| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_3321 | | DNA repair protein RadC-like protein | 1.0 | HP15_1144 | | protein belonging to uncharacterized protein family UPF0061 | 0.40 | 4 |
| Vibrio cholerae E7946 ATCC 55056 | 0.58 | CSW01_01155 | | DNA repair protein RadC | 0.48 | CSW01_09655 | | SELO family protein | low | > 62 |
| Pseudomonas stutzeri RCH2 | 0.58 | Psest_3803 | | DNA repair protein radc | 0.41 | Psest_0396 | | Uncharacterized conserved protein | low | > 67 |
| Pseudomonas fluorescens FW300-N2E3 | 0.57 | AO353_09220 | | hypothetical protein | 0.41 | AO353_12770 | | hypothetical protein | low | > 101 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.56 | Psyr_0222 | | DNA replication and repair protein RadC | 0.41 | Psyr_0494 | | Protein of unknown function UPF0061 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.56 | Psyr_0222 | | DNA replication and repair protein RadC | 0.41 | Psyr_0494 | | Protein of unknown function UPF0061 | low | > 86 |
| Pseudomonas sp. RS175 | 0.56 | PFR28_04412 | | hypothetical protein | 0.42 | PFR28_05043 | | Protein adenylyltransferase SelO | low | > 88 |
| Shewanella amazonensis SB2B | 0.55 | Sama_0327 | radC | DNA repair protein RadC (RefSeq) | 0.33 | Sama_2755 | | hypothetical protein (RefSeq) | low | > 62 |
| Pseudomonas fluorescens FW300-N2E2 | 0.55 | Pf6N2E2_4377 | | DNA repair protein RadC | 0.40 | Pf6N2E2_3692 | | Selenoprotein O and cysteine-containing homologs | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.54 | Pf1N1B4_2126 | | DNA repair protein RadC | 0.40 | Pf1N1B4_1498 | | Selenoprotein O and cysteine-containing homologs | low | > 87 |
| Shewanella loihica PV-4 | 0.54 | Shew_3481 | | DNA repair protein RadC (RefSeq) | 0.42 | Shew_0262 | | hypothetical protein (RefSeq) | low | > 60 |
| Pseudomonas sp. S08-1 | 0.54 | OH686_13620 | | UPF0758 family protein | 0.41 | OH686_09805 | | UPF0061 protein YdiU | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.53 | AO356_12545 | | hypothetical protein | 0.40 | AO356_09050 | | hypothetical protein | low | > 104 |
| Pseudomonas fluorescens SBW25-INTG | 0.53 | PFLU_RS29445 | | JAB domain-containing protein | 0.40 | PFLU_RS02195 | | YdiU family protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.53 | PFLU_RS29445 | | JAB domain-containing protein | 0.40 | PFLU_RS02195 | | YdiU family protein | low | > 109 |
| Pseudomonas simiae WCS417 | 0.53 | PS417_27770 | | hypothetical protein | 0.41 | PS417_02140 | | hypothetical protein | low | > 88 |
| Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS00330 | | DNA repair protein RadC | 0.40 | ABZR87_RS12630 | | protein adenylyltransferase SelO | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.52 | RS_RS12270 | | JAB domain-containing protein | 0.40 | RS_RS08830 | | YdiU family protein | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.52 | RPSI07_RS12675 | | JAB domain-containing protein | 0.40 | RPSI07_RS16295 | | YdiU family protein | low | > 81 |
| Shewanella oneidensis MR-1 | 0.52 | SO4248 | radC | DNA repair protein RadC (NCBI ptt file) | 0.40 | SO0330 | | conserved hypothetical protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.52 | Shewana3_3770 | radC | DNA repair protein RadC (RefSeq) | 0.39 | Shewana3_3841 | | hypothetical protein (RefSeq) | low | > 73 |
| Dechlorosoma suillum PS | 0.52 | Dsui_1537 | | DNA repair protein radc | 0.30 | Dsui_1465 | | hypothetical protein | low | > 51 |
| Rhodanobacter denitrificans MT42 | 0.51 | LRK55_RS08695 | | DNA repair protein RadC | 0.36 | LRK55_RS15710 | | YdiU family protein | low | > 63 |
