Conservation of cofitness between ECD_03509 and ECD_03828 in Escherichia coli BL21

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03509 ATP-dependent DNA helicase 1.0 ECD_03828 catalase-peroxidase HPI, heme b-containing 0.73 17
Escherichia coli BW25113 1.00 b3652 recG ATP-dependent DNA helicase (NCBI) 1.00 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_04090 recG ATP-dependent DNA helicase RecG 1.00 BNILDI_05730 katG catalase/peroxidase HPI — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00049 ATP-dependent DNA helicase RecG 1.00 OHPLBJKB_04108 Catalase-peroxidase low > 73
Escherichia coli Nissle 1917 0.99 ECOLIN_RS20800 ATP-dependent DNA helicase RecG 1.00 ECOLIN_RS22765 catalase/peroxidase HPI low > 52
Escherichia fergusonii Becca 0.99 EFB2_00136 ATP-dependent DNA helicase RecG 1.00 EFB2_04671 Catalase-peroxidase low > 86
Escherichia coli ECOR27 0.99 NOLOHH_07425 recG ATP-dependent DNA helicase RecG 1.00 NOLOHH_05805 katG catalase/peroxidase HPI low > 57
Escherichia coli ECRC98 0.99 JDDGAC_19170 recG ATP-dependent DNA helicase RecG 1.00 JDDGAC_17285 katG catalase/peroxidase HPI — —
Escherichia coli ECRC101 0.99 MCAODC_06055 recG ATP-dependent DNA helicase RecG 1.00 MCAODC_04160 katG catalase/peroxidase HPI — —
Escherichia coli ECRC102 0.99 NIAGMN_13305 recG ATP-dependent DNA helicase RecG 1.00 NIAGMN_11415 katG catalase/peroxidase HPI — —
Escherichia coli ECRC101 0.99 OKFHMN_15545 recG ATP-dependent DNA helicase RecG 1.00 OKFHMN_13660 katG catalase/peroxidase HPI — —
Escherichia coli ECOR38 0.99 HEPCGN_14365 recG ATP-dependent DNA helicase RecG 1.00 HEPCGN_12305 katG catalase/peroxidase HPI low > 85
Escherichia coli ECRC99 0.99 KEDOAH_12600 recG ATP-dependent DNA helicase RecG 1.00 KEDOAH_14500 katG catalase/peroxidase HPI — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.91 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.87 EX28DRAFT_4414 catalase/peroxidase HPI low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_00084 ATP-dependent DNA helicase RecG 0.87 MPMX20_04528 Catalase-peroxidase low > 85
Klebsiella michiganensis M5al 0.91 BWI76_RS27440 DNA helicase RecG 0.81 BWI76_RS13925 catalase/peroxidase HPI low > 92
Serratia liquefaciens MT49 0.84 IAI46_24905 ATP-dependent DNA helicase RecG 0.61 IAI46_17030 catalase/peroxidase HPI low > 86
Pantoea sp. MT58 0.84 IAI47_00500 ATP-dependent DNA helicase RecG 0.80 IAI47_07215 catalase/peroxidase HPI low > 76
Pectobacterium carotovorum WPP14 0.82 HER17_RS21395 ATP-dependent DNA helicase RecG 0.56 HER17_RS09165 catalase/peroxidase HPI low > 75
Erwinia tracheiphila SCR3 0.82 LU632_RS22190 recG ATP-dependent DNA helicase RecG 0.81 LU632_RS19500 katG catalase/peroxidase HPI — —
Dickeya dadantii 3937 0.80 DDA3937_RS00170 ATP-dependent DNA helicase RecG 0.61 DDA3937_RS07265 catalase/peroxidase HPI low > 74
Rahnella sp. WP5 0.80 EX31_RS15820 ATP-dependent DNA helicase RecG 0.81 EX31_RS11140 catalase/peroxidase HPI low > 89
Dickeya dianthicola 67-19 0.80 HGI48_RS21190 ATP-dependent DNA helicase RecG 0.61 HGI48_RS08090 catalase/peroxidase HPI low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS22160 ATP-dependent DNA helicase RecG 0.62 DZA65_RS08685 catalase/peroxidase HPI low > 75
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_13680 DNA helicase RecG 0.58 CSW01_07835 catalase-peroxidase low > 62
Shewanella amazonensis SB2B 0.65 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) 0.55 Sama_0745 catalase (RefSeq) low > 62
Shewanella sp. ANA-3 0.65 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) 0.54 Shewana3_0306 catalase/peroxidase HPI (RefSeq) low > 73
Shewanella loihica PV-4 0.64 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.50 Shew_0709 catalase/peroxidase HPI (RefSeq) low > 60
Shewanella oneidensis MR-1 0.64 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) 0.55 SO4405 katG-2 catalase/peroxidase HPI (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.62 MIT1002_00111 ATP-dependent DNA helicase RecG 0.51 MIT1002_03345 Catalase-peroxidase 2 precursor low > 70
Pseudomonas stutzeri RCH2 0.55 Psest_4192 ATP-dependent DNA helicase RecG 0.58 Psest_2741 catalase/peroxidase HPI — —
Pseudomonas putida KT2440 0.55 PP_5310 junction-specific ATP-dependent DNA helicase 0.60 PP_3668 Catalase-peroxidase low > 96
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.58 Pf1N1B4_4230 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 87
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_09320 ATP-dependent DNA helicase RecG 0.60 AO353_23210 hydroperoxidase low > 101
Marinobacter adhaerens HP15 0.54 HP15_309 DNA helicase, ATP-dependent, RecG 0.56 HP15_1397 peroxidase/catalase HPI low > 73
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.61 Pf6N2E2_3430 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 103
Pseudomonas sp. S08-1 0.54 OH686_13505 ATP-dependent DNA helicase RecG 0.69 OH686_15490 catalase/peroxidase HPI 0.39 76
