Conservation of cofitness between ECD_03941 and ECD_03665 in Escherichia coli BL21

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03941 acetyl-CoA synthetase 1.0 ECD_03665 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase low > 61
Escherichia coli ECOR27 1.00 NOLOHH_05080 acs acetate--CoA ligase 1.00 NOLOHH_06700 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 75
Escherichia coli BW25113 1.00 b4069 acs acetyl-coenzyme A synthetase (NCBI) 1.00 b3787 rffD UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_06445 acs acetate--CoA ligase 1.00 BNILDI_04825 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03971 Acetyl-coenzyme A synthetase 1.00 OHPLBJKB_04267 UDP-N-acetyl-D-mannosamine dehydrogenase low > 73
Escherichia coli ECOR38 1.00 HEPCGN_11455 acs acetate--CoA ligase 1.00 HEPCGN_13275 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 87
Escherichia coli ECRC99 0.99 KEDOAH_15320 acs acetate--CoA ligase 1.00 KEDOAH_13585 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia coli ECRC100 0.99 OKFHMN_12830 acs acetate--CoA ligase 1.00 OKFHMN_14565 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 80
Escherichia coli ECRC101 0.99 MCAODC_03340 acs acetate--CoA ligase 1.00 MCAODC_05070 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 87
Escherichia coli ECRC98 0.99 JDDGAC_16465 acs acetate--CoA ligase 1.00 JDDGAC_18190 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 86
Escherichia coli ECRC102 0.99 NIAGMN_10675 acs acetate--CoA ligase 1.00 NIAGMN_12320 wecC UDP-N-acetyl-D-mannosamine dehydrogenase — —
Escherichia fergusonii Becca 0.99 EFB2_04520 Acetyl-coenzyme A synthetase 0.99 EFB2_04852 UDP-N-acetyl-D-mannosamine dehydrogenase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS23550 acetate--CoA ligase 0.99 ECOLIN_RS21740 UDP-N-acetyl-D-mannosamine dehydrogenase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF1452 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.87 GFF2886 UDP-glucose dehydrogenase (EC 1.1.1.22) 0.41 12
Enterobacter asburiae PDN3 0.95 EX28DRAFT_4232 acetate--CoA ligase 0.89 EX28DRAFT_4457 nucleotide sugar dehydrogenase 0.70 12
Enterobacter sp. TBS_079 0.94 MPMX20_00291 Acetyl-coenzyme A synthetase 0.89 MPMX20_04486 UDP-N-acetyl-D-mannosamine dehydrogenase low > 85
Klebsiella michiganensis M5al 0.94 BWI76_RS02095 acetyl-coenzyme A synthetase 0.89 BWI76_RS01095 UDP-N-acetyl-D-mannosamine dehydrogenase low > 92
Rahnella sp. WP5 0.87 EX31_RS09040 acetate--CoA ligase 0.81 EX31_RS15070 UDP-N-acetyl-D-mannosamine dehydrogenase low > 89
Pantoea sp. MT58 0.87 IAI47_17715 acetate--CoA ligase 0.74 IAI47_18505 UDP-N-acetyl-D-mannosamine dehydrogenase low > 76
Erwinia tracheiphila SCR3 0.86 LU632_RS23305 acs acetate--CoA ligase 0.77 LU632_RS24235 wecC UDP-N-acetyl-D-mannosamine dehydrogenase low > 74
Pectobacterium carotovorum WPP14 0.86 HER17_RS17630 acetate--CoA ligase 0.82 HER17_RS01160 UDP-N-acetyl-D-mannosamine dehydrogenase 0.75 9
Serratia liquefaciens MT49 0.86 IAI46_01405 acetate--CoA ligase 0.84 IAI46_00605 UDP-N-acetyl-D-mannosamine dehydrogenase low > 86
Dickeya dadantii 3937 0.85 DDA3937_RS03480 acetate--CoA ligase 0.71 DDA3937_RS20050 UDP-N-acetyl-D-mannosamine dehydrogenase low > 74
Dickeya dianthicola 67-19 0.85 HGI48_RS03580 acetate--CoA ligase 0.68 HGI48_RS20195 UDP-N-acetyl-D-mannosamine dehydrogenase low > 71
Dickeya dianthicola ME23 0.85 DZA65_RS03695 acetate--CoA ligase 0.70 DZA65_RS21240 UDP-N-acetyl-D-mannosamine dehydrogenase low > 75
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_01520 acetyl-coenzyme A synthetase 0.63 CSW01_04710 UDP-N-acetyl-D-mannosamine dehydrogenase low > 62