| Dickeya dadantii 3937 | 0.51 | DDA3937_RS20515 | | DNA repair protein RadC | 0.46 | DDA3937_RS12935 | | YdiU family protein | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.51 | LRK54_RS09165 | | DNA repair protein RadC | 0.36 | LRK54_RS15955 | | YdiU family protein | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.51 | OKGIIK_15660 | radC | DNA repair protein RadC | 0.36 | OKGIIK_09030 | selO | YdiU family protein | low | > 52 |
| Ralstonia solanacearum IBSBF1503 | 0.51 | RALBFv3_RS04710 | | JAB domain-containing protein | 0.39 | RALBFv3_RS01180 | | YdiU family protein | low | > 76 |
| Serratia liquefaciens MT49 | 0.51 | IAI46_24825 | | DNA repair protein RadC | 0.44 | IAI46_11065 | | YdiU family protein | low | > 86 |
| Ralstonia solanacearum UW163 | 0.51 | UW163_RS08960 | | JAB domain-containing protein | 0.39 | UW163_RS14490 | | YdiU family protein | — | — |
| Dickeya dianthicola 67-19 | 0.51 | HGI48_RS00700 | | DNA repair protein RadC | 0.45 | HGI48_RS13010 | | YdiU family protein | low | > 71 |
| Dickeya dianthicola ME23 | 0.51 | DZA65_RS00755 | | JAB domain-containing protein | 0.46 | DZA65_RS13470 | | YdiU family protein | low | > 75 |
| Pseudomonas fluorescens GW456-L13 | 0.51 | PfGW456L13_798 | | DNA repair protein RadC | 0.40 | PfGW456L13_231 | | Selenoprotein O and cysteine-containing homologs | low | > 87 |
| Escherichia coli BW25113 | 0.50 | b3638 | radC | DNA repair protein (VIMSS) | 0.43 | b1706 | ydiU | hypothetical protein (NCBI) | low | > 76 |
| Dyella japonica UNC79MFTsu3.2 | 0.50 | ABZR86_RS15615 | | DNA repair protein RadC | 0.35 | ABZR86_RS00335 | | protein adenylyltransferase SelO | low | > 74 |
| Escherichia coli ECRC98 | 0.50 | JDDGAC_19245 | radC | DNA repair protein RadC | 0.43 | JDDGAC_01700 | selO | protein adenylyltransferase SelO | low | > 86 |
| Escherichia coli ECOR27 | 0.50 | NOLOHH_07500 | radC | DNA repair protein RadC | 0.44 | NOLOHH_17645 | selO | protein adenylyltransferase SelO | low | > 75 |
| Escherichia fergusonii Becca | 0.50 | EFB2_00175 | | hypothetical protein | 0.43 | EFB2_02285 | | Protein adenylyltransferase SelO | low | > 86 |
| Escherichia coli ECRC101 | 0.50 | MCAODC_06130 | radC | DNA repair protein RadC | 0.43 | MCAODC_18285 | selO | protein adenylyltransferase SelO | low | > 87 |
| Escherichia coli ECRC102 | 0.50 | NIAGMN_13380 | radC | DNA repair protein RadC | 0.43 | NIAGMN_00940 | selO | protein adenylyltransferase SelO | — | — |
| Escherichia coli ECRC99 | 0.50 | KEDOAH_12530 | radC | DNA repair protein RadC | 0.43 | KEDOAH_00985 | selO | protein adenylyltransferase SelO | — | — |
| Escherichia coli ECOR38 | 0.50 | HEPCGN_14445 | radC | DNA repair protein RadC | 0.44 | HEPCGN_05490 | selO | protein adenylyltransferase SelO | low | > 87 |
| Escherichia coli ECRC100 | 0.50 | OKFHMN_15620 | radC | DNA repair protein RadC | 0.43 | OKFHMN_27125 | selO | protein adenylyltransferase SelO | low | > 80 |
| Escherichia coli Nissle 1917 | 0.50 | ECOLIN_RS20730 | | DNA repair protein RadC | 0.43 | ECOLIN_RS09535 | | protein adenylyltransferase SelO | low | > 55 |
| Escherichia coli BL21 | 0.49 | ECD_03495 | | UPF0758 family protein | 0.44 | ECD_01675 | | UPF0061 family protein | low | > 61 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.49 | GFF1170 | | DNA repair protein RadC | 0.39 | GFF4580 | | Selenoprotein O and cysteine-containing homologs | low | > 90 |
| Enterobacter asburiae PDN3 | 0.49 | EX28DRAFT_3888 | | DNA repair protein radc | 0.44 | EX28DRAFT_1713 | | Uncharacterized conserved protein | low | > 76 |
| Enterobacter sp. TBS_079 | 0.48 | MPMX20_00097 | | hypothetical protein | 0.44 | MPMX20_01907 | | Protein adenylyltransferase SelO | low | > 85 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.48 | Xcc-8004.4897.1 | | DNA repair protein RadC | 0.36 | Xcc-8004.2272.1 | | Selenoprotein O and cysteine-containing homologs | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.48 | GFF371 | | DNA repair protein RadC | 0.45 | GFF3534 | | Selenoprotein O and cysteine-containing homologs | low | > 78 |
