Conservation of cofitness between EX28DRAFT_0753 and EX28DRAFT_0165 in Enterobacter asburiae PDN3

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_0753 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 1.0 EX28DRAFT_0165 exopolyphosphatase 0.57 19
Enterobacter sp. TBS_079 0.98 MPMX20_02711 Long-chain-fatty-acid--CoA ligase 0.99 MPMX20_03357 Exopolyphosphatase low > 85
Klebsiella pneumoniae MKP103 0.96 KDGMDA_25120 long-chain-fatty-acid--CoA ligase FadD 0.90 KDGMDA_27820 exopolyphosphatase low > 95
Escherichia coli ECRC99 0.95 KEDOAH_01515 fadD long-chain-fatty-acid--CoA ligase FadD 0.87 KEDOAH_06425 ppx exopolyphosphatase — —
Escherichia coli ECRC98 0.95 JDDGAC_01170 fadD long-chain-fatty-acid--CoA ligase FadD 0.87 JDDGAC_25740 ppx exopolyphosphatase low > 87
Escherichia coli ECRC100 0.95 OKFHMN_26595 fadD long-chain-fatty-acid--CoA ligase FadD 0.87 OKFHMN_21795 ppx exopolyphosphatase low > 79
Escherichia coli ECRC102 0.95 NIAGMN_01470 fadD long-chain-fatty-acid--CoA ligase FadD 0.87 NIAGMN_19565 ppx exopolyphosphatase low > 80
Escherichia coli ECRC101 0.95 MCAODC_18815 fadD long-chain-fatty-acid--CoA ligase FadD 0.87 MCAODC_12325 ppx exopolyphosphatase low > 88
Escherichia coli ECOR38 0.95 HEPCGN_04985 fadD long-chain-fatty-acid--CoA ligase FadD 0.87 HEPCGN_20960 ppx exopolyphosphatase low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.95 OHPLBJKB_01928 Long-chain-fatty-acid--CoA ligase 0.87 OHPLBJKB_01224 Exopolyphosphatase low > 74
Escherichia coli ECOR27 0.95 NOLOHH_17115 fadD long-chain-fatty-acid--CoA ligase FadD 0.87 NOLOHH_13445 ppx exopolyphosphatase low > 76
Escherichia coli ECRC62 0.95 BNILDI_15900 fadD long-chain-fatty-acid--CoA ligase FadD 0.87 BNILDI_12255 ppx exopolyphosphatase low > 75
Klebsiella michiganensis M5al 0.95 BWI76_RS17800 long-chain-fatty-acid--CoA ligase 0.87 BWI76_RS21000 exopolyphosphatase low > 92
Escherichia fergusonii Becca 0.95 EFB2_02195 Long-chain-fatty-acid--CoA ligase 0.86 EFB2_01396 Exopolyphosphatase low > 86
Escherichia coli BL21 0.93 ECD_01775 acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) 0.87 ECD_02394 exopolyphosphatase low > 61
Escherichia coli Nissle 1917 0.93 ECOLIN_RS10040 long-chain-fatty-acid--CoA ligase FadD 0.87 ECOLIN_RS14205 exopolyphosphatase low > 55
Escherichia coli BW25113 0.93 b1805 fadD acyl-CoA synthase (NCBI) 0.87 b2502 ppx exopolyphosphatase (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF2820 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.88 GFF2166 Exopolyphosphatase (EC 3.6.1.11) low > 78
Rahnella sp. WP5 0.79 EX31_RS10600 long-chain-fatty-acid--CoA ligase FadD 0.77 EX31_RS22675 exopolyphosphatase low > 89
Serratia liquefaciens MT49 0.79 IAI46_14535 long-chain-fatty-acid--CoA ligase FadD 0.77 IAI46_18920 exopolyphosphatase low > 86
Erwinia amylovora T8 0.78 OLJFJH_13100 long-chain-fatty-acid--CoA ligase FadD 0.79 OLJFJH_10560 exopolyphosphatase low > 58
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13505_RS02670 long-chain-fatty-acid--CoA ligase FadD 0.80 PagCFBP13505_RS15040 exopolyphosphatase low > 74
Pectobacterium carotovorum WPP14 0.77 HER17_RS11275 long-chain-fatty-acid--CoA ligase FadD 0.77 HER17_RS06420 exopolyphosphatase low > 75
Pantoea sp. MT58 0.76 IAI47_08835 long-chain-fatty-acid--CoA ligase FadD 0.79 IAI47_05150 exopolyphosphatase low > 76
Dickeya dianthicola ME23 0.75 DZA65_RS11605 long-chain-fatty-acid--CoA ligase FadD 0.76 DZA65_RS16050 exopolyphosphatase low > 75
Dickeya dianthicola 67-19 0.75 HGI48_RS11260 long-chain-fatty-acid--CoA ligase FadD 0.75 HGI48_RS15230 exopolyphosphatase low > 71
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_09905 long-chain-fatty-acid--CoA ligase FadD 0.49 CSW01_03775 exopolyphosphatase low > 62
Shewanella sp. ANA-3 0.67 Shewana3_2386 long-chain-fatty-acid--CoA ligase (RefSeq) 0.32 Shewana3_2418 Ppx/GppA phosphatase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.67 Sama_1934 long-chain-fatty-acid--CoA ligase (RefSeq) 0.31 Sama_2012 guanosine-5'-triphosphate,3'-diphosphate diphosphatase (RefSeq) low > 62