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_12380 ATP-dependent DNA helicase RecG 0.61 AO356_07735 hydroperoxidase low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_0201 ATP-dependent DNA helicase RecG 0.60 Psyr_4208 heme catalase/peroxidase low > 86
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_0201 ATP-dependent DNA helicase RecG 0.60 Psyr_4208 heme catalase/peroxidase low > 86
Lysobacter sp. OAE881 0.53 ABIE51_RS17230 ATP-dependent DNA helicase RecG 0.60 ABIE51_RS07780 catalase/peroxidase HPI low > 62
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.60 ABZR86_RS00615 catalase/peroxidase HPI low > 74
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.60 Xcc-8004.3762.1 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 74
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_0566 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.55 B158DRAFT_0317 catalase/peroxidase HPI low > 40
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS03400 ATP-dependent DNA helicase RecG 0.62 BPHYT_RS10310 catalase-peroxidase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_04672 ATP-dependent DNA helicase RecG 0.60 H281DRAFT_00053 catalase-peroxidase low > 103
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS26630 ATP-dependent DNA helicase RecG 0.61 QEN71_RS29740 catalase/peroxidase HPI — —
Ralstonia solanacearum UW163 0.44 UW163_RS07950 DNA helicase RecG 0.61 UW163_RS00460 catalase/peroxidase HPI — —
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS05675 DNA helicase RecG 0.61 RALBFv3_RS13105 catalase/peroxidase HPI low > 76
Ralstonia solanacearum PSI07 0.44 RPSI07_RS11625 DNA helicase RecG 0.61 RPSI07_RS20110 catalase/peroxidase HPI low > 81
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS17390 ATP-dependent DNA helicase RecG 0.61 RR42_RS26270 hydroperoxidase low > 128
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS01270 ATP-dependent DNA helicase RecG 0.66 ABZR87_RS01240 catalase/peroxidase HPI low > 80
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS06165 ATP-dependent DNA helicase RecG 0.61 HSERO_RS06245 catalase-peroxidase 0.49 22
Acidovorax sp. GW101-3H11 0.44 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.58 Ac3H11_135 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.68 GFF637 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 90
Dechlorosoma suillum PS 0.41 Dsui_0311 ATP-dependent DNA helicase RecG 0.58 Dsui_2233 catalase/peroxidase HPI low > 51
Variovorax sp. SCN45 0.38 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.60 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) low > 127
Rhizobium sp. OAE497 0.34 ABIE40_RS09300 ATP-dependent DNA helicase RecG 0.57 ABIE40_RS15040 catalase/peroxidase HPI low > 107
Agrobacterium fabrum C58 0.34 Atu1780 ATP-dependent DNA helicase 0.54 Atu4642 catalase — —
Azospirillum sp. SherDot2 0.34 MPMX19_00951 ATP-dependent DNA helicase RecG 0.58 MPMX19_03084 Catalase-peroxidase — —
Phaeobacter inhibens DSM 17395 0.34 PGA1_c14380 ATP-dependent DNA helicase RecG 0.51 PGA1_78p00050 peroxidase/catalase HPI low > 62
Sinorhizobium meliloti 1021 0.33 SMc00228 ATP-dependent DNA helicase RecG 0.58 SMa2379 KatB catalase/peroxidase low > 103
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_1079 recG ATP-dependent DNA helicase RecG 0.56 Synpcc7942_1656 katG catalase/peroxidase HPI — —
Dinoroseobacter shibae DFL-12 0.32 Dshi_1510 DEAD/DEAH box helicase domain protein (RefSeq) 0.50 Dshi_3801 catalase/peroxidase HPI (RefSeq) low > 64
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_1162 ATP-dependent DNA helicase RecG 0.64 Echvi_1165 catalase/peroxidase HPI low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.31 CA265_RS22835 ATP-dependent DNA helicase RecG 0.60 CA265_RS00900 catalase/peroxidase HPI low > 88
Caulobacter crescentus NA1000 0.31 CCNA_01504 ATP-dependent DNA helicase recG 0.57 CCNA_03138 peroxidase/catalase katG 0.81 4
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_01504 ATP-dependent DNA helicase recG 0.57 CCNA_03138 peroxidase/catalase katG low > 67
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_0958 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.51 Ga0059261_3628 catalase/peroxidase HPI low > 68
Bosea sp. OAE506 0.30 ABIE41_RS15815 ATP-dependent DNA helicase RecG 0.52 ABIE41_RS01200 catalase/peroxidase HPI 0.44 17
Rhodopseudomonas palustris CGA009 0.30 TX73_013795 ATP-dependent DNA helicase RecG 0.60 TX73_002230 catalase/peroxidase HPI low > 86
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS17240 ATP-dependent DNA helicase RecG 0.58 ABZR88_RS16460 catalase/peroxidase HPI low > 71
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS04765 ATP-dependent DNA helicase RecG 0.63 A4249_RS12750 catalase/peroxidase HPI low > 48
Mycobacterium tuberculosis H37Rv 0.25 Rv2973c Probable ATP-dependent DNA helicase RecG 0.51 Rv1908c Catalase-peroxidase-peroxynitritase T KatG low > 58

Not shown: 23 genomes with orthologs for ECD_03509 only; 0 genomes with orthologs for ECD_03828 only