Shewanella oneidensis MR-1 0.72 SO2743 acs acetyl-coenzyme A synthetase (NCBI ptt file) 0.18 SO3190 polysaccharide biosynthesis protein (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.72 HP15_811 acetyl-CoA synthetase 0.62 HP15_2381 UDP-glucose 6-dehydrogenase low > 73
Shewanella amazonensis SB2B 0.71 Sama_2079 acetyl-CoA synthetase (RefSeq) 0.16 Sama_2260 UDP-glucose/GDP-mannose dehydrogenase (RefSeq) low > 62
Pseudomonas sp. RS175 0.71 PFR28_03289 Acetyl-coenzyme A synthetase 0.69 PFR28_00917 UDP-N-acetyl-D-mannosamine dehydrogenase low > 88
Pseudomonas sp. S08-1 0.71 OH686_21250 acetate--CoA ligase 0.67 OH686_14390 UDP-N-acetyl-D-mannosamine dehydrogenase low > 80
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_5659 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.19 Pf6N2E2_125 UDP-glucose dehydrogenase (EC 1.1.1.22) low > 103
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_18695 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) 0.25 AO356_03420 UDP-N-acetyl-D-glucosamine dehydrogenase low > 104
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_3572 acetyl-coenzyme A synthetase 0.15 Psyr_2696 UDP-glucose 6-dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_3572 acetyl-coenzyme A synthetase 0.15 Psyr_2696 UDP-glucose 6-dehydrogenase low > 86
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_3430 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.18 Pf1N1B4_5884 UDP-glucose dehydrogenase (EC 1.1.1.22) low > 87
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_1963 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.72 PfGW456L13_3996 UDP-glucose dehydrogenase (EC 1.1.1.22) low > 87
Magnetospirillum magneticum AMB-1 0.69 AMB_RS21140 acetate--CoA ligase 0.20 AMB_RS00730 nucleotide sugar dehydrogenase — —
Azospirillum brasilense Sp245 0.67 AZOBR_RS00270 acetyl-CoA synthetase 0.24 AZOBR_RS23650 UDP-N-acetyl-D-glucosamine dehydrogenase low > 97
Rhodopseudomonas palustris CGA009 0.67 TX73_001095 acetate--CoA ligase 0.17 TX73_020820 UDP-glucose/GDP-mannose dehydrogenase family protein — —
Bosea sp. OAE506 0.67 ABIE41_RS05675 acetate--CoA ligase 0.25 ABIE41_RS14415 nucleotide sugar dehydrogenase low > 77
Rhodospirillum rubrum S1H 0.66 Rru_A3575 Acetate--CoA ligase (NCBI) 0.19 Rru_A2116 UDP-glucose 6-dehydrogenase (NCBI) — —
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS15200 acetate--CoA ligase 0.18 ABZR86_RS16180 Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB low > 74
Azospirillum sp. SherDot2 0.65 MPMX19_02038 Acetyl-coenzyme A synthetase 0.23 MPMX19_06712 UDP-N-acetyl-D-glucosamine 6-dehydrogenase low > 112
Acinetobacter radioresistens SK82 0.65 MPMX26_02906 Acetyl-coenzyme A synthetase 0.19 MPMX26_00050 UDP-N-acetyl-D-glucosamine 6-dehydrogenase low > 36
Rhodanobacter denitrificans MT42 0.65 LRK55_RS08185 acetate--CoA ligase 0.18 LRK55_RS11695 nucleotide sugar dehydrogenase low > 63
Rhodanobacter denitrificans FW104-10B01 0.65 LRK54_RS08420 acetate--CoA ligase 0.18 LRK54_RS11970 nucleotide sugar dehydrogenase low > 59
Rhizobium sp. OAE497 0.64 ABIE40_RS19160 acetate--CoA ligase 0.23 ABIE40_RS19745 nucleotide sugar dehydrogenase low > 107
Sinorhizobium meliloti 1021 0.64 SMc04093 acetyl-CoA synthetase 0.25 SM_b21051 udpglucosegdpmannose dehydrogenase low > 103
Agrobacterium fabrum C58 0.64 Atu2745 acetyl-coenzyme A synthetase 0.23 Atu2582 UDP-glucose/GDP-mannose dehydrogenase low > 89
Rhodanobacter sp. FW510-T8 0.63 OKGIIK_15190 acs acetate--CoA ligase 0.19 OKGIIK_11915 wecC Vi polysaccharide biosynthesis protein VipA/TviB low > 52
Xanthomonas campestris pv. campestris strain 8004 0.63 Xcc-8004.5157.1 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.20 Xcc-8004.2607.1 Polysaccharide biosynthetic protein 0.30 65