Shewanella loihica PV-4 0.67 Shew_2188 long-chain-fatty-acid--CoA ligase (RefSeq) 0.29 Shew_3078 Ppx/GppA phosphatase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.65 SO2581 fadD-1 long-chain-fatty-acid--CoA ligase (NCBI ptt file) 0.33 SO2185 ppx exopolyphosphatase (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.61 MIT1002_02588 Long-chain-fatty-acid--CoA ligase 0.43 MIT1002_00871 Exopolyphosphatase low > 70
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_1573 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 0.35 B158DRAFT_2313 Exopolyphosphatase low > 40
Rhodanobacter sp. FW510-T8 0.59 OKGIIK_06445 menE,fadK long-chain-fatty-acid--CoA ligase 0.31 OKGIIK_03775 ppx exopolyphosphatase low > 53
Rhodanobacter sp000427505 FW510-R12 0.59 LRK53_RS09335 long-chain-fatty-acid--CoA ligase 0.30 LRK53_RS13600 Ppx/GppA family phosphatase low > 59
Rhodanobacter denitrificans MT42 0.59 LRK55_RS00570 long-chain-fatty-acid--CoA ligase 0.32 LRK55_RS14730 Ppx/GppA phosphatase family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS00795 long-chain-fatty-acid--CoA ligase 0.32 LRK54_RS15015 Ppx/GppA family phosphatase low > 59
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS02155 AMP-binding protein 0.30 ABZR86_RS00705 Ppx/GppA phosphatase family protein low > 74
Lysobacter sp. OAE881 0.58 ABIE51_RS11545 long-chain fatty acid--CoA ligase 0.32 ABIE51_RS14235 exopolyphosphatase low > 62
Dechlorosoma suillum PS 0.58 Dsui_3212 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II 0.33 Dsui_2813 exopolyphosphatase low > 51
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.2896.1 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.32 Xcc-8004.4065.1 Exopolyphosphatase (EC 3.6.1.11) low > 74
Castellaniella sp019104865 MT123 0.56 ABCV34_RS11410 AMP-binding protein 0.28 ABCV34_RS15575 Ppx/GppA phosphatase family protein low > 48
Ralstonia solanacearum GMI1000 0.55 RS_RS14290 long-chain-fatty-acid--CoA ligase 0.31 RS_RS07710 exopolyphosphatase low > 80
Pseudomonas sp. SVBP6 0.55 COO64_RS22015 fadD1 long-chain-fatty-acid--CoA ligase FadD1 0.35 COO64_RS01075 ppx exopolyphosphatase low > 93
Ralstonia solanacearum PSI07 0.55 RPSI07_RS10900 long-chain-fatty-acid--CoA ligase 0.31 RPSI07_RS15335 exopolyphosphatase low > 81
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS18150 long-chain fatty acid--CoA ligase 0.31 RR42_RS13430 exopolyphosphatase low > 128
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_03310 long-chain fatty acid--CoA ligase 0.36 AO353_08880 exopolyphosphatase low > 101
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS02020 long-chain fatty acid--CoA ligase 0.32 ABZR87_RS14060 exopolyphosphatase low > 80
Pseudomonas sp. BP01 0.55 JOY50_RS01310 fadD1 long-chain-fatty-acid--CoA ligase FadD1 0.36 JOY50_RS22540 ppx exopolyphosphatase low > 84
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_3834 AMP-dependent synthetase and ligase 0.37 Psyr_0294 Exopolyphosphatase low > 86
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_3834 AMP-dependent synthetase and ligase 0.37 Psyr_0294 Exopolyphosphatase low > 86
Ralstonia solanacearum UW163 0.55 UW163_RS07285 long-chain-fatty-acid--CoA ligase 0.31 UW163_RS15420 exopolyphosphatase — —
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS17295 long-chain fatty acid--CoA ligase 0.32 BPHYT_RS14105 exopolyphosphatase low > 109
Ralstonia solanacearum IBSBF1503 0.55 RALBFv3_RS06340 long-chain-fatty-acid--CoA ligase 0.31 RALBFv3_RS02110 exopolyphosphatase low > 76
Pseudomonas simiae WCS417 0.55 PS417_22065 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) 0.35 PS417_27425 exopolyphosphatase low > 88
Pseudomonas putida KT2440 0.55 PP_4549 long-chain-fatty-acid/CoA ligase 0.36 PP_5216 exopolyphosphatase low > 96
