine ABC transporter permease low > 88
Pectobacterium carotovorum WPP14 0.38 HER17_RS15855 trigger factor 0.41 HER17_RS12485 putrescine ABC transporter permease PotI low > 75
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_20170 trigger factor 0.41 AO353_29320 putrescine ABC transporter, permease component (from data) low > 101
Pantoea sp. MT58 0.37 IAI47_14660 trigger factor 0.43 IAI47_13030 putrescine ABC transporter permease PotI low > 76
Dickeya dianthicola ME23 0.37 DZA65_RS06005 trigger factor 0.41 DZA65_RS09805 putrescine ABC transporter permease PotI low > 75
Dickeya dianthicola 67-19 0.37 HGI48_RS05680 trigger factor 0.41 HGI48_RS09495 putrescine ABC transporter permease PotI low > 71
Dickeya dadantii 3937 0.37 DDA3937_RS05635 trigger factor 0.42 DDA3937_RS09475 putrescine ABC transporter permease PotI low > 74
Pseudomonas sp. RS175 0.37 PFR28_01227 Trigger factor 0.41 PFR28_04291 Inner membrane ABC transporter permease protein YdcV low > 88
Marinobacter adhaerens HP15 0.37 HP15_2186 trigger factor 0.43 HP15_937 spermidine/putrescine ABC transporter, permease protein low > 73
Shewanella oneidensis MR-1 0.36 SO1793 tig trigger factor (NCBI ptt file) 0.44 SO1273 polyamine ABC transporter, permease protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.36 Shewana3_2662 tig trigger factor (RefSeq) 0.43 Shewana3_3094 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 73
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.4049.1 Cell division trigger factor (EC 5.2.1.8) 0.40 Xcc-8004.2212.1 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) low > 74
Rhodospirillum rubrum S1H 0.26 Rru_A1549 Trigger factor (NCBI) 0.46 Rru_A1015 Binding-protein-dependent transport systems inner membrane component (NCBI) low > 58
Bosea sp. OAE506 0.25 ABIE41_RS18065 trigger factor 0.35 ABIE41_RS21635 ABC transporter permease subunit low > 77
Magnetospirillum magneticum AMB-1 0.25 AMB_RS14050 trigger factor 0.47 AMB_RS13195 putrescine ABC transporter permease PotI — —
Azospirillum brasilense Sp245 0.24 AZOBR_RS07130 trigger factor 0.46 AZOBR_RS08830 putrescine/spermidine ABC transporter permease low > 97
Azospirillum sp. SherDot2 0.23 MPMX19_01549 Trigger factor 0.47 MPMX19_04880 Inner membrane ABC transporter permease protein YdcV — —
Caulobacter crescentus NA1000 0.23 CCNA_02042 trigger factor chaperone 0.28 CCNA_03236 spermidine/putrescine transport system permease protein potC low > 66
Caulobacter crescentus NA1000 Δfur 0.23 CCNA_02042 trigger factor chaperone 0.28 CCNA_03236 spermidine/putrescine transport system permease protein potC low > 67
Rhodopseudomonas palustris CGA009 0.23 TX73_015360 trigger factor 0.40 TX73_021555 ABC transporter permease subunit low > 86
Sinorhizobium meliloti 1021 0.22 SMc02050 trigger factor 0.41 SMc00773 putrescine ABC transporter permease low > 103
Dinoroseobacter shibae DFL-12 0.21 Dshi_2190 trigger factor (RefSeq) 0.18 Dshi_1598 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 64
Agrobacterium fabrum C58 0.21 Atu1664 trigger factor 0.39 Atu0612 ABC transporter, membrane spanning protein — —
Rhizobium sp. OAE497 0.21 ABIE40_RS08600 trigger factor 0.40 ABIE40_RS03280 ABC transporter permease subunit low > 107
Phaeobacter inhibens DSM 17395 0.20 PGA1_c18160 trigger factor Tig 0.40 PGA1_c34450 putrescine transport system permease protein PotI low > 62
Desulfovibrio vulgaris Hildenborough JW710 0.17 DVU1334 tig trigger factor (TIGR) 0.30 DVU0096 potC polyamine ABC transporter, permease protein (TIGR) — —
Fusobacterium nucleatum SB010 0.17 HUW76_01050 trigger factor 0.28 HUW76_00740 ABC transporter permease low > 35
Desulfovibrio vulgaris Miyazaki F 0.17 DvMF_0109 trigger factor (RefSeq) 0.27 DvMF_1958 potC spermidine/putrescine ABC transporter membrane protein (RefSeq) — —

Not shown: 15 genomes with orthologs for GFF4040 only; 4 genomes with orthologs for GFF2032 only