| Pseudomonas putida KT2440 | 0.48 | PP_5284 | | UPF0758 protein PP_5284 | 0.42 | PP_5068 | | conserved protein of unknown function, UPF0061 family | low | > 96 |
| Pantoea sp. MT58 | 0.48 | IAI47_00620 | | DNA repair protein RadC | 0.42 | IAI47_10920 | | YdiU family protein | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.48 | LU632_RS21995 | radC | DNA repair protein RadC | 0.42 | LU632_RS10980 | | YdiU family protein | low | > 74 |
| Cupriavidus basilensis FW507-4G11 | 0.47 | RR42_RS16995 | | hypothetical protein | 0.43 | RR42_RS11160 | | hypothetical protein | low | > 128 |
| Pectobacterium carotovorum WPP14 | 0.47 | HER17_RS20830 | | DNA repair protein RadC | 0.46 | HER17_RS08850 | | YdiU family protein | low | > 75 |
| Rahnella sp. WP5 | 0.47 | EX31_RS14470 | | JAB domain-containing protein | 0.45 | EX31_RS13970 | | YdiU family protein | low | > 89 |
| Klebsiella michiganensis M5al | 0.46 | BWI76_RS27365 | | hypothetical protein | 0.44 | BWI76_RS17085 | | hypothetical protein | low | > 92 |
| Castellaniella sp019104865 MT123 | 0.46 | ABCV34_RS00910 | | DNA repair protein RadC | 0.36 | ABCV34_RS04315 | | YdiU family protein | low | > 48 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.46 | H281DRAFT_04066 | | DNA replication and repair protein RadC | 0.42 | H281DRAFT_00914 | | Uncharacterized conserved protein YdiU, UPF0061 family | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.45 | ABIE53_003289 | | DNA repair protein RadC | 0.43 | ABIE53_002149 | | uncharacterized protein YdiU (UPF0061 family) | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS03085 | | DNA repair protein RadC | 0.41 | QEN71_RS21900 | | YdiU family protein | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.45 | BPHYT_RS15625 | | hypothetical protein | 0.43 | BPHYT_RS09550 | | hypothetical protein | low | > 109 |
| Variovorax sp. SCN45 | 0.44 | GFF5700 | | UPF0758 family protein | 0.40 | GFF1330 | | UPF0061 protein YdiU | low | > 127 |
| Variovorax sp. OAS795 | 0.44 | ABID97_RS07700 | | DNA repair protein RadC | 0.40 | ABID97_RS15700 | | protein adenylyltransferase SelO | low | > 91 |
| Lysobacter sp. OAE881 | 0.44 | ABIE51_RS00095 | | DNA repair protein RadC | 0.37 | ABIE51_RS12255 | | protein adenylyltransferase SelO | low | > 62 |
| Herbaspirillum seropedicae SmR1 | 0.43 | HSERO_RS05945 | | hypothetical protein | 0.41 | HSERO_RS11220 | | hypothetical protein | low | > 78 |
| Acidovorax sp. GW101-3H11 | 0.41 | Ac3H11_1774 | | DNA repair protein RadC | 0.43 | Ac3H11_2534 | | Selenoprotein O and cysteine-containing homologs | low | > 79 |
| Acinetobacter radioresistens SK82 | 0.38 | MPMX26_02636 | | hypothetical protein | 0.33 | MPMX26_02624 | | Protein adenylyltransferase SelO | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.29 | CA264_13835 | | hypothetical protein | 0.31 | CA264_03360 | | hypothetical protein | low | > 74 |
| Dinoroseobacter shibae DFL-12 | 0.27 | Dshi_3569 | | DNA repair protein RadC (RefSeq) | 0.33 | Dshi_1157 | | protein of unknown function UPF0061 (RefSeq) | low | > 64 |
| Phaeobacter inhibens DSM 17395 | 0.25 | PGA1_c34550 | | DNA repair protein RadC | 0.31 | PGA1_c11360 | | Uncharacterized conserved protein | low | > 62 |
| Bosea sp. OAE506 | 0.23 | ABIE41_RS13815 | | DNA repair protein RadC | 0.32 | ABIE41_RS01530 | | protein adenylyltransferase SelO | low | > 77 |
| Rhodopseudomonas palustris CGA009 | 0.22 | TX73_002000 | | DNA repair protein RadC | 0.33 | TX73_015750 | | YdiU family protein | low | > 86 |