Marinobacter adhaerens HP15 0.55 HP15_1864 acyl-CoA synthase 0.35 HP15_228 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase low > 73
Pseudomonas sp. DMC3 0.55 GFF5130 Long-chain-fatty-acid--CoA ligase 0.36 GFF335 Exopolyphosphatase low > 89
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS19285 long-chain fatty acid--CoA ligase 0.24 HSERO_RS09440 exopolyphosphatase low > 78
Pseudomonas sp. RS175 0.55 PFR28_00585 Long-chain-fatty-acid--CoA ligase 0.36 PFR28_04344 Exopolyphosphatase low > 88
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_2872 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.36 Pf6N2E2_4454 Exopolyphosphatase (EC 3.6.1.11) 0.23 56
Pseudomonas lactucae CFBP13502 0.54 GEMAOFIL_04549 Long-chain-fatty-acid--CoA ligase 0.36 GEMAOFIL_05621 Exopolyphosphatase low > 93
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_06226 long-chain acyl-CoA synthetase 0.32 H281DRAFT_04419 Ppx/GppA phosphatase low > 103
Pseudomonas sp. S08-1 0.54 OH686_05750 Long-chain-fatty-acid--CoA ligase 0.36 OH686_11275 Exopolyphosphatase low > 80
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_1911 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.36 PfGW456L13_875 Exopolyphosphatase (EC 3.6.1.11) low > 87
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS22975 AMP-binding protein 0.31 QEN71_RS04855 exopolyphosphatase low > 153
Acidovorax sp. GW101-3H11 0.54 Ac3H11_663 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.30 Ac3H11_455 Exopolyphosphatase (EC 3.6.1.11) low > 79
Pseudomonas fluorescens SBW25 0.54 PFLU_RS23680 long-chain fatty acid--CoA ligase 0.36 PFLU_RS29090 exopolyphosphatase low > 109
Pseudomonas aeruginosa PA14 0.54 IKLFDK_16895 long-chain fatty acid--CoA ligase 0.36 IKLFDK_27255 exopolyphosphatase low > 100
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS23680 long-chain fatty acid--CoA ligase 0.36 PFLU_RS29090 exopolyphosphatase low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF2607 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.28 GFF4229 Exopolyphosphatase (EC 3.6.1.11) low > 90
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_05100 long-chain fatty acid--CoA ligase 0.36 AO356_12900 exopolyphosphatase 0.35 24
Echinicola vietnamensis KMM 6221, DSM 17526 0.54 Echvi_2567 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 0.16 Echvi_0477 Exopolyphosphatase low > 79
Pseudomonas stutzeri RCH2 0.54 Psest_1335 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) 0.36 Psest_3731 exopolyphosphatase low > 67
Pseudomonas segetis P6 0.54 MPMX49_03274 Long-chain-fatty-acid--CoA ligase 0.35 MPMX49_04502 Exopolyphosphatase low > 75
Variovorax sp. SCN45 0.52 GFF7283 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.29 GFF1091 Exopolyphosphatase (EC 3.6.1.11) low > 127
Variovorax sp. OAS795 0.52 ABID97_RS04445 long-chain-fatty-acid--CoA ligase 0.28 ABID97_RS14590 Ppx/GppA phosphatase family protein low > 91
Acinetobacter radioresistens SK82 0.51 MPMX26_00141 Long-chain-fatty-acid--CoA ligase 0.36 MPMX26_00569 Exopolyphosphatase low > 36
Acinetobacter baumannii LAC-4 0.50 RR41_RS17925 long-chain-fatty-acid--CoA ligase 0.36 RR41_RS15940 exopolyphosphatase low > 55
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_575 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.36 Pf1N1B4_2209 Exopolyphosphatase (EC 3.6.1.11) low > 87
Methylophilus sp. DMC18 0.16 GFF481 3-hydroxybenzoate--CoA/4-hydroxybenzoate--CoA ligase 0.29 GFF2755 Exopolyphosphatase — —
Synechococcus elongatus PCC 7942 0.11 Synpcc7942_0918 aas long-chain-fatty-acid CoA ligase 0.15 Synpcc7942_1965 ppx exopolyphosphatase low > 38
Synechocystis sp000284455 PCC 6803 0.09 SGL_RS04190 AMP-binding protein 0.16 SGL_RS17865 Ppx/GppA phosphatase family protein low > 52

Not shown: 30 genomes with orthologs for EX28DRAFT_0753 only; 3 genomes with orthologs for EX28DRAFT_0165 only