Lysobacter sp. OAE881 0.63 ABIE51_RS01660 acetate--CoA ligase 0.17 ABIE51_RS12425 nucleotide sugar dehydrogenase low > 62
Sphingomonas koreensis DSMZ 15582 0.62 Ga0059261_1313 acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.49 Ga0059261_3101 nucleotide sugar dehydrogenase low > 68
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_0063 acetate--CoA ligase 0.65 B158DRAFT_2353 nucleotide sugar dehydrogenase low > 40
Brevundimonas sp. GW460-12-10-14-LB2 0.62 A4249_RS15190 acetate--CoA ligase 0.20 A4249_RS02200 UDP-glucose/GDP-mannose dehydrogenase family protein — —
Phaeobacter inhibens DSM 17395 0.60 PGA1_c12950 acetyl-coenzyme A synthetase Acs 0.19 PGA1_262p02300 UDP-glucose/GDP-mannose dehydrogenase low > 62
Desulfovibrio vulgaris Hildenborough JW710 0.55 DVU2969 acetoacetyl-CoA synthase (TIGR) 0.18 DVU3176 UDP-glucose/GDP-mannose dehydrogenase family protein (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.55 DvMF_1775 acetate/CoA ligase (RefSeq) 0.17 DvMF_2494 nucleotide sugar dehydrogenase (RefSeq) low > 51
Pedobacter sp. GW460-11-11-14-LB5 0.54 CA265_RS16340 acetate--CoA ligase 0.20 CA265_RS19305 Vi polysaccharide biosynthesis protein VipA/TviB low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.52 Echvi_1268 acetate--CoA ligase 0.19 Echvi_4400 nucleotide sugar dehydrogenase low > 79
Mucilaginibacter yixingensis YX-36 DSM 26809 0.52 ABZR88_RS15400 acetate--CoA ligase 0.18 ABZR88_RS08975 nucleotide sugar dehydrogenase low > 71
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS23765 acetate--CoA ligase 0.63 QEN71_RS40735 UDP-N-acetyl-D-mannosamine dehydrogenase low > 153
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS14360 acetate--CoA ligase 0.16 ABZR87_RS16430 nucleotide sugar dehydrogenase low > 80
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS07770 acetyl-CoA synthetase 0.18 HSERO_RS20970 NDP-N-acetyl-D-mannosaminuronate dehydrogenase low > 78
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS07000 acetyl-CoA synthetase 0.65 BPHYT_RS29845 UDP-N-acetyl-D-mannosamine dehydrogenase — —
Ralstonia solanacearum GMI1000 0.47 RS_RS09815 acetyl-coenzyme A synthetase 0.65 RS_RS22025 UDP-N-acetyl-D-mannosamine dehydrogenase low > 80
Paraburkholderia graminis OAS925 0.47 ABIE53_001664 acetyl-CoA synthetase 0.17 ABIE53_000508 UDP-N-acetyl-D-galactosamine dehydrogenase low > 113
Ralstonia solanacearum PSI07 0.47 RPSI07_RS14880 acetate--CoA ligase 0.65 RPSI07_RS04505 UDP-N-acetyl-D-mannosamine dehydrogenase low > 81
Variovorax sp. OAS795 0.47 ABID97_RS27430 acetate--CoA ligase 0.18 ABID97_RS02195 nucleotide sugar dehydrogenase low > 91
Ralstonia solanacearum UW163 0.47 UW163_RS11280 acetate--CoA ligase 0.66 UW163_RS20035 UDP-N-acetyl-D-mannosamine dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS02445 acetate--CoA ligase 0.66 RALBFv3_RS19095 UDP-N-acetyl-D-mannosamine dehydrogenase low > 76
Methanococcus maripaludis JJ 0.45 MMJJ_RS04645 acetate--CoA ligase 0.39 MMJJ_RS01355 UDP-N-acetyl-D-mannosamine dehydrogenase low > 28
Methanococcus maripaludis S2 0.44 MMP_RS00845 acetate--CoA ligase 0.39 MMP_RS03695 UDP-N-acetyl-D-mannosamine dehydrogenase — —
Bacteroides thetaiotaomicron VPI-5482 0.16 BT3755 acetyl-coenzyme A synthetase (NCBI ptt file) 0.49 BT2945 UDP-N-acetyl-D-mannosamine dehydrogenase (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.15 HMPREF1078_RS10645 AMP-binding protein 0.49 HMPREF1078_RS16035 UDP-N-acetyl-D-mannosamine dehydrogenase low > 61

Not shown: 24 genomes with orthologs for ECD_03941 only; 2 genomes with orthologs for ECD_03665 only